BLASTX nr result
ID: Cheilocostus21_contig00008255
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00008255
(2952 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAW30012.1| polyprotein, partial [Citrus yellow mosaic virus] 221 8e-61
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1] 231 1e-58
gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus] 231 2e-58
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration... 229 5e-58
gb|AHG32726.1| ORF3, partial [Dioscorea rotundata] 219 2e-57
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor... 228 2e-57
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962... 228 2e-57
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 227 3e-57
ref|NP_569153.1| unknown [Citrus yellow mosaic virus] >gi|164169... 227 3e-57
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 226 5e-57
gb|ANK58548.1| polyprotein [Fig badnavirus 1] 226 6e-57
gb|ANK58539.1| polyprotein [Fig badnavirus 1] 226 6e-57
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] 226 9e-57
gb|AER00538.1| ORF III [Citrus yellow mosaic virus] 226 9e-57
emb|CAA64703.1| polyprotein, partial [Dioscorea bacilliform virus] 209 2e-56
gb|ACH86211.1| unknown [Citrus yellow mosaic virus] 224 2e-56
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 224 2e-56
gb|PKU61844.1| RNA-directed DNA polymerase [Dendrobium catenatum] 214 3e-56
gb|ANK58542.1| polyprotein [Fig badnavirus 1] 224 3e-56
gb|ANK58536.1| polyprotein [Fig badnavirus 1] 224 3e-56
>gb|AAW30012.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 357
Score = 221 bits (564), Expect = 8e-61
Identities = 107/169 (63%), Positives = 135/169 (79%), Gaps = 11/169 (6%)
Frame = +2
Query: 2477 RKMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIED 2656
++MV YSTE P F +K L+ EL++QG+IGE P+ +W+KN+V C LDIKN D++IED
Sbjct: 132 QEMVAYSTERPFVHFQQKFAGLIQELKAQGYIGEEPMKYWAKNKVVCHLDIKNSDMVIED 191
Query: 2657 KPLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKER 2836
+PLKH+TPQ +ESF +H++ALL++G IRPS+SRHRTTAI+V SGT+IDP TG+E KGKER
Sbjct: 192 RPLKHVTPQMEESFRKHVEALLKIGAIRPSKSRHRTTAIMVSSGTSIDPITGKEVKGKER 251
Query: 2837 LVFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
+VFNYKRLND T+KDQYSLPG I+SKFDLKSGFHQVAM
Sbjct: 252 MVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAM 300
Score = 67.8 bits (164), Expect = 4e-08
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH 2166
D T+KDQYSLPGI TILQ++ S I+SKFDLKSGFHQVAMH
Sbjct: 261 DLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMH 301
Score = 66.6 bits (161), Expect = 1e-07
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = -3
Query: 2383 YPLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIET 2255
+ +++G+ IQ+ILGCNFIRSM GGVR+EGN VTFYK IT I T
Sbjct: 63 FEMQIGDGIQLILGCNFIRSMYGGVRLEGNTVTFYKQITSINT 105
>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
Length = 1846
Score = 231 bits (590), Expect = 1e-58
Identities = 119/208 (57%), Positives = 151/208 (72%), Gaps = 18/208 (8%)
Frame = +2
Query: 2381 INSFIET*FRNLTF-----STDVKRFLRRD--QSYVFWCRKMVCYSTEVPNKDFLRKINS 2539
I + T ++NLT ST++ R L+ D ++ ++ V + + FL++ +
Sbjct: 1171 IEGNVVTFYKNLTVINTSQSTEIARMLQEDVDDEELWQIQEAVYINIGKSRESFLKRFEA 1230
Query: 2540 LLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIEDKPLKHLTPQNKESFTRHIKAL 2719
L+++L+ G+IGENPL HW KN+V C+LDIKNPD IIEDKPLKHLTP KESF RH +AL
Sbjct: 1231 LINQLKEAGYIGENPLQHWEKNRVVCQLDIKNPDFIIEDKPLKHLTPSMKESFRRHTEAL 1290
Query: 2720 LELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKERLVFNYKRLNDNTHKDQYSLPG 2899
