BLASTX nr result

ID: Cheilocostus21_contig00009272 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00009272
         (402 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009402732.1| PREDICTED: HMG-Y-related protein A-like [Mus...    83   3e-16
ref|XP_017698890.1| PREDICTED: HMG-Y-related protein A-like isof...    62   1e-08
ref|XP_008792960.1| PREDICTED: HMG-Y-related protein A-like isof...    62   1e-08
ref|XP_008792959.1| PREDICTED: HMG-Y-related protein A-like isof...    62   2e-08
ref|XP_010926660.1| PREDICTED: HMG-Y-related protein A-like [Ela...    61   2e-08
ref|XP_010911308.1| PREDICTED: LOW QUALITY PROTEIN: histone H1E,...    59   4e-08

>ref|XP_009402732.1| PREDICTED: HMG-Y-related protein A-like [Musa acuminata subsp.
           malaccensis]
          Length = 286

 Score = 82.8 bits (203), Expect = 3e-16
 Identities = 53/123 (43%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
 Frame = -1

Query: 393 KTPGLPQKATVLDAALSSEKKKRGRPPKALADATQFAEKRRPGRPPKAATPVVXXXXXXX 214
           + PG P KA+ L +A S E +KRGRPPKA   A Q    R+ GRPPKAAT          
Sbjct: 162 RKPGRPSKAS-LASAQSGETRKRGRPPKASVAAAQSGGTRKRGRPPKAATKDASSALKRK 220

Query: 213 XXXXXXXXXXXXXXK------RGRPKKISQLPRDHGIAFQNNVAAGIAIVMPIIKRRGRP 52
                                RGRPKK   L +  G+  QNNVA G   V P  KRRGRP
Sbjct: 221 PGRPPGSAASTPKPGGTPQKRRGRPKKPQPLDQQQGVPSQNNVARGTETVTPTEKRRGRP 280

Query: 51  PKK 43
           PKK
Sbjct: 281 PKK 283


>ref|XP_017698890.1| PREDICTED: HMG-Y-related protein A-like isoform X3 [Phoenix
           dactylifera]
          Length = 274

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 50/140 (35%), Positives = 61/140 (43%), Gaps = 20/140 (14%)
 Frame = -1

Query: 393 KTPGLPQKATVLDAALSSEKKKRGRPP---------------KALADATQFAE--KRRPG 265
           + PG P KA  +   ++ EKKKRGRPP               KA A A + A   KR+PG
Sbjct: 110 RKPGRPPKAAKVAPPMAGEKKKRGRPPKSAMPSVLPKRSKPDKAPAAAARAAPDGKRKPG 169

Query: 264 RPPK--AATPVVXXXXXXXXXXXXXXXXXXXXXKRGRPKKISQLPRDH-GIAFQNNVAAG 94
           RP K  AA   V                      RGRPKK +  P        Q   A G
Sbjct: 170 RPRKNTAAAAAV----PNDNASAAAPSGEKQKRGRGRPKKAAAPPLPKPAERSQEKAAGG 225

Query: 93  IAIVMPIIKRRGRPPKKTGV 34
               +P++KRRGRPPKK+ V
Sbjct: 226 NEAAVPVVKRRGRPPKKSNV 245


>ref|XP_008792960.1| PREDICTED: HMG-Y-related protein A-like isoform X2 [Phoenix
           dactylifera]
          Length = 276

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 50/140 (35%), Positives = 61/140 (43%), Gaps = 20/140 (14%)
 Frame = -1

Query: 393 KTPGLPQKATVLDAALSSEKKKRGRPP---------------KALADATQFAE--KRRPG 265
           + PG P KA  +   ++ EKKKRGRPP               KA A A + A   KR+PG
Sbjct: 110 RKPGRPPKAAKVAPPMAGEKKKRGRPPKSAMPSVLPKRSKPDKAPAAAARAAPDGKRKPG 169

Query: 264 RPPK--AATPVVXXXXXXXXXXXXXXXXXXXXXKRGRPKKISQLPRDH-GIAFQNNVAAG 94
           RP K  AA   V                      RGRPKK +  P        Q   A G
Sbjct: 170 RPRKNTAAAAAV----PNDNASAAAPSGEKQKRGRGRPKKAAAPPLPKPAERSQEKAAGG 225

