BLASTX nr result
ID: Cheilocostus21_contig00008473
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00008473
(522 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009391644.1| PREDICTED: mediator of RNA polymerase II tra... 120 6e-29
ref|XP_009391643.1| PREDICTED: mediator of RNA polymerase II tra... 120 8e-29
ref|XP_008797329.1| PREDICTED: mediator of RNA polymerase II tra... 105 2e-23
ref|XP_010921311.1| PREDICTED: mediator of RNA polymerase II tra... 103 7e-23
ref|XP_010921303.1| PREDICTED: mediator of RNA polymerase II tra... 103 8e-23
ref|XP_020695062.1| mediator of RNA polymerase II transcription ... 99 4e-21
ref|XP_002455407.1| mediator of RNA polymerase II transcription ... 96 4e-20
gb|ONK79326.1| uncharacterized protein A4U43_C01F5230 [Asparagus... 95 4e-20
ref|XP_021669461.1| mediator of RNA polymerase II transcription ... 94 5e-20
ref|XP_020086667.1| mediator of RNA polymerase II transcription ... 94 6e-20
ref|XP_020253112.1| LOW QUALITY PROTEIN: mediator of RNA polymer... 95 9e-20
gb|ONM39117.1| Mediator of RNA polymerase II transcription subun... 93 2e-19
ref|XP_020086661.1| mediator of RNA polymerase II transcription ... 94 2e-19
ref|XP_021688339.1| mediator of RNA polymerase II transcription ... 94 2e-19
gb|PKA66960.1| Mediator of RNA polymerase II transcription subun... 94 3e-19
gb|OAY76204.1| Mediator of RNA polymerase II transcription subun... 94 3e-19
gb|ACF80958.1| unknown [Zea mays] 93 3e-19
ref|XP_020405072.1| uncharacterized protein LOC100193632 isoform... 93 4e-19
gb|ONM39116.1| Mediator of RNA polymerase II transcription subun... 93 4e-19
gb|ONM39115.1| Mediator of RNA polymerase II transcription subun... 93 5e-19
>ref|XP_009391644.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 429
Score = 120 bits (300), Expect = 6e-29
Identities = 58/80 (72%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDST-P 344
SLSLLL WICS+QTLFSK CSKC +LLVMDKSLALLLPPVHR+Y ET+ S+T+ST P
Sbjct: 349 SLSLLLRWICSHQTLFSKTCSKCDRLLVMDKSLALLLPPVHRAYQETTTTVSSQTESTPP 408
Query: 343 FKASHPDYFSAYHFGCSSID 284
KA+HPD+ SAYH GCS+ D
Sbjct: 409 TKAAHPDHISAYHIGCSADD 428
>ref|XP_009391643.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 449
Score = 120 bits (300), Expect = 8e-29
Identities = 58/80 (72%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDST-P 344
SLSLLL WICS+QTLFSK CSKC +LLVMDKSLALLLPPVHR+Y ET+ S+T+ST P
Sbjct: 369 SLSLLLRWICSHQTLFSKTCSKCDRLLVMDKSLALLLPPVHRAYQETTTTVSSQTESTPP 428
Query: 343 FKASHPDYFSAYHFGCSSID 284
KA+HPD+ SAYH GCS+ D
Sbjct: 429 TKAAHPDHISAYHIGCSADD 448
>ref|XP_008797329.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Phoenix dactylifera]
ref|XP_008797330.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Phoenix dactylifera]
Length = 425
Score = 105 bits (262), Expect = 2e-23
Identities = 52/77 (67%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTP- 344
SLSLLL WI SYQTLF+K CSKCG LL+MDKSLALLLPPVHR Y +T NF+++ STP
Sbjct: 346 SLSLLLRWIYSYQTLFTKVCSKCGHLLLMDKSLALLLPPVHRPYRQTCTTNFNQSHSTPS 405