L+LGVIRPS+SRHRTTA+IV SGT +DP TG+ET+GKER+VFNYKRLND T+KDQYSLPG
Sbjct: 1291 LKLGVIRPSKSRHRTTAMIVQSGTAVDPVTGKETRGKERMVFNYKRLNDLTNKDQYSLPG 1350
Query: 2900 -----------KIYSKFDLKSGFHQVAM 2950
+IYSKFDLKSGFHQVAM
Sbjct: 1351 ISTIMKKVGNSRIYSKFDLKSGFHQVAM 1378
Score = 74.7 bits (182), Expect = 1e-09
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH 2166
D T+KDQYSLPGI+TI++KVG S+IYSKFDLKSGFHQVAMH
Sbjct: 1339 DLTNKDQYSLPGISTIMKKVGNSRIYSKFDLKSGFHQVAMH 1379
Score = 67.4 bits (163), Expect = 2e-07
Identities = 28/43 (65%), Positives = 38/43 (88%)
Frame = -3
Query: 2383 YPLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIET 2255
+P+++ + +QMI+GCNFIR+M GGVRIEGN+VTFYKN+T I T
Sbjct: 1145 FPIKMEDGVQMIVGCNFIRAMYGGVRIEGNVVTFYKNLTVINT 1187
>gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]
Length = 1946
Score = 231 bits (588), Expect = 2e-58
Identities = 112/162 (69%), Positives = 132/162 (81%), Gaps = 11/162 (6%)
Frame = +2
Query: 2498 TEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIEDKPLKHLT 2677
T NK+F ++I + L+ QGFIGE P+ HW KN+VTCKLDI NPDL IED+PLKH+T
Sbjct: 1417 TVTNNKEFCQRIEPTIKALKEQGFIGEEPMKHWVKNKVTCKLDIINPDLTIEDRPLKHVT 1476
Query: 2678 PQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKERLVFNYKR 2857
PQ +E+F +H++ALL+L VIRPSQSRHRTTAIIV+SGTT+DPKTG+E KGKER+VFNYKR
Sbjct: 1477 PQMQEAFKKHVQALLKLKVIRPSQSRHRTTAIIVYSGTTVDPKTGKEVKGKERMVFNYKR 1536
Query: 2858 LNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
LNDNT+KDQYSLPG KIYSKFDLKSGFHQVAM
Sbjct: 1537 LNDNTNKDQYSLPGINTIIQRVGQSKIYSKFDLKSGFHQVAM 1578
Score = 78.2 bits (191), Expect = 1e-10
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAM 2163
DNT+KDQYSLPGINTI+Q+VG SKIYSKFDLKSGFHQVAM
Sbjct: 1539 DNTNKDQYSLPGINTIIQRVGQSKIYSKFDLKSGFHQVAM 1578
Score = 72.4 bits (176), Expect = 6e-09
Identities = 33/47 (70%), Positives = 42/47 (89%)
Frame = -3
Query: 2386 IYPLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIETLPF 2246
I+PL+L + IQMI+GCNFIR+M GG+RIEGN VTFYKN+T I+TLP+
Sbjct: 1345 IFPLKL-DDIQMIIGCNFIRAMAGGIRIEGNEVTFYKNVTTIKTLPY 1390
>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1789
Score = 229 bits (585), Expect = 5e-58
Identities = 112/169 (66%), Positives = 135/169 (79%), Gaps = 11/169 (6%)
Frame = +2
Query: 2477 RKMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIED 2656
++MV + + FL++ L+ EL+ G+IGENPL HWSKN V C+LDIKNPD IIED
Sbjct: 1230 QEMVICNIGESRESFLKRFKPLIEELKEAGYIGENPLQHWSKNGVLCQLDIKNPDFIIED 1289
Query: 2657 KPLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKER 2836
+PLK +TPQ KESF +H+KALL+L VIRPS+SRHRTTA++V+SGTT+DPKTG+ETKGKER
Sbjct: 1290 RPLKSVTPQMKESFKKHVKALLDLRVIRPSKSRHRTTAMLVNSGTTVDPKTGKETKGKER 1349
Query: 2837 LVFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
+VFNYKRLND THKDQYSLPG KI+SKFDLKSGFHQVAM
Sbjct: 1350 MVFNYKRLNDITHKDQYSLPGINTILKRIGNSKIFSKFDLKSGFHQVAM 1398
Score = 78.2 bits (191), Expect = 9e-11
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH 2166
D THKDQYSLPGINTIL+++G SKI+SKFDLKSGFHQVAMH
Sbjct: 1359 DITHKDQYSLPGINTILKRIGNSKIFSKFDLKSGFHQVAMH 1399
Score = 70.1 bits (170), Expect = 3e-08
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = -3
Query: 2380 PLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIETLP 2249
PL +G++IQMI+GCNFIR+M GGVRIEGN VTFYKN+T I T P
Sbjct: 1166 PLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNLTRISTSP 1209
>gb|AHG32726.1| ORF3, partial [Dioscorea rotundata]
Length = 579
Score = 219 bits (557), Expect = 2e-57
Identities = 107/160 (66%), Positives = 127/160 (79%), Gaps = 11/160 (6%)
Frame = +2
