BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00006887
         (4919 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su...  2954   0.0  
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su...  2925   0.0  
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su...  2924   0.0  
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial...  2919   0.0  
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su...  2914   0.0  
gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apos...  2911   0.0  
ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [An...  2899   0.0  
ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 iso...  2888   0.0  
ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [De...  2887   0.0  
ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 iso...  2887   0.0  
ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [As...  2882   0.0  
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su...  2873   0.0  
ref|XP_015649819.1| PREDICTED: DNA-directed RNA polymerase II su...  2861   0.0  
gb|PAN33683.1| hypothetical protein PAHAL_F01021 [Panicum hallii]    2854   0.0  
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...  2853   0.0  
ref|XP_004972809.1| DNA-directed RNA polymerase II subunit 1 [Se...  2850   0.0  
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su...  2849   0.0  
gb|KMZ69245.1| DNA-directed RNA polymerase [Zostera marina]          2838   0.0  
gb|OEL32462.1| DNA-directed RNA polymerase II subunit 1 [Dichant...  2836   0.0  
gb|OVA15969.1| RNA polymerase II [Macleaya cordata]                  2831   0.0  

>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
            subsp. malaccensis]
          Length = 1832

 Score = 2954 bits (7659), Expect = 0.0
 Identities = 1472/1543 (95%), Positives = 1501/1543 (97%), Gaps = 3/1543 (0%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MDTRFP+SPAEVAKV+TVQFGILSPDEIRQMSVVQIEHGETMERGKPKP GLSDPRLGTI
Sbjct: 1    MDTRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPAGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDTR 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPKNRLKRIYDACKSKKKC+           DSEEP+KKS+GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKKCSGGDDIDVQGQQDSEEPMKKSRGGCGAQQPNIT 180

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            IDGMKMVAEYKAPKKKSD+QEQLPEP ERKQILSAERVLSVLKRISDEDCLLLGLNPKYA
Sbjct: 181  IDGMKMVAEYKAPKKKSDEQEQLPEPAERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 240

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGH+IKIMPYS
Sbjct: 421  REDGQRLDLRYLKKSSDHHLELGYKVERHLCDGDFVLFNRQPSLHKMSIMGHKIKIMPYS 480

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 540

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NLIRFSAWH+ESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 601  NLIRFSAWHSESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVK+LIKLAQEKQ
Sbjct: 661  ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQEKQ 720

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721  LEAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE Q
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIEYQ 900

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            KFDSLKMKKGEF++VFRYE+DDD+WNPSY+QPEHVEDLKTIREFRNVFDAEVQKLEADRY
Sbjct: 901  KFDSLKMKKGEFDSVFRYEIDDDNWNPSYLQPEHVEDLKTIREFRNVFDAEVQKLEADRY 960

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEIATTGD ++PMPVNLKRLIWNAQ+TFKIDLRRPSDMHPMEIVEAIDKLQERLKVV
Sbjct: 961  QLGTEIATTGDISIPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDDFLSMEAQKNATLLFNILLRS+FASKRV+KEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLLFNILLRSSFASKRVMKEYRLTREAFEWVIGEIESRFLQSLVAP 1080

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED
Sbjct: 1141 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1260

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
            MNDD PKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFD++EGFK
Sbjct: 1261 MNDDAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDENEGFK 1320

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
            PDVEWMLDTEGVNLL+VMCHED+DATRTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1321 PDVEWMLDTEGVNLLAVMCHEDIDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEGD 1440

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSY---XXXXXXXXXXXMTPS 399
            HLRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIELQLPSY              MTPS
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMDGGFGGPGGFDFGMTPS 1500

Query: 398  RSPISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            RSPISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF
Sbjct: 1501 RSPISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 1543


>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
            guineensis]
          Length = 1842

 Score = 2925 bits (7584), Expect = 0.0
 Identities = 1457/1540 (94%), Positives = 1490/1540 (96%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSVVQIEH ETMERGKPKPGGLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPK+RLKRIYDACK+KKKCA           DSEEPIKKS+GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            IDGMKM+AEYKAPKKKSDDQEQLPEPVERKQ+LSAERVLSVLKRISDEDCLLLGL+PKYA
Sbjct: 181  IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPKYA 240

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421  REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NLIR SAWH+E+ETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 601  NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ
Sbjct: 661  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKK +F+ VF+YE+DDD+WNPSYM PEHVEDLKTIREFRNVFDAEVQKLEADRY
Sbjct: 901  KLDSLKMKKSDFDRVFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEIATTGD T P+PVNLKRLIWNAQ+TFKIDLRRPSDMHPMEIVEAIDKLQERLKVV
Sbjct: 961  QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDDFLSMEAQKNATL FNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP VNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEF DDLTCIFNDDNADKLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
            MND+ PKGELQDESAEDDVFLK+IESNMLTEMALRGIPDINKVFIKSGK+NRFD++EGFK
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKRIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEGFK 1320

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
             DVEWMLDTEGVNLL+VMCHEDVDATRTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 1440

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            HLRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIELQLPSY           MTPSRSP
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSY----MEGLEFGMTPSRSP 1496

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            ISGTPYHEGMMSPSYLLSPN+R+SPITDAQFSPYVGGM F
Sbjct: 1497 ISGTPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536


>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
            dactylifera]
          Length = 1842

 Score = 2924 bits (7579), Expect = 0.0
 Identities = 1457/1540 (94%), Positives = 1489/1540 (96%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDD R
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPK+RLKRIYDACK+KKKCA           DSEEPIKKS+GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            IDGMKM+AEYKAPKKKSDDQEQLPEPVERKQ+LSAERVLSVLKRISDEDCLLLGL+PKYA
Sbjct: 181  IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPKYA 240

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  TEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421  REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NLIR SAWH+E+ETGFITPGDTLVRIEKGELLSGTLCK+TLGTSTGSLIHVIWEEVGPDA
Sbjct: 601  NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ
Sbjct: 661  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKK EF+  F+YE+DDD+WNPSYM PEHVEDLKTIREFRNVFDAEVQKLEADRY
Sbjct: 901  KLDSLKMKKSEFDKGFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEIATTGD T P+PVNLKRLIWNAQ+TFKIDLRRPSDMHPMEIVEAIDKLQERLKVV
Sbjct: 961  QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDDFLSMEAQKNATL FNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP VNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEF DDLTCIFNDDNADKLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
            MND+ PKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGK+NRFD +EGFK
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDDNEGFK 1320

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
             DVEWMLDTEGVNLL+VMCHEDVDATRTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1440