Query: 93  IAIVMPIIKRRGRPPKKTGV 34
               +P++KRRGRPPKK+ V
Sbjct: 226 NEAAVPVVKRRGRPPKKSNV 245


>ref|XP_008792959.1| PREDICTED: HMG-Y-related protein A-like isoform X1 [Phoenix
           dactylifera]
          Length = 282

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 50/140 (35%), Positives = 61/140 (43%), Gaps = 20/140 (14%)
 Frame = -1

Query: 393 KTPGLPQKATVLDAALSSEKKKRGRPP---------------KALADATQFAE--KRRPG 265
           + PG P KA  +   ++ EKKKRGRPP               KA A A + A   KR+PG
Sbjct: 110 RKPGRPPKAAKVAPPMAGEKKKRGRPPKSAMPSVLPKRSKPDKAPAAAARAAPDGKRKPG 169

Query: 264 RPPK--AATPVVXXXXXXXXXXXXXXXXXXXXXKRGRPKKISQLPRDH-GIAFQNNVAAG 94
           RP K  AA   V                      RGRPKK +  P        Q   A G
Sbjct: 170 RPRKNTAAAAAV----PNDNASAAAPSGEKQKRGRGRPKKAAAPPLPKPAERSQEKAAGG 225

Query: 93  IAIVMPIIKRRGRPPKKTGV 34
               +P++KRRGRPPKK+ V
Sbjct: 226 NEAAVPVVKRRGRPPKKSNV 245


>ref|XP_010926660.1| PREDICTED: HMG-Y-related protein A-like [Elaeis guineensis]
          Length = 290

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 47/138 (34%), Positives = 56/138 (40%), Gaps = 14/138 (10%)
 Frame = -1

Query: 393 KTPGLPQKATVLDAALSSEKKKRGRPPKAL-------------ADATQFAEKRRPGRPPK 253
           + PG P K   +    + EKKKRGRPPK+              A A     KR+PGRP K
Sbjct: 139 RKPGRPPKMAKVAPPPTGEKKKRGRPPKSAVPSVVPKRSKVVKAPAAAPDGKRKPGRPRK 198

Query: 252 AATPVVXXXXXXXXXXXXXXXXXXXXXKRGRPKKISQLPRDHGIAFQNNVAAGI-AIVMP 76
             T V                       RGRPKK +  P           AAG     +P
Sbjct: 199 NTTVVAAVPNVNAAPSGETQKRG-----RGRPKKAAAPPLPKPAKKSQEKAAGADEAAVP 253

Query: 75  IIKRRGRPPKKTGVPTKV 22
           ++KRRGRPPKK  V   V
Sbjct: 254 VVKRRGRPPKKVNVAAVV 271


>ref|XP_010911308.1| PREDICTED: LOW QUALITY PROTEIN: histone H1E, partial [Elaeis
           guineensis]
          Length = 179

 Score = 59.3 bits (142), Expect = 4e-08
 Identities = 48/138 (34%), Positives = 57/138 (41%), Gaps = 14/138 (10%)
 Frame = -1

Query: 393 KTPGLPQKATVLDAALSSEKKKRGRPPKAL-------------ADATQFAEKRRPGRPPK 253
           + PG P K   + A  + EKKKRGRPPK+              A A     KR+PGRP K
Sbjct: 29  RKPGRPPKKAKV-APPTGEKKKRGRPPKSAVPSVVPKRSKVVKAPAAAPDGKRKPGRPRK 87

Query: 252 AATPVVXXXXXXXXXXXXXXXXXXXXXKRGRPKKISQLPRDHGIAFQNNVAAGI-AIVMP 76
             T V                       RGRPKK +  P           AAG     +P
Sbjct: 88  NTTVVAAVPNVNAAPSGETQKRG-----RGRPKKAAAPPLPKPAKKSQEKAAGADEAAVP 142

Query: 75  IIKRRGRPPKKTGVPTKV 22
           ++KRRGRPPKK  V   V
Sbjct: 143 VVKRRGRPPKKVNVAAVV 160


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