Query: 2504 VPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIEDKPLKHLTPQ 2683
V N +F +K L+ EL++ G+IGE P+ W++N+VTCKLDI NPDL I+DKPLKH+TP
Sbjct: 172 VVNINFTQKFGDLIQELKNAGYIGEEPMKFWAQNKVTCKLDIINPDLTIQDKPLKHVTPS 231
Query: 2684 NKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKERLVFNYKRLN 2863
+E+F +HI+ALL+L VIRPS S+HRTTA IVHSGTT+DPKTG ETKGKER+VFNYKRLN
Sbjct: 232 MEEAFRKHIQALLKLKVIRPSTSKHRTTAFIVHSGTTVDPKTGVETKGKERMVFNYKRLN 291
Query: 2864 DNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
DNT KDQYSLPG IYSKFDLKSGFHQVAM
Sbjct: 292 DNTEKDQYSLPGINTILKRIGQSVIYSKFDLKSGFHQVAM 331
Score = 73.9 bits (180), Expect = 1e-09
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAM 2163
DNT KDQYSLPGINTIL+++G S IYSKFDLKSGFHQVAM
Sbjct: 292 DNTEKDQYSLPGINTILKRIGQSVIYSKFDLKSGFHQVAM 331
Score = 67.8 bits (164), Expect = 9e-08
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -3
Query: 2383 YPLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIET 2255
+PL+LG Q+ILGCNFIRSM GGVRIEG+ VTFYKN+T I+T
Sbjct: 97 FPLKLGGGEQLILGCNFIRSMNGGVRIEGDEVTFYKNVTTIKT 139
>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1830
Score = 228 bits (580), Expect = 2e-57
Identities = 112/167 (67%), Positives = 131/167 (78%), Gaps = 11/167 (6%)
Frame = +2
Query: 2483 MVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIEDKP 2662
MV + + FL+K L+ E + G+IGENPL HW KN V C+LDIKNPD IIED+P
Sbjct: 1195 MVVCNIGESRESFLKKFKPLIEEFQEAGYIGENPLQHWEKNGVLCQLDIKNPDFIIEDRP 1254
Query: 2663 LKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKERLV 2842
LK +TPQ KESF RH+KALL+L VIRPS+SRHRTTA++V+SGTT+DPKTG+ETKGKER+V
Sbjct: 1255 LKSVTPQMKESFKRHVKALLDLKVIRPSKSRHRTTAMLVNSGTTVDPKTGKETKGKERMV 1314
Query: 2843 FNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
FNYKRLND THKDQYSLPG KI+SKFDLKSGFHQVAM
Sbjct: 1315 FNYKRLNDITHKDQYSLPGINTILKRIGNSKIFSKFDLKSGFHQVAM 1361
Score = 78.2 bits (191), Expect = 9e-11
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH 2166
D THKDQYSLPGINTIL+++G SKI+SKFDLKSGFHQVAMH
Sbjct: 1322 DITHKDQYSLPGINTILKRIGNSKIFSKFDLKSGFHQVAMH 1362
Score = 70.5 bits (171), Expect = 2e-08
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = -3
Query: 2380 PLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIETLP 2249
PL +G++IQMI+GCNFIR+M GGVRIEGN VTFYKN+T I T P
Sbjct: 1130 PLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNLTKISTSP 1173
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
gb|AEF56561.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 228 bits (580), Expect = 2e-57
Identities = 113/169 (66%), Positives = 132/169 (78%), Gaps = 11/169 (6%)
Frame = +2
Query: 2477 RKMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIED 2656
++MV + K FL+K LL EL+ GFIGENPL HW KN + C+LDIKNPD IIED
Sbjct: 1214 QEMVICNIGESRKSFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIED 1273
Query: 2657 KPLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKER 2836
+PLK+LTPQ KESF +HIK LL+LGVIR S+SRHRTTA++V+SGTT+DPKTG+E K KER
Sbjct: 1274 RPLKNLTPQMKESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKRKER 1333
Query: 2837 LVFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
+VFNYKRLND THKDQYSLPG KI+SKFDLKSGFHQVAM
Sbjct: 1334 MVFNYKRLNDITHKDQYSLPGINTILKKVGNSKIFSKFDLKSGFHQVAM 1382
Score = 79.7 bits (195), Expect = 3e-11
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH 2166
D THKDQYSLPGINTIL+KVG SKI+SKFDLKSGFHQVAMH
Sbjct: 1343 DITHKDQYSLPGINTILKKVGNSKIFSKFDLKSGFHQVAMH 1383
Score = 70.1 bits (170), Expect = 3e-08
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = -3