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            +LRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIELQLPSY           MTPSRSP
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSY----MEGLDFGMTPSRSP 1496

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            ISGTPYHEGMMSPSYLLSPN+R+SPITDAQFSPYVGGMAF
Sbjct: 1497 ISGTPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMAF 1536


>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
          Length = 1705

 Score = 2919 bits (7568), Expect = 0.0
 Identities = 1454/1540 (94%), Positives = 1487/1540 (96%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MDTRFPYSPAEVAKV+ VQFGILSPDEIRQMSVVQIEH ETMERGKPKPGGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPK+RLKRIYDACK+KKKCA           DSEEP+KKS+GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNIT 180

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            IDGMKM+AEYKAPKKKSDDQEQLPEPVERKQ+LSAERVLSVLKRISDEDCLLLGLNPKYA
Sbjct: 181  IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLNPKYA 240

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241  RPDWMILQVLPIPLPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421  REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NLIR SAWH+E+ETGFITPGDTLVRIEKG LLSGTLCK+TLGTSTGSLIHVIWEEVGPDA
Sbjct: 601  NLIRTSAWHSEAETGFITPGDTLVRIEKGXLLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ
Sbjct: 661  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKK EF+  F+YE+DDD+WNPSYM PEHVEDLKTIREFRNVFDAEVQKLEADRY
Sbjct: 901  KLDSLKMKKSEFDKFFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEIATTGD T P+PVNLKRLIWNAQ+TFKIDLRRPSDMHPMEIVEAIDKLQERLKVV
Sbjct: 961  QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDDFLSMEAQKNATL FNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            K  VNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED
Sbjct: 1141 KSEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEF DDLTCIFNDDNADKLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
            MND+GPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGK+NRFD+++GFK
Sbjct: 1261 MNDEGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDENDGFK 1320

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
             DVEWMLDTEGVNLL+VMCHEDVDATRTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVD LLDAAV+AE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDXLLDAAVFAETD 1440

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            HLRGVTENIMLGQLAPIGTG CALYLNDQMLQ AIELQLPSY           MTPSRSP
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQXAIELQLPSY----MEGLDFGMTPSRSP 1496

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            ISGTPYHEGMMSPSYLLSPN+R+SPITDAQFSPYVGGM F
Sbjct: 1497 ISGTPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536


>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
            guineensis]
          Length = 1842

 Score = 2914 bits (7555), Expect = 0.0
 Identities = 1451/1540 (94%), Positives = 1486/1540 (96%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSV QIEHGETMERGKPKPGGLSDPRLGTI
Sbjct: 1    MDVRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPK+RLKRI DACKSKKKCA           DSEEPIKKS+GGCG+QQP IT
Sbjct: 121  FKQALKIRNPKHRLKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKSRGGCGSQQPTIT 180

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            IDGMKMVAEYKAPKKKSDDQ+QLPEPVERKQILSA+RVLSVLKRISDEDC+LLGLNP+YA
Sbjct: 181  IDGMKMVAEYKAPKKKSDDQDQLPEPVERKQILSADRVLSVLKRISDEDCILLGLNPQYA 240

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421  REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDTFIE DVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEMDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NLIR SAWH+E+ETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 601  NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FS+GIGDTIADA TMEKINETISKAKNDVKELIKLAQEKQ
Sbjct: 661  ARKFLGHTQWLVNYWLLQNGFSMGIGDTIADAVTMEKINETISKAKNDVKELIKLAQEKQ 720

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKK EF+ +FRYE+DD++WNPSYM PEHVEDLKTIREF+NVFDAEVQKLEADRY
Sbjct: 901  KLDSLKMKKSEFDKIFRYEIDDNNWNPSYMLPEHVEDLKTIREFKNVFDAEVQKLEADRY 960

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEI TTGD T PMPVNLKRLIWNAQ+TFKIDLRRPSDMHPMEIVEAIDKLQERLKVV
Sbjct: 961  QLGTEIVTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDDFLSMEAQKNATL FNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP VNKKKELAKNVQ ALEYTTLRSVTHATE+WYDPDPMSTIIEEDVEFVKSYYEMPDED
Sbjct: 1141 KPEVNKKKELAKNVQTALEYTTLRSVTHATEVWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            IAPEKISPWLLR+ELNREMMVDKKLSMADIAEKINHEF  D+TCIFNDDNADKLILRIRI
Sbjct: 1201 IAPEKISPWLLRVELNREMMVDKKLSMADIAEKINHEFGSDITCIFNDDNADKLILRIRI 1260

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
            MND+ PKG+LQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGK+NRFD++EGFK
Sbjct: 1261 MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDETEGFK 1320

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
             DVEWMLDTEGVNLL+VMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1380

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVY+EAD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYSEAD 1440

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            HLRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIELQLPSY           MTPSRSP
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSY----MEGLDFGMTPSRSP 1496

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            ISGTPYHEGMMSPSYLLSPN+R+SPITDAQFSPYVGGMAF
Sbjct: 1497 ISGTPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMAF 1536


>gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apostasia shenzhenica]
          Length = 1806

 Score = 2911 bits (7546), Expect = 0.0
 Identities = 1444/1540 (93%), Positives = 1487/1540 (96%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            M+TRF YSPAEVAKV+ VQFGILSPDEIRQMSV QIEHGETMERGKPK GGLSDPRLGTI
Sbjct: 1    METRFAYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKAGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVCFNCSKILADEDD R
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDDTR 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPKNRL+RIYDACKSKKKCA           DSEEPIKKS+GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKNRLRRIYDACKSKKKCAGGDDIDVQGQQDSEEPIKKSRGGCGAQQPNIT 180

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQ+LSAERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 181  IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPKYA 240

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAM+IRHNENLRRQERNGAPAHII
Sbjct: 241  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLRRQERNGAPAHII 300

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421  REDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRP WTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPFWTGKQVFNLIIPKQI 600

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NL+R+SAWHAESETGFITPGDT VRIEKGELLSGTLCKKT+GTS+GSLIHVIWEEVGPDA
Sbjct: 601  NLVRYSAWHAESETGFITPGDTQVRIEKGELLSGTLCKKTMGTSSGSLIHVIWEEVGPDA 660

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ
Sbjct: 661  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKK EF  V+RYE+DDD+WNPSY+ PEHVEDLKTI+EF+NVFDAEVQKLEADRY
Sbjct: 901  KLDSLKMKKSEFEKVYRYEIDDDNWNPSYLLPEHVEDLKTIQEFKNVFDAEVQKLEADRY 960

