BLASTX nr result

ID: Cheilocostus21_contig00009989 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00009989
         (583 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009395372.1| PREDICTED: zinc finger CCCH domain-containin...    97   6e-20
ref|XP_009395393.1| PREDICTED: zinc finger CCCH domain-containin...    90   3e-17

>ref|XP_009395372.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Musa
            acuminata subsp. malaccensis]
          Length = 2137

 Score = 97.4 bits (241), Expect = 6e-20
 Identities = 74/211 (35%), Positives = 103/211 (48%), Gaps = 17/211 (8%)
 Frame = -1

Query: 583  RSITNSFRELSSGSAQHVLEQTSISDGGKSHPTAAPSSYDTVSTGQTIASTHEQSTSEIL 404
            R I+NS REL S S+Q V EQT  S GG+S   A+ S+ DTV  GQ    +H     +  
Sbjct: 1653 RGISNSLRELGSFSSQSVPEQTVTSGGGQSL-AASLSAPDTVFLGQATNLSHHPDKVDAA 1711

Query: 403  SSEYNQLTPSKLSDTHNRLLLQQEQNDPDKQLLRMHDLPSDGSRSNAENAG--------- 251
             S   + +  +LS       L Q Q+D  K+ LR     +D +R  +E            
Sbjct: 1712 GSFQKKNSELELS------FLLQSQHDHGKESLRTRGRSADETRKKSERLSIKLDTSVSS 1765

Query: 250  ----GKTLFTEVDNLAPAVNSKIIQADS----ACMVGSLDKQMYQSSAVSYPASHFKPEK 95
                 K   TEV N+ PA +S I +ADS      + G LD Q++Q+   SYP S    EK
Sbjct: 1766 EDPKEKFHATEVGNITPAASSNIYKADSERNPVPLTGFLDNQIHQALTTSYPGSDLMSEK 1825

Query: 94   ILPETPDVGTHPTEEMTAKLFVQPDAIESCS 2
            +    P++  HP+ +  + LFVQ DA+ES S
Sbjct: 1826 VSSRAPNLSAHPS-DAASNLFVQSDALESSS 1855


>ref|XP_009395393.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Musa
            acuminata subsp. malaccensis]
          Length = 1988

 Score = 89.7 bits (221), Expect = 3e-17
 Identities = 63/203 (31%), Positives = 93/203 (45%), Gaps = 43/203 (21%)
 Frame = -1

Query: 505  GGKSHPTAAPSSYDTVSTGQTIASTHEQSTSEILSSEYNQLTPSKLSDTHNRLLLQQEQN 326
            GG S            S    +  +H  + S ILSSE++QL+ S+  D  + L +   Q+
Sbjct: 1435 GGSSSTKIGAGLCSNQSLEMKMILSHRPAASGILSSEHDQLSSSQSDDRQDHLFVLHGQH 1494

Query: 325  DPDKQLLRMHDLPSDGSRSNAENAGGKTLF------------------------------ 236
            DPDK+LLR+HD  SD +   ++ +G  + F                              
Sbjct: 1495 DPDKELLRVHDRSSDETTRKSDGSGRNSDFVACAQRGTSVSSVCFHPERLSFQLETSDPS 1554

Query: 235  ---------TEVDNLAPAVNSKIIQAD----SACMVGSLDKQMYQSSAVSYPASHFKPEK 95
                     TEV+NLAPA +SKI + D    SA +  S+D Q++Q+  + YP S+  PE 
Sbjct: 1555 KDPKENTHVTEVENLAPAASSKIFRVDSMRNSAPLAVSVDNQLHQTLTIPYPGSNLVPE- 1613

Query: 94   ILPETPDVGTHPTEEMTAKLFVQ 26
            +  E PD+  HP+    A LFVQ
Sbjct: 1614 VSSEAPDLSAHPS-NAAANLFVQ 1635


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