Query: 2380 PLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIETLP 2249
PL +G++IQMI+GCNFIR+M GGVRIEGN VTFYKN+T I T P
Sbjct: 1151 PLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNLTRISTSP 1194
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 227 bits (579), Expect = 3e-57
Identities = 109/169 (64%), Positives = 137/169 (81%), Gaps = 11/169 (6%)
Frame = +2
Query: 2477 RKMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIED 2656
++MV YSTE P F +K L+ +L++QG+IGE P+ +W+KNQV C LDIKNPD++IED
Sbjct: 1324 QEMVAYSTERPFVQFQQKFAGLIQDLKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIED 1383
Query: 2657 KPLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKER 2836
+PLKH+TPQ +ESF +H++ALL++G IRPS+SRHRTTAIIV+SGT+IDP TG+E KGKER
Sbjct: 1384 RPLKHVTPQMEESFRKHVEALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKER 1443
Query: 2837 LVFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
+VFNYKRLND T+KDQYSLPG I+SKFDLKSGFHQVAM
Sbjct: 1444 MVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAM 1492
Score = 68.2 bits (165), Expect = 1e-07
Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH-DSKPFPVF 2190
D T+KDQYSLPGI TILQ++ S I+SKFDLKSGFHQVAMH DS + F
Sbjct: 1453 DLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSVEWTAF 1502
Score = 66.2 bits (160), Expect = 4e-07
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = -3
Query: 2383 YPLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIET 2255
+ +++G+ IQ+ILGCNFIRSM GGVR+EGN +TFYK IT I T
Sbjct: 1255 FEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQITSINT 1297
>ref|NP_569153.1| unknown [Citrus yellow mosaic virus]
gb|AAL18495.1|AF347695_3 unknown [Citrus yellow mosaic virus]
Length = 1983
Score = 227 bits (579), Expect = 3e-57
Identities = 109/169 (64%), Positives = 137/169 (81%), Gaps = 11/169 (6%)
Frame = +2
Query: 2477 RKMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIED 2656
++MV YSTE P F +K L+ +L++QG+IGE P+ +W+KNQV C LDIKNPD++IED
Sbjct: 1339 QEMVAYSTERPFVQFQQKFAGLIQDLKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIED 1398
Query: 2657 KPLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKER 2836
+PLKH+TPQ +ESF +H++ALL++G IRPS+SRHRTTAIIV+SGT+IDP TG+E KGKER
Sbjct: 1399 RPLKHVTPQMEESFRKHVEALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKER 1458
Query: 2837 LVFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
+VFNYKRLND T+KDQYSLPG I+SKFDLKSGFHQVAM
Sbjct: 1459 MVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAM 1507
Score = 67.8 bits (164), Expect = 1e-07
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH 2166
D T+KDQYSLPGI TILQ++ S I+SKFDLKSGFHQVAMH
Sbjct: 1468 DLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMH 1508
Score = 66.2 bits (160), Expect = 4e-07
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = -3
Query: 2383 YPLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIET 2255
+ +++G+ IQ+ILGCNFIRSM GGVR+EGN +TFYK IT I T
Sbjct: 1270 FEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQITSINT 1312
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 226 bits (577), Expect = 5e-57
Identities = 109/169 (64%), Positives = 137/169 (81%), Gaps = 11/169 (6%)
Frame = +2
Query: 2477 RKMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIED 2656
++MV YSTE P F +K L+ EL++QG+IGE P+ +W+KN+V C LDIKNPD++IED
Sbjct: 1323 QEMVAYSTERPFVHFQQKFAGLIQELKAQGYIGEEPMKYWAKNKVVCHLDIKNPDMVIED 1382
Query: 2657 KPLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKER 2836
+PLKH+TPQ +ESF +H++ALL++G IRPS+SRHRTTAIIV+SGT+IDP TG+E KGKER