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEIATTGD +  MPVNLKRLIWNAQ+TFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961  QLGTEIATTGDNSWAMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 1020

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDDFLSMEAQKNATL FNILLRSTFASKRV+KEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVMKEYRLTREAFEWVIGEIESRFLQSLVAP 1080

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP VNK+KELAKNVQCALEYTTLRSVTHATE+WYDPDPMSTIIEEDVEFVKSYYEMPDE+
Sbjct: 1141 KPEVNKRKELAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 1200

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            +APEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1260

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
            MN D PKGELQD++AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKIN+FD+SEGFK
Sbjct: 1261 MNYDAPKGELQDDTAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDESEGFK 1320

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
            PD+EWMLDTEGVNLL+VMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD
Sbjct: 1321 PDIEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1380

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLM+ITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMSITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESD 1440

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            HLRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIELQLPSY           MTP+RSP
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSY----MEGLDFGMTPARSP 1496

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            ISGTPYHEGMMSPSYLLSPNIR+SPITDAQFSPYVGGMAF
Sbjct: 1497 ISGTPYHEGMMSPSYLLSPNIRSSPITDAQFSPYVGGMAF 1536


>ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [Ananas comosus]
 gb|OAY68410.1| DNA-directed RNA polymerase II subunit rpb1 [Ananas comosus]
          Length = 1854

 Score = 2899 bits (7515), Expect = 0.0
 Identities = 1440/1540 (93%), Positives = 1482/1540 (96%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFP+SPAEVAKV+TVQFGILSPDEIRQMSVVQIEH ETMERGKPKPGGLSDPRLGTI
Sbjct: 1    MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDD R
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPKNRLKRIYDACKSKK+CA           D++EP+KKS+GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKRCAGGDDIDVQGQQDTDEPVKKSRGGCGAQQPNIT 180

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            +DGMKMVAE+KA KKKSDDQEQLPEPVERKQILSAERVL+VLKRISDEDCLLLGLNPKYA
Sbjct: 181  VDGMKMVAEFKASKKKSDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYA 240

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRYLKKSSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421  REDGQRLDLRYLKKSSDQHLELGYKVERHLQDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NLIR SAWH ESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 601  NLIRTSAWHLESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKN+VKELIKLAQEKQ
Sbjct: 661  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIKLAQEKQ 720

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIPFGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKK EF+ VF YE+DD +WNPSYM PEHV+DLK+I+EFRNVF+AEVQKLEADR 
Sbjct: 901  KLDSLKMKKSEFDNVFTYEIDDPNWNPSYMLPEHVDDLKSIKEFRNVFEAEVQKLEADRI 960

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEIATTGD T PMPVNLKRLIWNAQ+TFKIDLRRPSDMHPMEIVEAIDKLQERLKVV
Sbjct: 961  QLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDD +S+EAQKNATL FNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDLMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP +NKKKE+AKNVQCALEYTTLRSVTHATEIWYDPDP+ T+IEEDVEFVKSYYEMPDED
Sbjct: 1141 KPEINKKKEMAKNVQCALEYTTLRSVTHATEIWYDPDPLGTLIEEDVEFVKSYYEMPDED 1200

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1260

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
            MND+ PKGELQDESAEDDVFLKKIESNMLTEMALRGIPDI+KVFIKSGK+NRFD+SEGFK
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDIHKVFIKSGKVNRFDKSEGFK 1320

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
            PDVEWMLDTEGVNLL+VMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD
Sbjct: 1321 PDVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1380

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESD 1440

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            HLRGVTENIMLGQLAPIGTG C+LYLNDQMLQQAIELQLPSY           MTP+RSP
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGGCSLYLNDQMLQQAIELQLPSY----IEGLEFGMTPARSP 1496

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            ISGTPYHE MMSPSY +SPN+R+SPITDAQFSPYVGGM F
Sbjct: 1497 ISGTPYHESMMSPSYFMSPNVRSSPITDAQFSPYVGGMVF 1536


>ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 isoform X2 [Phalaenopsis
            equestris]
          Length = 1827

 Score = 2888 bits (7486), Expect = 0.0
 Identities = 1433/1540 (93%), Positives = 1480/1540 (96%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSV QIEHGETMERGKPKPGGLSDPRLGTI
Sbjct: 1    MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRKMKCETCMANMAEC GHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61   DRKMKCETCMANMAECSGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDAR 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPKNRLKRIYDACKSKKKCA           DSEEP+KKS+GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQSQQDSEEPVKKSRGGCGAQQPNIT 180

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQ+LSAERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 181  IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPKYA 240

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421  REDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NL+RFSAWHAESETGFITPGDT VRIEKGELLSGTLCKKT+GTSTGSLIHVIWEEVGPD+
Sbjct: 601  NLVRFSAWHAESETGFITPGDTQVRIEKGELLSGTLCKKTMGTSTGSLIHVIWEEVGPDS 660

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FSIGIGDTIAD ATMEKINETISKAKNDVK LIK AQ+K 
Sbjct: 661  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADVATMEKINETISKAKNDVKVLIKEAQDKV 720

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFENRVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721  LEAEPGRTMMESFENRVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQM 780

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIP+GFI RTLPHFTK+DYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPYGFIGRTLPHFTKNDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKK EF+ V+RYE+DD++W+PSYM PEHVEDLKTI EF+NVFDAEVQKL  DRY
Sbjct: 901  KLDSLKMKKAEFDKVYRYEIDDNNWSPSYMLPEHVEDLKTIPEFKNVFDAEVQKLVVDRY 960

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEI TTGD + PMPVNLKRLIWNAQ+TFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961  QLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 1020

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDDFLSMEAQKNATL FNILLRSTFASKRVLKE+RLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEFRLTREAFEWVIGEIESRFLQSLVAP 1080

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP +NK KELAKNVQCALEYTTLRSVTHATE+WYDPDPMSTIIEED EFV+SYYEMPDE+
Sbjct: 1141 KPEINKLKELAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDAEFVRSYYEMPDEE 1200

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            +APEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1260

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
            MND+ PKGELQD++AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKIN+FD++EGFK
Sbjct: 1261 MNDEAPKGELQDDTAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENEGFK 1320

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
            PD EWMLDTEGVNLL+VMCHEDVDA+RTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD
Sbjct: 1321 PDTEWMLDTEGVNLLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1380

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESD 1440

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            +LRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIELQLPSY           MTP+RSP
Sbjct: 1441 NLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSY----MEGLDFGMTPARSP 1496