Query: 343 FKASHPDYFSAYHFGCS 293
K + D SAYH GCS
Sbjct: 406 AKVQNVDLNSAYHIGCS 422
>ref|XP_010921311.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X2 [Elaeis guineensis]
Length = 405
Score = 103 bits (257), Expect = 7e-23
Identities = 51/77 (66%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTP- 344
SLSLLLHWI SYQTLF+K CSKCG LL+MDKSLALLLPPV R Y +T NF+++ TP
Sbjct: 326 SLSLLLHWIYSYQTLFTKVCSKCGHLLMMDKSLALLLPPVRRPYRQTCTTNFNQSQLTPS 385
Query: 343 FKASHPDYFSAYHFGCS 293
K + D SAYH GCS
Sbjct: 386 AKVQNVDLNSAYHIGCS 402
>ref|XP_010921303.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
ref|XP_010921305.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
ref|XP_010921306.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
ref|XP_010921307.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
ref|XP_010921308.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
ref|XP_010921309.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
ref|XP_010921310.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
ref|XP_019706431.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
Length = 425
Score = 103 bits (257), Expect = 8e-23
Identities = 51/77 (66%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTP- 344
SLSLLLHWI SYQTLF+K CSKCG LL+MDKSLALLLPPV R Y +T NF+++ TP
Sbjct: 346 SLSLLLHWIYSYQTLFTKVCSKCGHLLMMDKSLALLLPPVRRPYRQTCTTNFNQSQLTPS 405
Query: 343 FKASHPDYFSAYHFGCS 293
K + D SAYH GCS
Sbjct: 406 AKVQNVDLNSAYHIGCS 422
>ref|XP_020695062.1| mediator of RNA polymerase II transcription subunit 27 [Dendrobium
catenatum]
ref|XP_020695063.1| mediator of RNA polymerase II transcription subunit 27 [Dendrobium
catenatum]
ref|XP_020695064.1| mediator of RNA polymerase II transcription subunit 27 [Dendrobium
catenatum]
Length = 428
Score = 99.0 bits (245), Expect = 4e-21
Identities = 48/80 (60%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTPF 341
SLSL+L WICSYQTLF+K CSKC +LL+MD+SLAL+LPPVHR+Y TSA N T
Sbjct: 348 SLSLILRWICSYQTLFTKVCSKCERLLMMDESLALILPPVHRAYQNTSASNSHPNQLTAS 407
Query: 340 KASH-PDYFSAYHFGCSSID 284
H D+ AYH GCS+ D
Sbjct: 408 DRGHGSDFIFAYHIGCSNND 427
>ref|XP_002455407.1| mediator of RNA polymerase II transcription subunit 27 [Sorghum
bicolor]
gb|EES00527.1| hypothetical protein SORBI_3003G121300 [Sorghum bicolor]
Length = 418
Score = 96.3 bits (238), Expect = 4e-20
Identities = 48/79 (60%), Positives = 55/79 (69%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTPF 341
+LSLLL WI SYQTLF+K CSKCG+LL+MDKSLALLLPPVHR Y +TS++
Sbjct: 352 ALSLLLRWIASYQTLFTKVCSKCGRLLMMDKSLALLLPPVHRPYHQTSSIG--------- 402
Query: 340 KASHPDYFSAYHFGCSSID 284
PD AYH GCSS D
Sbjct: 403 ----PDLQEAYHIGCSSYD 417
>gb|ONK79326.1| uncharacterized protein A4U43_C01F5230 [Asparagus officinalis]
Length = 335
Score = 95.1 bits (235), Expect = 4e-20
Identities = 48/77 (62%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTD-STP 344
+LSLLLHW+CSYQTLFSKACSKC +LLVMDKS ALLLPPV R Y +TS + S+
Sbjct: 193 ALSLLLHWVCSYQTLFSKACSKCKRLLVMDKSSALLLPPVQRPYQQTSVTKLNPNQLSSS 252