Sbjct: 1383 RPLKHVTPQMEESFRKHVEALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKER 1442
Query: 2837 LVFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
+VFNYKRLND T+KDQYSLPG I+SKFDLKSGFHQVAM
Sbjct: 1443 MVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAM 1491
Score = 67.8 bits (164), Expect = 1e-07
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH 2166
D T+KDQYSLPGI TILQ++ S I+SKFDLKSGFHQVAMH
Sbjct: 1452 DLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMH 1492
Score = 66.6 bits (161), Expect = 3e-07
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = -3
Query: 2383 YPLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIET 2255
+ +++G+ IQ+ILGCNFIRSM GGVR+EGN VTFYK IT I T
Sbjct: 1254 FEMQIGDGIQLILGCNFIRSMYGGVRLEGNTVTFYKQITSINT 1296
>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 226 bits (576), Expect = 6e-57
Identities = 112/169 (66%), Positives = 132/169 (78%), Gaps = 11/169 (6%)
Frame = +2
Query: 2477 RKMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIED 2656
++MV + + FL+K LL EL+ GFIGENPL HW KN + C+LDIKNPD IIED
Sbjct: 1214 QEMVICNIGESRESFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIED 1273
Query: 2657 KPLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKER 2836
+PLK+LTPQ KESF +HIK LL+LGVIR S+SRHRTTA++V+SGTT+DPKTG+E K KER
Sbjct: 1274 RPLKNLTPQMKESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKRKER 1333
Query: 2837 LVFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
+VFNYKRLND THKDQYSLPG KI+SKFDLKSGFHQVAM
Sbjct: 1334 MVFNYKRLNDITHKDQYSLPGINTILKKVGNSKIFSKFDLKSGFHQVAM 1382
Score = 79.7 bits (195), Expect = 3e-11
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH 2166
D THKDQYSLPGINTIL+KVG SKI+SKFDLKSGFHQVAMH
Sbjct: 1343 DITHKDQYSLPGINTILKKVGNSKIFSKFDLKSGFHQVAMH 1383
Score = 70.1 bits (170), Expect = 3e-08
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = -3
Query: 2380 PLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIETLP 2249
PL +G++IQMI+GCNFIR+M GGVRIEGN VTFYKN+T I T P
Sbjct: 1151 PLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNLTRISTSP 1194
>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 226 bits (576), Expect = 6e-57
Identities = 112/169 (66%), Positives = 132/169 (78%), Gaps = 11/169 (6%)
Frame = +2
Query: 2477 RKMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIED 2656
++MV + + FL+K LL EL+ GFIGENPL HW KN + C+LDIKNPD IIED
Sbjct: 1214 QEMVICNIGESRESFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIED 1273
Query: 2657 KPLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKER 2836
+PLK+LT Q KESF +HIK LL+LGVIR S+SRHRTTA++V+SGTT+DPKTG+E KGKER
Sbjct: 1274 RPLKNLTSQMKESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKGKER 1333
Query: 2837 LVFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
+VFNYKRLND THKDQYSLPG KI+SKFDLKSGFHQVAM
Sbjct: 1334 MVFNYKRLNDITHKDQYSLPGINTILKKVGNSKIFSKFDLKSGFHQVAM 1382
Score = 79.7 bits (195), Expect = 3e-11
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH 2166
D THKDQYSLPGINTIL+KVG SKI+SKFDLKSGFHQVAMH
Sbjct: 1343 DITHKDQYSLPGINTILKKVGNSKIFSKFDLKSGFHQVAMH 1383
Score = 70.1 bits (170), Expect = 3e-08
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = -3
Query: 2380 PLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIETLP 2249
PL +G++IQMI+GCNFIR+M GGVRIEGN VTFYKN+T I T P
Sbjct: 1151 PLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNLTRISTSP 1194
>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
Length = 1976
Score = 226 bits (575), Expect = 9e-57
Identities = 109/169 (64%), Positives = 136/169 (80%), Gaps = 11/169 (6%)
