BLASTX nr result

ID: Cheilocostus21_contig00008328 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00008328
         (625 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009421472.1| PREDICTED: nephrocystin-3 [Musa acuminata su...    96   3e-19

>ref|XP_009421472.1| PREDICTED: nephrocystin-3 [Musa acuminata subsp. malaccensis]
          Length = 620

 Score = 95.5 bits (236), Expect = 3e-19
 Identities = 57/102 (55%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
 Frame = -2

Query: 294 MPGLVAPPEAPLLRVDVPDDGAAQIRRPSIDQDLQRETRMXXXXXXXXXXXXXXXXXXXX 115
           MPGLVAPPEAP LRVDVPDDGA+QIRR + D D  RE R+                    
Sbjct: 1   MPGLVAPPEAPPLRVDVPDDGASQIRRTADDPDPPREPRVASPGPKKTPSPTPGSSRVRS 60

Query: 114 XXXXXXXAGKRRVSLERPGSAAGAA----KDLPAAMDETALD 1
                  AGKRR+SLERPGSAA AA    +DLPA MDETALD
Sbjct: 61  AERGSSSAGKRRLSLERPGSAASAAGSALRDLPAVMDETALD 102


Top