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            ISGTPYHEGMMSPSYLLSPNIR+SPITDAQFSPYVGGMAF
Sbjct: 1497 ISGTPYHEGMMSPSYLLSPNIRSSPITDAQFSPYVGGMAF 1536


>ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [Dendrobium catenatum]
          Length = 1841

 Score = 2887 bits (7484), Expect = 0.0
 Identities = 1436/1540 (93%), Positives = 1477/1540 (95%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSV QIEHGETMERGKPKPGGLSDPRLGTI
Sbjct: 1    MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRKMKCETCMANMAEC GHFGHLELAKPM+HIGF+KTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61   DRKMKCETCMANMAECSGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPKNRLKRIYDACKSKKKCA           DSEEPIKKS+GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQGQQDSEEPIKKSRGGCGAQQPNIT 180

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            +DGMKMVAEYKAPKKKS+DQEQLPEPVERKQILSAERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 181  VDGMKMVAEYKAPKKKSEDQEQLPEPVERKQILSAERVLSVLKRISDEDCQLLGLNPKYA 240

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421  REDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NLIRFSAWHAESETGFITPGDT VRIE+GELLSGTLCKKT+GTSTGSLIHVIWEEVGPDA
Sbjct: 601  NLIRFSAWHAESETGFITPGDTQVRIERGELLSGTLCKKTMGTSTGSLIHVIWEEVGPDA 660

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FSIGIGDTIAD ATMEKINETISKAKNDVKELIK AQEKQ
Sbjct: 661  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADVATMEKINETISKAKNDVKELIKQAQEKQ 720

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LE EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721  LEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIP+GF+ RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPYGFLGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DS+KMKK EF+ V+RYE+DD++WNPSYM PEHVEDLKTIREF+NVFDAEVQKL  DRY
Sbjct: 901  KLDSVKMKKVEFDKVYRYEIDDNNWNPSYMLPEHVEDLKTIREFKNVFDAEVQKLVVDRY 960

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEI T GD + PMPVNLKRLIWNAQ+TFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961  QLGTEITTGGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 1020

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP VNKKKELAKNVQCALEYTTLRSVTHATE+WYDPDP STIIEED EFVKSYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEVWYDPDPTSTIIEEDFEFVKSYYEMPDEE 1200

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            + PEKISPWLLRIELNREMMVDKKLSMA IAEKIN EFDDDLTCIFNDDNA KLILRIRI
Sbjct: 1201 VVPEKISPWLLRIELNREMMVDKKLSMAAIAEKINREFDDDLTCIFNDDNAVKLILRIRI 1260

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
            MND+ PKGELQD++AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKIN+FD+ EGFK
Sbjct: 1261 MNDEAPKGELQDDTAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDEDEGFK 1320

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
            PDVEWMLDTEGVNLL+VMCHE+VDA+RTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD
Sbjct: 1321 PDVEWMLDTEGVNLLAVMCHENVDASRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1380

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AEAD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAEAD 1440

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            HLRGVTENIMLGQLAPIGTG CALYLND+MLQQAIELQLPSY           MTP+RSP
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGGCALYLNDKMLQQAIELQLPSY----MEGLEFGMTPARSP 1496

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            ISGTPYHEGMMSPSYLLSPNIR+SPITDAQFSPYVGGMAF
Sbjct: 1497 ISGTPYHEGMMSPSYLLSPNIRSSPITDAQFSPYVGGMAF 1536


>ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 isoform X1 [Phalaenopsis
            equestris]
          Length = 1827

 Score = 2887 bits (7483), Expect = 0.0
 Identities = 1433/1540 (93%), Positives = 1480/1540 (96%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSV QIEHGETMERGKPKPGGLSDPRLGTI
Sbjct: 1    MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRKMKCETCMANMAEC GHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61   DRKMKCETCMANMAECSGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDAR 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPKNRLKRIYDACKSKKKCA           DSEEP+KKS+GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQSQQDSEEPVKKSRGGCGAQQPNIT 180

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQ+LSAERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 181  IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPKYA 240

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421  REDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NL+RFSAWHAESETGFITPGDT VRIEKGELLSGTLCKKT+GTSTGSLIHVIWEEVGPD+
Sbjct: 601  NLVRFSAWHAESETGFITPGDTQVRIEKGELLSGTLCKKTMGTSTGSLIHVIWEEVGPDS 660

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FSIGIGDTIAD ATMEKINETISKAKNDVK LIK AQ+K 
Sbjct: 661  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADVATMEKINETISKAKNDVKVLIKEAQDKV 720

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFENRVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721  LEAEPGRTMMESFENRVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQM 780

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIP+GFI RTLPHFTK+DYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPYGFIGRTLPHFTKNDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKK EF+ V+RYE+DD++W+PSYM PEHVEDLKTI EF+NVFDAEVQKL  DRY
Sbjct: 901  KLDSLKMKKAEFDKVYRYEIDDNNWSPSYMLPEHVEDLKTIPEFKNVFDAEVQKLVVDRY 960

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEI TTGD + PMPVNLKRLIWNAQ+TFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961  QLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 1020

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDDFLSMEAQKNATL FNILLRSTFASKRVLKE+RLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEFRLTREAFEWVIGEIESRFLQSLVAP 1080

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP +NK KELAKNVQCALEYTTLRSVTHATE+WYDPDPMSTIIEED EFV+SYYEMPDE+
Sbjct: 1141 KPEINKLKELAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDAEFVRSYYEMPDEE 1200

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            +APEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1260

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
            MND+ PKGELQD++AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKIN+FD++EGFK
Sbjct: 1261 MNDEAPKGELQDDTAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENEGFK 1320

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
            PD EWMLDTEGVNLL+VMCHEDVDA+RTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD
Sbjct: 1321 PDNEWMLDTEGVNLLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1380

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESD 1440

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            +LRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIELQLPSY           MTP+RSP
Sbjct: 1441 NLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSY----MEGLDFGMTPARSP 1496

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            ISGTPYHEGMMSPSYLLSPNIR+SPITDAQFSPYVGGMAF
Sbjct: 1497 ISGTPYHEGMMSPSYLLSPNIRSSPITDAQFSPYVGGMAF 1536


>ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [Asparagus officinalis]
 gb|ONK55404.1| uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
          Length = 1843

 Score = 2882 bits (7470), Expect = 0.0
 Identities = 1430/1540 (92%), Positives = 1478/1540 (95%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFP+SPAEVAKV+TVQFGILSPDEIRQMSVVQ+EHGETMERGKPK  GLSDPRLGTI
Sbjct: 1    MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVAGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADEDD R
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEDDVR 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPKNRLKRIYDACKSKKKCA           DS+EP+KKS+GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDVQGQQDSDEPVKKSRGGCGAQQPNIT 180