Frame = +2
Query: 2477 RKMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIED 2656
++MV YSTE P F +K L+ EL++QG+IGE P+ +W+KNQV C LDIKNPD++IED
Sbjct: 1331 QEMVAYSTERPFVHFQQKFAGLIQELKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIED 1390
Query: 2657 KPLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKER 2836
+PLKH+TPQ + SF +H++ALL++G IRPS+SRHRTTAIIV+SGT+IDP TG+E KGKER
Sbjct: 1391 RPLKHVTPQMEGSFRKHVEALLKIGAIRPSKSRHRTTAIIVNSGTSIDPLTGKEVKGKER 1450
Query: 2837 LVFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
+VFNYKRLND T+KDQYSLPG I+SKFDLKSGFHQVAM
Sbjct: 1451 MVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAM 1499
Score = 67.8 bits (164), Expect = 1e-07
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH 2166
D T+KDQYSLPGI TILQ++ S I+SKFDLKSGFHQVAMH
Sbjct: 1460 DLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMH 1500
Score = 66.2 bits (160), Expect = 4e-07
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = -3
Query: 2383 YPLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIET 2255
+ +++G+ IQ+ILGCNFIRSM GGVR+EGN +TFYK IT I T
Sbjct: 1262 FEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQITSINT 1304
>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
Length = 1982
Score = 226 bits (575), Expect = 9e-57
Identities = 108/169 (63%), Positives = 136/169 (80%), Gaps = 11/169 (6%)
Frame = +2
Query: 2477 RKMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIED 2656
++MV YSTE P F +K L+ +L++QG+IGE P+ +W+KNQV C LDIKNPD++IED
Sbjct: 1338 QEMVAYSTERPFVQFQQKFAGLIQDLKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIED 1397
Query: 2657 KPLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKER 2836
+PLKH+TPQ +ESF +H++ALL++G IRPS+SRHRTTAII +SGT+IDP TG+E KGKER
Sbjct: 1398 RPLKHVTPQMEESFRKHVEALLKIGAIRPSKSRHRTTAIIANSGTSIDPITGKEVKGKER 1457
Query: 2837 LVFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
+VFNYKRLND T+KDQYSLPG I+SKFDLKSGFHQVAM
Sbjct: 1458 MVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAM 1506
Score = 67.8 bits (164), Expect = 1e-07
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH 2166
D T+KDQYSLPGI TILQ++ S I+SKFDLKSGFHQVAMH
Sbjct: 1467 DLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMH 1507
Score = 65.9 bits (159), Expect = 6e-07
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = -3
Query: 2383 YPLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIET 2255
+ +++G+ IQ+ILGCNFIRSM GGVR+EGN +TFYK IT I T
Sbjct: 1269 FVMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQITSINT 1311
>emb|CAA64703.1| polyprotein, partial [Dioscorea bacilliform virus]
Length = 338
Score = 209 bits (531), Expect = 2e-56
Identities = 105/166 (63%), Positives = 127/166 (76%), Gaps = 13/166 (7%)
Frame = +2
Query: 2492 YSTEVP--NKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIEDKPL 2665
YST P ++F + L+ +L++ G+IGENP+ W+KN+V CKL+I NP+L I+DKPL
Sbjct: 76 YSTICPVVQENFKVRYEELIIQLKNAGYIGENPMKFWAKNKVQCKLEIINPNLTIQDKPL 135
Query: 2666 KHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKERLVF 2845
KH+TP + +F RH+ ALLEL VIRPS S+HRTTA IV+SGTT+DP TGQE KGKER+VF
Sbjct: 136 KHVTPAMEATFKRHVDALLELKVIRPSTSQHRTTAFIVYSGTTVDPATGQEKKGKERMVF 195
Query: 2846 NYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
NYKRLNDNT KDQYSLPG KIYSKFDLKSGFHQVAM
Sbjct: 196 NYKRLNDNTEKDQYSLPGINTILKKVGNSKIYSKFDLKSGFHQVAM 241
Score = 82.0 bits (201), Expect = 7e-13
Identities = 41/50 (82%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH-DSKPFPVF 2190
DNT KDQYSLPGINTIL+KVG SKIYSKFDLKSGFHQVAMH DS + F
