BLASTX nr result

ID: Cheilocostus21_contig00008371 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00008371
         (586 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009392484.1| PREDICTED: protein transport protein Sec24-l...    57   7e-06

>ref|XP_009392484.1| PREDICTED: protein transport protein Sec24-like At4g32640 [Musa
           acuminata subsp. malaccensis]
          Length = 1084

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 44/119 (36%), Positives = 46/119 (38%), Gaps = 5/119 (4%)
 Frame = -1

Query: 370 TANPNVAGAAQTAQIGHPSGPSNAP-----PPFXXXXXXXXXXXXXXXXXXXXXXXXXPQ 206
           +AN NVAGA Q  QIG P   S AP     P                           PQ
Sbjct: 22  SANANVAGAPQINQIGRPLPSSTAPSAPLPPSPFSAPLPASSRPGPPQYASRPPAAAFPQ 81

Query: 205 GLIASNGPSVSGFTVPRNPPPPSAQQTPLVDXXXXXXXXXXXXXXXXXPGVRPFPGSFP 29
           GL+ASNGP   G   PR PPP  AQ TP V                    VRPFPGS P
Sbjct: 82  GLVASNGPQ--GLVAPRIPPPSHAQHTPPVGAPASIRAPSPSAAPSQAQVVRPFPGSPP 138


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