BLASTX nr result

ID: Cheilocostus21_contig00006949 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00006949
         (672 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009403963.1| PREDICTED: pathogenesis-related genes transc...    92   2e-18
ref|XP_009390940.1| PREDICTED: pathogenesis-related genes transc...    64   2e-08

>ref|XP_009403963.1| PREDICTED: pathogenesis-related genes transcriptional activator
           PTI6-like [Musa acuminata subsp. malaccensis]
          Length = 310

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 47/78 (60%), Positives = 57/78 (73%), Gaps = 5/78 (6%)
 Frame = -2

Query: 671 ATEEQSIADLFKEQNLTLP-----FAFGSDMFHVGDVGSDLLPNELFSLDDLPMIEGDIE 507
           A EE SIADLF+ Q L LP     FAFGSD+F +GD+GS+LLPNE   L+DLP ++ DI 
Sbjct: 233 AAEEPSIADLFEGQGLPLPTCDAEFAFGSDLFILGDIGSELLPNEFLRLEDLPDMDDDIV 292

Query: 506 NLGFSSLEALDQWMDLDF 453
              F SLEAL+QWMD+DF
Sbjct: 293 GGDFPSLEALNQWMDIDF 310


>ref|XP_009390940.1| PREDICTED: pathogenesis-related genes transcriptional activator
           PTI6-like [Musa acuminata subsp. malaccensis]
          Length = 300

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
 Frame = -2

Query: 665 EEQSIADLFKEQNLTLP------FAFGSDMFHVGDVGSDLLPNELFSLDDLPMIEGDIEN 504
           EEQSIA+LF+ Q   LP      F FG D F + + GSDL  NEL  L DLP I+ +I++
Sbjct: 225 EEQSIAELFEGQGPPLPCPMEAEFGFGFDPFLMCNFGSDLYANELVPLADLP-IDDEIDD 283

Query: 503 LGFSSLEALDQWMDLDF 453
             F SL+ +++WMD DF
Sbjct: 284 GDFPSLDVIERWMDFDF 300


Top