Sbjct: 202 DNTEKDQYSLPGINTILKKVGNSKIYSKFDLKSGFHQVAMHPDSVQWTAF 251
Score = 67.8 bits (164), Expect = 4e-08
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = -3
Query: 2383 YPLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIET 2255
+PL LG Q+++GCNFIRSM GGVRIEGN VTFYKNIT ++T
Sbjct: 7 FPLRLGGGEQLVIGCNFIRSMNGGVRIEGNDVTFYKNITTVKT 49
>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
Length = 1490
Score = 224 bits (572), Expect = 2e-56
Identities = 109/169 (64%), Positives = 136/169 (80%), Gaps = 11/169 (6%)
Frame = +2
Query: 2477 RKMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIED 2656
++MV YSTE P F +K L+ EL++QG+IGE P+ +W+KN+V C LDIKNPD++IED
Sbjct: 846 QEMVAYSTERPFVHFQQKFAGLIQELKAQGYIGEEPMKYWAKNRVVCHLDIKNPDMVIED 905
Query: 2657 KPLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKER 2836
+PLKH+TPQ +ESF RH++ALL++G IRPS+SRHRTTAIIV+SGT+IDP TG+E KGKER
Sbjct: 906 RPLKHVTPQMEESFRRHVEALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKER 965
Query: 2837 LVFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
+VFNYKRLND T+KDQYSLPG I+SKFDLKSGF QVAM
Sbjct: 966 MVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFQQVAM 1014
Score = 66.2 bits (160), Expect = 4e-07
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = -3
Query: 2383 YPLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIET 2255
+ +++G+ IQ+ILGCNFIRSM GGVR+EGN +TFYK IT I T
Sbjct: 778 FEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQITSINT 820
Score = 65.1 bits (157), Expect = 9e-07
Identities = 34/50 (68%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH-DSKPFPVF 2190
D T+KDQYSLPGI TILQ++ S I+SKFDLKSGF QVAMH DS + F
Sbjct: 975 DLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFQQVAMHPDSVEWTAF 1024
>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
gb|AHI90954.1| polyprotein [Hibiscus bacilliform virus GD1]
Length = 1892
Score = 224 bits (572), Expect = 2e-56
Identities = 108/171 (63%), Positives = 130/171 (76%), Gaps = 11/171 (6%)
Frame = +2
Query: 2471 WCRKMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLII 2650
W R M + + P + L+ EL+ QG+IGENP+ HW++N+V C LDIKNPD++I
Sbjct: 1270 WIRTMASSTMDAPYEKLRSSFGPLMKELKDQGYIGENPMKHWARNKVLCYLDIKNPDMVI 1329
Query: 2651 EDKPLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGK 2830
EDKP+KH+TPQ +ESF +HIK LLEL VIRPS S+HRTTA IV+SGT++DP TG+ETKGK
Sbjct: 1330 EDKPIKHVTPQMEESFRKHIKGLLELKVIRPSTSKHRTTAFIVNSGTSVDPVTGKETKGK 1389
Query: 2831 ERLVFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
ER+VFNYKRLND T KDQYSLPG KIYSKFDLKSGFHQVAM
Sbjct: 1390 ERMVFNYKRLNDLTEKDQYSLPGINTIMKRVGHAKIYSKFDLKSGFHQVAM 1440
Score = 74.3 bits (181), Expect = 1e-09
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH 2166
D T KDQYSLPGINTI+++VG +KIYSKFDLKSGFHQVAMH
Sbjct: 1401 DLTEKDQYSLPGINTIMKRVGHAKIYSKFDLKSGFHQVAMH 1441
Score = 63.5 bits (153), Expect = 3e-06
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -3
Query: 2377 LELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIET 2255
L LG+ +Q +LGCNFIR+M GGVR+EG VTFYKNIT I+T
Sbjct: 1208 LTLGDDVQYVLGCNFIRNMHGGVRLEGTEVTFYKNITTIQT 1248
>gb|PKU61844.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 531
Score = 214 bits (544), Expect = 3e-56
Identities = 103/168 (61%), Positives = 129/168 (76%), Gaps = 11/168 (6%)
Frame = +2
Query: 2480 KMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIEDK 2659
+M + ++P F R+ L+ +L++ G+IG+NP+ HW N+VTC+LDIKNPD+ IED+
Sbjct: 208 RMSAHEIQIP-APFKRQFEGLIKQLQAAGYIGDNPIKHWLANKVTCQLDIKNPDITIEDR 266