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            IDGMKMVAEYKA KKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGLNPKYA
Sbjct: 181  IDGMKMVAEYKATKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 240

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241  RPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421  REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NL R SAWH+ESETGFITPGDT VRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 601  NLSRASAWHSESETGFITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDA 660

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVK+LIKLAQ+KQ
Sbjct: 661  ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 720

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721  LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKK EFN V+RYE+DD+ W+PSYM PEHVEDLKTI EFRNVFDAEVQKLEADR+
Sbjct: 901  KLDSLKMKKKEFNNVYRYEIDDNQWDPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRF 960

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGT+IATTGD T PMPVNLKRLIWNAQ+TFK+D RRPSDMHPMEIVEA+DKLQE+L+VV
Sbjct: 961  QLGTDIATTGDNTWPMPVNLKRLIWNAQKTFKVDPRRPSDMHPMEIVEAVDKLQEKLRVV 1020

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+L
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFL 1140

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP ++KKKELAKNVQCALEYTTLRSVTHATE+WYDP+PMSTIIEEDV+FV SYYEMPDE+
Sbjct: 1141 KPEISKKKELAKNVQCALEYTTLRSVTHATEVWYDPNPMSTIIEEDVDFVNSYYEMPDEE 1200

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            +APEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1260

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
            MNDD PKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGK+NRFD++EGFK
Sbjct: 1261 MNDDAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEGFK 1320

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
            PDVEW LDTEGVNLL+VMCHEDVD TRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFD
Sbjct: 1321 PDVEWTLDTEGVNLLAVMCHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFD 1380

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 1440

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            HLRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIELQLPSY           MTP+RSP
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSY----MEGLDFGMTPARSP 1496

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            ISGTPYHEG+MSPSYLLSPNIR+SP TDAQFSPYV  M F
Sbjct: 1497 ISGTPYHEGIMSPSYLLSPNIRSSPFTDAQFSPYVNNMPF 1536


>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Oryza
            brachyantha]
          Length = 1855

 Score = 2873 bits (7447), Expect = 0.0
 Identities = 1424/1540 (92%), Positives = 1478/1540 (95%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFPYSPAEVAKVQ VQFGILSPDEIRQMSVVQIEH ETMERGKPKPGGLSDPRLGTI
Sbjct: 1    MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRK+KCETCMA MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADEDD +
Sbjct: 61   DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPKNRLKRIYDACKSKK CA           D++EP+K+ +GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKR-RGGCGAQQPNIT 179

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            +DGMKMVAE+KAPKKK+DDQEQLPEPVERKQILSAERVL+VLKRISDEDCLLLGLNPK+A
Sbjct: 180  VDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360  RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420  REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDT IEKDVFMNILMWWEDFDGK+PAPAILKPRP+WTGKQVFNLIIPK I
Sbjct: 540  TLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKPI 599

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NLIRFSAWH+E+ETGFITPGDT+VRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 600  NLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 659

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKN+VKELIK A +K 
Sbjct: 660  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISTAKNEVKELIKQAHDKH 719

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780  TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 840  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKKGEF+TVFRYELDD++W P+YM PEHVEDLKTIREFRNVF+AEVQKLEADR+
Sbjct: 900  KLDSLKMKKGEFDTVFRYELDDENWRPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRF 959

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEIATTGD T PMPVNLKRLIWNAQ+TFKIDLRRPSDMHPMEIVEAIDKLQERLKVV
Sbjct: 960  QLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1019

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDD +S+EAQKNATL FNILLRSTFASKRVLKEYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAP 1079

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP VNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDP+ TIIEEDVEFV+SYYEMPDED
Sbjct: 1140 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDED 1199

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            + P+KISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDL+CIFNDDNADKLILR+RI
Sbjct: 1200 VDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRI 1259

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
             ND+ PKGE+QDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GK+N+F+ ++GFK
Sbjct: 1260 TNDEAPKGEIQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKYGKVNKFEDNDGFK 1319

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
            PD EWMLDTEGVNLL+VMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD
Sbjct: 1320 PDNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1379

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESD 1439

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            +LRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIELQLPSY           MTP+RSP
Sbjct: 1440 YLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSY----VEGLDFGMTPARSP 1495

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF
Sbjct: 1496 ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 1535


>ref|XP_015649819.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Oryza sativa
            Japonica Group]
          Length = 1855

 Score = 2861 bits (7416), Expect = 0.0
 Identities = 1420/1540 (92%), Positives = 1475/1540 (95%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFPYSPAEVAKVQ VQFGILSPDEIRQMSVVQIEH ETMERGKPKPGGLSDPRLGTI
Sbjct: 1    MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            D+K+KCETCMA MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADEDD +
Sbjct: 61   DQKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPKNRLKRIYDACKSKK CA           D++EP+KK +GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNIT 179

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            +DGMKMVAE+KAPKKK+DDQEQLPEPVERKQILSAERVL+VLKRISDEDCLLLGLNPK+A
Sbjct: 180  VDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360  RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420  REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDT IEKDVFMNILMWWEDFDGK+PAPAILKPRP+WTGKQVFNLIIPK I
Sbjct: 540  TLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKPI 599

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NLIRFSAWH+E+ETGFITPGDT+VRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 600  NLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 659

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATM KINETISKAK+DVKELI  A +KQ
Sbjct: 660  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMVKINETISKAKDDVKELIMQAHDKQ 719

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780  TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDI+VKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 840  EGLIDTAVKTSETGYIQRRLVKAMEDIIVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKKGEF+ VFRYELDD++W P+YM PEHV+DLKTIREFRNVF+AEVQKLEADR+
Sbjct: 900  KLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRF 959

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLG+EIATTGD T PMPVNLKRLIWNAQ+TFKIDLRRPSDMHPMEIVEAIDKLQERLKVV
Sbjct: 960  QLGSEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1019

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDD +S+EAQKNATL FNILLRSTFASKRVLKEYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAP 1079

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP VNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDP+ TIIEEDVEFV+SYYEMPDED
Sbjct: 1140 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDED 1199

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            I P+KISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDL+CIFNDDNADKLILR+RI
Sbjct: 1200 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRI 1259

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
             ND+ PKGE+QDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GK+N+F+ + GFK
Sbjct: 1260 TNDEAPKGEIQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKYGKVNKFEDNVGFK 1319

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
             D EWMLDTEGVNLL+VMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD
Sbjct: 1320 ADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1379