Query: 343 FKASHPDYFSAYHFGCS 293
K D AYH GCS
Sbjct: 253 AKDLSQDQTLAYHIGCS 269
>ref|XP_021669461.1| mediator of RNA polymerase II transcription subunit 27-like,
partial [Hevea brasiliensis]
Length = 263
Score = 93.6 bits (231), Expect = 5e-20
Identities = 48/80 (60%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTPF 341
+L LLHWICSYQTLF+K CSKCG+LL MD+ +LLLPPVHR Y SA+ S STP
Sbjct: 186 ALYFLLHWICSYQTLFTKVCSKCGRLLAMDRESSLLLPPVHRPYRHFSALKVS---STPA 242
Query: 340 KASHPDYF-SAYHFGCSSID 284
+S D F AYH GC S D
Sbjct: 243 TSSTKDQFPGAYHIGCFSED 262
>ref|XP_020086667.1| mediator of RNA polymerase II transcription subunit 27-like isoform
X2 [Ananas comosus]
Length = 288
Score = 94.0 bits (232), Expect = 6e-20
Identities = 48/77 (62%), Positives = 53/77 (68%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTPF 341
SL LLL WICSYQTLF+K CSKCG+LL+MDK+LALLLPPVHR Y TS+V
Sbjct: 219 SLPLLLCWICSYQTLFAKVCSKCGRLLMMDKTLALLLPPVHRPYFLTSSV---------- 268
Query: 340 KASHPDYFSAYHFGCSS 290
K D AYH GCSS
Sbjct: 269 KGQSSDLTKAYHIGCSS 285
>ref|XP_020253112.1| LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription
subunit 27-like [Asparagus officinalis]
Length = 409
Score = 95.1 bits (235), Expect = 9e-20
Identities = 48/77 (62%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTD-STP 344
+LSLLLHW+CSYQTLFSKACSKC +LLVMDKS ALLLPPV R Y +TS + S+
Sbjct: 328 ALSLLLHWVCSYQTLFSKACSKCKRLLVMDKSSALLLPPVQRPYQQTSVTKLNPNQLSSS 387
Query: 343 FKASHPDYFSAYHFGCS 293
K D AYH GCS
Sbjct: 388 AKDLSQDQTLAYHIGCS 404
>gb|ONM39117.1| Mediator of RNA polymerase II transcription subunit 27 [Zea mays]
Length = 313
Score = 93.2 bits (230), Expect = 2e-19
Identities = 47/79 (59%), Positives = 53/79 (67%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTPF 341
+L LLL WI SYQTLF+K CSKCG+LL+MDKSLALLLPPVHR Y +TS +
Sbjct: 247 ALPLLLRWIASYQTLFTKVCSKCGRLLMMDKSLALLLPPVHRPYHQTSNIG--------- 297
Query: 340 KASHPDYFSAYHFGCSSID 284
PD AYH GCSS D
Sbjct: 298 ----PDLQEAYHIGCSSYD 312
>ref|XP_020086661.1| mediator of RNA polymerase II transcription subunit 27-like isoform
X1 [Ananas comosus]
ref|XP_020086662.1| mediator of RNA polymerase II transcription subunit 27-like isoform
X1 [Ananas comosus]
ref|XP_020086663.1| mediator of RNA polymerase II transcription subunit 27-like isoform
X1 [Ananas comosus]
ref|XP_020086664.1| mediator of RNA polymerase II transcription subunit 27-like isoform
X1 [Ananas comosus]
ref|XP_020086665.1| mediator of RNA polymerase II transcription subunit 27-like isoform
X1 [Ananas comosus]
Length = 371
Score = 94.0 bits (232), Expect = 2e-19
Identities = 48/77 (62%), Positives = 53/77 (68%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTPF 341
SL LLL WICSYQTLF+K CSKCG+LL+MDK+LALLLPPVHR Y TS+V
Sbjct: 302 SLPLLLCWICSYQTLFAKVCSKCGRLLMMDKTLALLLPPVHRPYFLTSSV---------- 351
Query: 340 KASHPDYFSAYHFGCSS 290
K D AYH GCSS
Sbjct: 352 KGQSSDLTKAYHIGCSS 368
>ref|XP_021688339.1| mediator of RNA polymerase II transcription subunit 27-like [Hevea
brasiliensis]
Length = 421
Score = 94.0 bits (232), Expect = 2e-19