Query: 2660 PLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKERL 2839
PLK +TPQ +ESF RHIKALL+L VIRP QS+HRTTA + SGTTI+P TG+E +GKER+
Sbjct: 267 PLKRVTPQMQESFQRHIKALLDLKVIRPCQSKHRTTAFLASSGTTINPVTGKEERGKERM 326
Query: 2840 VFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
VFNYKRLNDNTHKDQYSLPG +YSKFDLKSGFHQVAM
Sbjct: 327 VFNYKRLNDNTHKDQYSLPGINTIINKIGNCSVYSKFDLKSGFHQVAM 374
Score = 80.1 bits (196), Expect = 1e-11
Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH-DSKPFPVF 2190
DNTHKDQYSLPGINTI+ K+G +YSKFDLKSGFHQVAMH +S P+ F
Sbjct: 335 DNTHKDQYSLPGINTIINKIGNCSVYSKFDLKSGFHQVAMHPNSIPWTAF 384
Score = 67.4 bits (163), Expect = 1e-07
Identities = 28/41 (68%), Positives = 37/41 (90%)
Frame = -3
Query: 2383 YPLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPI 2261
+P+++GE IQM++GCNFIR+M GGVRIEG+ VTFYKN+T I
Sbjct: 146 FPMKIGEDIQMLIGCNFIRAMHGGVRIEGDEVTFYKNVTTI 186
>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 224 bits (570), Expect = 3e-56
Identities = 111/169 (65%), Positives = 131/169 (77%), Gaps = 11/169 (6%)
Frame = +2
Query: 2477 RKMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIED 2656
++MV + + FL+K LL EL+ GFIGENPL HW KN + C+LDIKNPD IIED
Sbjct: 1214 QEMVICNIGESRESFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIED 1273
Query: 2657 KPLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKER 2836
+PLK+LT Q KESF +HIK LL+LGVIR S+SRHRTTA++V+SGTT+DPKTG+E KGKER
Sbjct: 1274 RPLKNLTSQMKESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKGKER 1333
Query: 2837 LVFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
+VFNYKRLND THKDQYSLPG I+SKFDLKSGFHQVAM
Sbjct: 1334 MVFNYKRLNDITHKDQYSLPGINTILKKVGNSTIFSKFDLKSGFHQVAM 1382
Score = 77.4 bits (189), Expect = 2e-10
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH 2166
D THKDQYSLPGINTIL+KVG S I+SKFDLKSGFHQVAMH
Sbjct: 1343 DITHKDQYSLPGINTILKKVGNSTIFSKFDLKSGFHQVAMH 1383
Score = 70.1 bits (170), Expect = 3e-08
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = -3
Query: 2380 PLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIETLP 2249
PL +G++IQMI+GCNFIR+M GGVRIEGN VTFYKN+T I T P
Sbjct: 1151 PLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNLTRISTSP 1194
>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 224 bits (570), Expect = 3e-56
Identities = 111/169 (65%), Positives = 131/169 (77%), Gaps = 11/169 (6%)
Frame = +2
Query: 2477 RKMVCYSTEVPNKDFLRKINSLLHELRSQGFIGENPLLHWSKNQVTCKLDIKNPDLIIED 2656
++MV + + FL+K LL EL+ GFIGENPL HW KN + C+LDIKNPD IIED
Sbjct: 1214 QEMVICNIGESRESFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIED 1273
Query: 2657 KPLKHLTPQNKESFTRHIKALLELGVIRPSQSRHRTTAIIVHSGTTIDPKTGQETKGKER 2836
+PLK+LTPQ KESF +HIK LL+LGVIR S+SRHRTTA++V+SGTT+DPKTG+E K KER
Sbjct: 1274 RPLKNLTPQMKESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKRKER 1333
Query: 2837 LVFNYKRLNDNTHKDQYSLPG-----------KIYSKFDLKSGFHQVAM 2950
+VFNYKRLND THKDQYSLPG I+SKFDLKSGFHQVAM
Sbjct: 1334 MVFNYKRLNDITHKDQYSLPGINTILKKVGNSTIFSKFDLKSGFHQVAM 1382
Score = 77.4 bits (189), Expect = 2e-10
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +1
Query: 2044 DNTHKDQYSLPGINTILQKVGTSKIYSKFDLKSGFHQVAMH 2166
D THKDQYSLPGINTIL+KVG S I+SKFDLKSGFHQVAMH
Sbjct: 1343 DITHKDQYSLPGINTILKKVGNSTIFSKFDLKSGFHQVAMH 1383
Score = 70.1 bits (170), Expect = 3e-08
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = -3
Query: 2380 PLELGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNITPIETLP 2249
PL +G++IQMI+GCNFIR+M GGVRIEGN VTFYKN+T I T P
Sbjct: 1151 PLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNLTRISTSP 1194