BLASTX nr result

ID: Cheilocostus21_contig00010256 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00010256
         (708 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009407397.1| PREDICTED: uncharacterized protein LOC103990...   126   1e-30
ref|XP_009380112.1| PREDICTED: extensin-2-like [Musa acuminata s...    63   8e-08

>ref|XP_009407397.1| PREDICTED: uncharacterized protein LOC103990091 [Musa acuminata
           subsp. malaccensis]
          Length = 392

 Score =  126 bits (316), Expect = 1e-30
 Identities = 82/189 (43%), Positives = 103/189 (54%), Gaps = 44/189 (23%)
 Frame = +2

Query: 32  QRTPPVKYVEDRHQPS-HLLPENQYGSDHLSHVTPLELRYIREAH-------SPR----- 172
           Q+ P V YVE+++ PS HL PE QY SDH+SHVTPLELRYIR+AH        PR     
Sbjct: 206 QQAPSVTYVEEQYHPSPHLPPEEQYRSDHMSHVTPLELRYIRQAHVSDSYAIEPRKVPPP 265

Query: 173 -------------ADPYQVESTRSHYCEIPTHPDRLVYRLVPETLPNPLLPRDPAM-RGY 310
                         DPYQ E+ R++Y E P   +RL YRLVPE     ++PRDP + R Y
Sbjct: 266 GVSASVPYYQASVVDPYQAETMRAYYPENPVRTERLTYRLVPE-----IIPRDPLLSRDY 320

Query: 311 HTV--REGDIFPNTERR--IYDGSIDHRTADLEDRN-------------HRRVANAPISS 439
           HTV  REG+I  + ER   IY+    +     ED N                ++NAP+SS
Sbjct: 321 HTVTAREGEIISHAERMEGIYNSQPSYVPGGYEDPNRAYSGISQRPISSRHAMSNAPVSS 380

Query: 440 RYTFAGANR 466
           RY+FAGA R
Sbjct: 381 RYSFAGAPR 389


>ref|XP_009380112.1| PREDICTED: extensin-2-like [Musa acuminata subsp. malaccensis]
 ref|XP_018675233.1| PREDICTED: extensin-2-like [Musa acuminata subsp. malaccensis]
          Length = 570

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 44/104 (42%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
 Frame = +2

Query: 176 DPYQVESTRSHYCEIPTHPDRLVYRLVPETLP-NPLLPRDPAMRGYHTV--REGDIFPNT 346
           D YQVES R++Y E P    R+ YR+VPE +P +PLL RD     Y TV  REG + P T
Sbjct: 477 DQYQVESVRAYYPENPVPSARIRYRMVPEIIPSDPLLARD-----YDTVTSREGGLAPQT 531

Query: 347 ERRIYDG--SIDHRTADLEDRNHRRVANAPISSRYTFAGANRYR 472
           +R   D   + DH T+     +    ++ P+SS Y F GA  YR
Sbjct: 532 DRAADDELYNPDHATS-----SRVAASSMPVSSVYPFVGAMPYR 570


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