Identities = 48/80 (60%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTPF 341
+L LLHWICSYQTLF+K CSKCG+LL MD+ +LLLPPVHR Y SA+ S STP
Sbjct: 344 ALHFLLHWICSYQTLFTKVCSKCGRLLAMDRESSLLLPPVHRPYRHFSALKVS---STPA 400
Query: 340 KASHPDYF-SAYHFGCSSID 284
+S D F AYH GC S D
Sbjct: 401 TSSTKDQFPGAYHIGCFSED 420
>gb|PKA66960.1| Mediator of RNA polymerase II transcription subunit 27 [Apostasia
shenzhenica]
Length = 426
Score = 94.0 bits (232), Expect = 3e-19
Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTD-STP 344
SLSLLL WICSY+TLF+ ACSKC +LL+MDKSLAL+LPPVHR+Y TSA S +
Sbjct: 346 SLSLLLRWICSYRTLFTDACSKCQRLLMMDKSLALVLPPVHRTYQITSATKTSPNQLPSS 405
Query: 343 FKASHPDYFSAYHFGCSSID 284
K+ D+ AYH GC++ D
Sbjct: 406 DKSQSCDFIFAYHIGCAADD 425
>gb|OAY76204.1| Mediator of RNA polymerase II transcription subunit 27 [Ananas
comosus]
Length = 441
Score = 94.0 bits (232), Expect = 3e-19
Identities = 48/77 (62%), Positives = 53/77 (68%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTPF 341
SL LLL WICSYQTLF+K CSKCG+LL+MDK+LALLLPPVHR Y TS+V
Sbjct: 372 SLPLLLCWICSYQTLFAKVCSKCGRLLMMDKTLALLLPPVHRPYFLTSSV---------- 421
Query: 340 KASHPDYFSAYHFGCSS 290
K D AYH GCSS
Sbjct: 422 KGQSSDLTKAYHIGCSS 438
>gb|ACF80958.1| unknown [Zea mays]
Length = 375
Score = 93.2 bits (230), Expect = 3e-19
Identities = 47/79 (59%), Positives = 53/79 (67%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTPF 341
+L LLL WI SYQTLF+K CSKCG+LL+MDKSLALLLPPVHR Y +TS +
Sbjct: 309 ALPLLLRWIASYQTLFTKVCSKCGRLLMMDKSLALLLPPVHRPYHQTSNIG--------- 359
Query: 340 KASHPDYFSAYHFGCSSID 284
PD AYH GCSS D
Sbjct: 360 ----PDLQEAYHIGCSSYD 374
>ref|XP_020405072.1| uncharacterized protein LOC100193632 isoform X1 [Zea mays]
Length = 402
Score = 93.2 bits (230), Expect = 4e-19
Identities = 47/79 (59%), Positives = 53/79 (67%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTPF 341
+L LLL WI SYQTLF+K CSKCG+LL+MDKSLALLLPPVHR Y +TS +
Sbjct: 336 ALPLLLRWIASYQTLFTKVCSKCGRLLMMDKSLALLLPPVHRPYHQTSNIG--------- 386
Query: 340 KASHPDYFSAYHFGCSSID 284
PD AYH GCSS D
Sbjct: 387 ----PDLQEAYHIGCSSYD 401
>gb|ONM39116.1| Mediator of RNA polymerase II transcription subunit 27 [Zea mays]
Length = 408
Score = 93.2 bits (230), Expect = 4e-19
Identities = 47/79 (59%), Positives = 53/79 (67%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTPF 341
+L LLL WI SYQTLF+K CSKCG+LL+MDKSLALLLPPVHR Y +TS +
Sbjct: 342 ALPLLLRWIASYQTLFTKVCSKCGRLLMMDKSLALLLPPVHRPYHQTSNIG--------- 392
Query: 340 KASHPDYFSAYHFGCSSID 284
PD AYH GCSS D
Sbjct: 393 ----PDLQEAYHIGCSSYD 407
>gb|ONM39115.1| Mediator of RNA polymerase II transcription subunit 27 [Zea mays]
Length = 420
Score = 93.2 bits (230), Expect = 5e-19
Identities = 47/79 (59%), Positives = 53/79 (67%)
Frame = -3
Query: 520 SLSLLLHWICSYQTLFSKACSKCGQLLVMDKSLALLLPPVHRSYMETSAVNFSRTDSTPF 341
+L LLL WI SYQTLF+K CSKCG+LL+MDKSLALLLPPVHR Y +TS +
Sbjct: 354 ALPLLLRWIASYQTLFTKVCSKCGRLLMMDKSLALLLPPVHRPYHQTSNIG--------- 404
Query: 340 KASHPDYFSAYHFGCSSID 284
PD AYH GCSS D
Sbjct: 405 ----PDLQEAYHIGCSSYD 419