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESD 1439

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            +LRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIELQLPSY           MTP+RSP
Sbjct: 1440 YLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSY----VEGLDFGMTPARSP 1495

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF
Sbjct: 1496 ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 1535


>gb|PAN33683.1| hypothetical protein PAHAL_F01021 [Panicum hallii]
          Length = 1857

 Score = 2854 bits (7398), Expect = 0.0
 Identities = 1416/1541 (91%), Positives = 1473/1541 (95%), Gaps = 1/1541 (0%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFPYSPAEVAKVQ VQFGILSPDEIRQMSV+QIEH ETMERGKPKPGGLSDPRLGTI
Sbjct: 1    MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRK+KCETCMA MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADEDD +
Sbjct: 61   DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPKNRLKRIYDACKSKK CA           D++EP+KK +GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQDQHDTDEPVKK-RGGCGAQQPNIT 179

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            +DGMKMVAE+KAPKKK+DDQ+QLPEPVERKQILSAERVL+VLKRISDEDCLLLGLNPK+A
Sbjct: 180  VDGMKMVAEFKAPKKKNDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360  RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420  REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDT IEKDVFMNILMWW+DFDGKIPAPAILKPRP+WTGKQVFNLIIPKQI
Sbjct: 540  TLLGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQI 599

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NLIRFSAWH+E+ETGFITPGDT+VRIEKGELLSGTLCKK+LGT +GSLIHVIWEEVGPDA
Sbjct: 600  NLIRFSAWHSETETGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDA 659

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNDVKELIK AQ+KQ
Sbjct: 660  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKQAQDKQ 719

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIPFGFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780  TACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGR 839

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 840  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKK EF+ VFRYELDD++W P+YM PEHV+DLKTIREFRNVF+AEVQKLEADR+
Sbjct: 900  KLDSLKMKKAEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRF 959

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEIATTGD   PMPVNLKRLIWNAQ+TFKID RRPSDMHPMEIVEAIDKLQERLKVV
Sbjct: 960  QLGTEIATTGDNAWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVV 1019

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDD +S+EAQKNATL FNILLRSTFASKRVLKEYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAP 1079

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP VNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDP+ TIIEEDVEFV+SYYEMPDED
Sbjct: 1140 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDED 1199

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            + P+KISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDL+CIFNDDNADKLILRIRI
Sbjct: 1200 VDPDKISPWLLRIELNREMMVDKKLSMADIAEKINREFDDDLSCIFNDDNADKLILRIRI 1259

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
             NDD PKGE+QDESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK GK+N+F+Q++GFK
Sbjct: 1260 TNDDAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKHGKVNKFEQNDGFK 1319

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
             D EWMLDTEGVNLL+VMCHEDVDATRTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1320 ADQEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESD 1439

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            HLRGVTENIMLGQLAPIGTG C+LYLNDQMLQQAIELQLPSY           MTP+RSP
Sbjct: 1440 HLRGVTENIMLGQLAPIGTGGCSLYLNDQMLQQAIELQLPSY----VEGLDFGMTPARSP 1495

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPI-TDAQFSPYVGGMAF 270
            ISGTPYHEGMMSPSYLLSPNIRASPI TDA FSPYVG MAF
Sbjct: 1496 ISGTPYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1536


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
          Length = 1848

 Score = 2853 bits (7395), Expect = 0.0
 Identities = 1414/1540 (91%), Positives = 1471/1540 (95%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSVVQIEH ET ERGKPKPGGLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQA K+RNPKNRLK+I DACK+K KC             S+EP+KKS+GGCGAQQP +T
Sbjct: 121  FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALD-SDEPVKKSRGGCGAQQPKLT 179

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            I+GMKM+AEYK  +KK+DD EQLPEPVERKQ LSAERVL+VLKRISDEDC+LLGLNPKYA
Sbjct: 180  IEGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYA 239

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            SEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300  SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420  REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 599

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NL+R SAWH+ESETGFITPGDT VRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 600  NLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDA 659

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKN+VKELI+ AQE+Q
Sbjct: 660  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQ 719

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780  TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 840  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQ 899

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKKGEF+ VF+YE+DD++WNPSYM PEHVEDLKTIREFRNVFDAEVQKLEADR+
Sbjct: 900  KLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRF 959

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEIATTGD + PMPVNLKRLIWNAQ+TFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 960  QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 1019

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDD +SMEAQKNATL FNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1079

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP V+K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDV+FVKSYYEMPDE+
Sbjct: 1140 KPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 1199

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            +APEKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1200 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1259

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
            MND+ PKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGK+N+FD+SEGFK
Sbjct: 1260 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFK 1319

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
            P+VEWMLDTEGVNLL+VMCHEDVDA RTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1320 PEVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1439

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
             LRGVTENIMLGQLAPIGTG CALYLNDQMLQ AIELQLPSY           MTPSRSP
Sbjct: 1440 FLRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSY----MEGLDFGMTPSRSP 1495

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            I+GTPYH+GMMSP+YLLSPN+R SPITDAQFSPYVGGMAF
Sbjct: 1496 ITGTPYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535


>ref|XP_004972809.1| DNA-directed RNA polymerase II subunit 1 [Setaria italica]
 gb|KQL00756.1| hypothetical protein SETIT_013115mg [Setaria italica]
          Length = 1852

 Score = 2850 bits (7389), Expect = 0.0
 Identities = 1417/1541 (91%), Positives = 1470/1541 (95%), Gaps = 1/1541 (0%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFPYSPAEVAKVQ VQFGILSPDEIRQMSV+QIEH ETMERGKPKPGGLSDPRLGTI
Sbjct: 1    MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRK+KCETCMA MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADEDD +
Sbjct: 61   DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPKNRLKRIYDACKSKK CA           D++EP+KK +GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNIT 179

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            +DGMKMVAE+KAPKKK+DDQ+QLPEPVERKQILSAERVL+VLKRISDEDCLLLGLNPK+A
Sbjct: 180  VDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360  RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420  REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDT IEKDVFMN LMWW+DFDGKIPAPAILKPRP+WTGKQVFNLIIPKQI
Sbjct: 540  TLLGCRKITKRDTLIEKDVFMNTLMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQI 599

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NLIRFSAWH+E+ETGFITPGDT+VRIEKGELLSGTLCKK+LGT +GSLIHVIWEEVGPDA
Sbjct: 600  NLIRFSAWHSETETGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDA 659

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQ  FSIGIGDTIADAATMEKINETISKAKN+VKELIK AQ+K 
Sbjct: 660  ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISKAKNEVKELIKQAQDKH 719

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780  TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 840  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKKGEF+ VFRYELDD++W P+YM PEHV+DLKTIREFRNVF+AEVQKLEADR+
Sbjct: 900  KLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRF 959

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEI TTGD + PMPVNLKRLIWNAQ+TFKID RRPSDMHPMEIVEAIDKLQERLKVV
Sbjct: 960  QLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVV 1019

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDD +S+EAQKNATL FNILLRSTFASKRVLKEYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAP 1079

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP VNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDP+ TIIEEDVEFV+SYYEMPDED
Sbjct: 1140 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDED 1199

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            I P+KISPWLLRIELNREMM+DKKLSMADIAEKIN EFDDDL+CIFNDDNADKLILRIRI
Sbjct: 1200 IDPDKISPWLLRIELNREMMIDKKLSMADIAEKINREFDDDLSCIFNDDNADKLILRIRI 1259

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
             NDD PKGE+QDESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK GK+N+FDQSEGFK
Sbjct: 1260 TNDDAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKHGKVNKFDQSEGFK 1319

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
             D EWMLDTEGVNLL+VMCHEDVDATRTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1320 ADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAEAD
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAEAD 1439

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
             LRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIELQLPSY           MTP+RSP
Sbjct: 1440 LLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSY----VEGLDFGMTPARSP 1495

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPI-TDAQFSPYVGGMAF 270
            ISGTPYHEGMMSPSYLLSPNIRASPI TDA FSPYVG MAF
Sbjct: 1496 ISGTPYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1536


>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
            nucifera]
          Length = 1848

 Score = 2849 bits (7386), Expect = 0.0
 Identities = 1417/1540 (92%), Positives = 1468/1540 (95%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MDTRFPYSPAEV+KV+ VQFGILSPD IRQMSVVQIEH ET E+GKPKPGGLSD RLGTI
Sbjct: 1    MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQA ++RNPKNRLK++ DACK+K KC              E PIKK +GGCGAQQP +T
Sbjct: 121  FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQDTGE-PIKKRRGGCGAQQPKLT 179

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            I+GMKM+AEYKA +KK+DDQEQLPEPVERKQ LSAERVLSVLKRISDEDC+LLGLNP+YA
Sbjct: 180  IEGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYA 239

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300  SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420  REDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 599

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NL+R SAWH+ESETGFITPGDT VRIE+GELL+GTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 600  NLMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDA 659

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKN+VKELI+ AQE+Q
Sbjct: 660  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQ 719

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780  TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 840  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQ 899

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKM+K EF+ VFRYE+DD++WNPSYM PEHVEDLKTIREFRNVFDAEVQKLEADRY
Sbjct: 900  KLDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 959

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEIATTGD   PMPVNLKRLIWNAQ+TFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 960  QLGTEIATTGDNNWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 1019

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDDFLSMEAQKNATL FNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1079

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP VNK KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDV+FVKSYYEMPDE+
Sbjct: 1140 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 1199

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            +APEKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1200 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1259

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
            MND+ PKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGK+N+FD+SEGFK
Sbjct: 1260 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFK 1319

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
            P+VEWMLDTEGVNLL+VMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD
Sbjct: 1320 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1379

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1439

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
             LRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIELQLPSY           MTPSRSP
Sbjct: 1440 CLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSY----MEGLDFGMTPSRSP 1495

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            I GTPY+EGMMSPSYLLSPN R SPITDAQFSPYVGGMAF
Sbjct: 1496 IMGTPYNEGMMSPSYLLSPNARLSPITDAQFSPYVGGMAF 1535


>gb|KMZ69245.1| DNA-directed RNA polymerase [Zostera marina]
          Length = 1841

 Score = 2838 bits (7358), Expect = 0.0
 Identities = 1412/1541 (91%), Positives = 1465/1541 (95%), Gaps = 1/1541 (0%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MDTRFPYSP+EV+KVQ VQFGI+ PDEIRQMSVV IEHGETMERGKPKP GLSDP LGTI
Sbjct: 1    MDTRFPYSPSEVSKVQMVQFGIIGPDEIRQMSVVLIEHGETMERGKPKPAGLSDPLLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRK+KCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDD R
Sbjct: 61   DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPK+RLKRIYDACKSKK CA           DSEEP+KKS+ GCGAQQPNIT
Sbjct: 121  FKQALKIRNPKHRLKRIYDACKSKKTCAVGDDIDVQDQGDSEEPVKKSRTGCGAQQPNIT 180

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            IDGMKMVAEYKA KKK+DDQ+QLPEPVERKQ+LSAE+VLSVLKRISD+DCLLLGL+PKYA
Sbjct: 181  IDGMKMVAEYKAQKKKNDDQDQLPEPVERKQVLSAEKVLSVLKRISDDDCLLLGLDPKYA 240

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421  REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVT+PYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 481  TFRLNLSVTAPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 540

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NLIR+SAWH+ESE+GFITPGDT VRIE+GE+LSGTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 601  NLIRYSAWHSESESGFITPGDTQVRIERGEILSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQ  FSIGIGDTIADA TMEKINETIS AKN VK+LIK AQEKQ
Sbjct: 661  ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAGTMEKINETISNAKNAVKDLIKQAQEKQ 720

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTM ESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721  LEAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIP+GF DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPYGFTDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K DSLKMKK EFN V+RYE+ DD+WNP YMQ EHVEDLK I EFRNVFDAEVQKLEADRY
Sbjct: 901  KLDSLKMKKAEFNNVYRYEIYDDNWNPGYMQSEHVEDLKNIPEFRNVFDAEVQKLEADRY 960

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLGTEI TTGD + PMPVNL+RL+WNAQ+TF +D RRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961  QLGTEITTTGDNSWPMPVNLRRLVWNAQKTFNVDFRRPSDMHPMEIVEAVDKLQERLKVV 1020

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDD +SMEAQKNATL FNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KPGVNK KE AKNVQCALEYTTLRSVT ATE+WYDPDP ST+IEEDVEFVKSYYEMPDE+
Sbjct: 1141 KPGVNKTKEKAKNVQCALEYTTLRSVTEATEVWYDPDPTSTLIEEDVEFVKSYYEMPDEE 1200

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            +APEKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
            MNDD PKGELQDE+AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKIN+FD+ EGFK
Sbjct: 1261 MNDDAPKGELQDEAAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDELEGFK 1320

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
            PDVEWMLDTEGVNLL+VMCH+DVDATRTTSNHLIEVIEV+GIEAVR++LLDELRVVISFD
Sbjct: 1321 PDVEWMLDTEGVNLLAVMCHDDVDATRTTSNHLIEVIEVIGIEAVRKSLLDELRVVISFD 1380

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1440

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            +LRGVTENIMLGQLAPIGTG+CALYLNDQMLQQAIELQLPSY           MTPS SP
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGSCALYLNDQMLQQAIELQLPSY----MEGLDFGMTPSHSP 1496

Query: 389  ISGTPYH-EGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            IS  P H +GMMSP+YLLSPNIR+SPITDAQFSPYVGGMAF
Sbjct: 1497 IS--PGHLDGMMSPNYLLSPNIRSSPITDAQFSPYVGGMAF 1535


>gb|OEL32462.1| DNA-directed RNA polymerase II subunit 1 [Dichanthelium oligosanthes]
          Length = 1901

 Score = 2836 bits (7352), Expect = 0.0
 Identities = 1407/1541 (91%), Positives = 1468/1541 (95%), Gaps = 1/1541 (0%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFPYSPAEVAKVQ VQFGILSPDEIRQMSV+QIEH ETMERGKPKPGGLSDPRLGTI
Sbjct: 1    MDARFPYSPAEVAKVQFVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRK+KCETCMA MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADEDD +
Sbjct: 61   DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQALK+RNPKNRLKRIYDACKSKK CA           D++E +KK +GGCGAQQPNIT
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEAVKK-RGGCGAQQPNIT 179

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            +DGM+MVAE+KAPKKK DDQ+QLPEPVERKQILSAERVL+VLKRISDEDCLLLGLNPK+A
Sbjct: 180  VDGMRMVAEFKAPKKKGDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 3990
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299

Query: 3989 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 3810
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359

Query: 3809 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 3630
            RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360  RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419

Query: 3629 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3450
            REDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420  REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479

Query: 3449 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 3270
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539

Query: 3269 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3090
            TLLGCRKITKRDT IEKDVFMN LMWW+DFDGKIPAPAILKPRP+WTGKQVFNLIIPKQI
Sbjct: 540  TLLGCRKITKRDTLIEKDVFMNTLMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQI 599

Query: 3089 NLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 2910
            NLIRFSAWH++SETGFITPGDT+VRIEKGELLSGTLCKK+LGT TGSLIHVIWEEVGPDA
Sbjct: 600  NLIRFSAWHSDSETGFITPGDTMVRIEKGELLSGTLCKKSLGTGTGSLIHVIWEEVGPDA 659

Query: 2909 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 2730
            ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKIN+TISKAKN+VKELIK +Q+KQ
Sbjct: 660  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINDTISKAKNEVKELIKKSQDKQ 719

Query: 2729 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2550
            LEAEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720  LEAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779

Query: 2549 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2370
            TACVGQQNVEGKRIPFGFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780  TACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGR 839

Query: 2369 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2190
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 840  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899

Query: 2189 KFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKLEADRY 2010
            K D+LKMKK EF+ VFRYELDD++W P+YM PEHV+DLKTIREFRNVF+AEVQKLEADR+
Sbjct: 900  KLDALKMKKAEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRF 959

Query: 2009 QLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1830
            QLG+EIATTG+   PMPVNLKRLIWNAQ+TFKID RRPSDMHPMEIVEAIDKLQERLKVV
Sbjct: 960  QLGSEIATTGENLWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVV 1019

Query: 1829 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1650
            PGDD +S+EAQKNATLLFNILLRSTFASKRVLKEYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDPMSIEAQKNATLLFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAP 1079

Query: 1649 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1470
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139

Query: 1469 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1290
            KP VN KKELAKNVQCALEYTTLRSVTHA+EIWYDPDP+ TIIEEDVEFV+SYYEMPDED
Sbjct: 1140 KPEVNSKKELAKNVQCALEYTTLRSVTHASEIWYDPDPLGTIIEEDVEFVRSYYEMPDED 1199

Query: 1289 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1110
            I P+KISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDL+CIFNDDNADKLILRIRI
Sbjct: 1200 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINREFDDDLSCIFNDDNADKLILRIRI 1259

Query: 1109 MNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQSEGFK 930
             NDD PKGE+QDESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK GK+N+FDQ EGFK
Sbjct: 1260 TNDDAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKEGKVNKFDQDEGFK 1319

Query: 929  PDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 750
               EWMLDTEGVNLL+VMCH+DVDATRTTSNHLIEVIE+LGIEAVRR+LLDELRVVISFD
Sbjct: 1320 ASNEWMLDTEGVNLLAVMCHDDVDATRTTSNHLIEVIEILGIEAVRRSLLDELRVVISFD 1379

Query: 749  GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 570
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESD 1439

Query: 569  HLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMTPSRSP 390
            HLRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIELQLPSY           MTP+RSP
Sbjct: 1440 HLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSY----VEGLDFGMTPARSP 1495

Query: 389  ISGTPYHEGMMSPSYLLSPNIRASPI-TDAQFSPYVGGMAF 270
            ISGTPYHEGMMSPSYLLSPNIRASPI TDA FSPYVG MAF
Sbjct: 1496 ISGTPYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1536


>gb|OVA15969.1| RNA polymerase II [Macleaya cordata]
          Length = 1853

 Score = 2831 bits (7340), Expect = 0.0
 Identities = 1404/1545 (90%), Positives = 1468/1545 (95%), Gaps = 5/1545 (0%)
 Frame = -1

Query: 4889 MDTRFPYSPAEVAKVQTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 4710
            MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSVVQIEH ET ERGKPKPGGLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 4709 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 4530
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+K VL+IMRCVCFNCSKILADE+D +
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 120

Query: 4529 FKQALKVRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXDSEEPIKKSKGGCGAQQPNIT 4350
            FKQ+ +++NPK+RLK++ DACK+K KC              EEP+KKS+GGCGAQQP +T
Sbjct: 121  FKQSQRIKNPKHRLKKVLDACKNKNKCEGGDEIDVQGQDL-EEPVKKSRGGCGAQQPKLT 179

Query: 4349 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 4170
            I+GMKM+AEYKA +KK+DDQEQLPEPVERKQ L+AERVLSVLKRISDEDC+LLGLNP +A
Sbjct: 180  IEGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLTAERVLSVLKRISDEDCMLLGLNPMFA 239

Query: 4169 RPDWMILQVLXXXXXXXXPSVMMDTSSRSE-----DDLTHQLAMIIRHNENLRRQERNGA 4005
            RPDWMILQVL        PSVMMDTS+RSE     DDLTHQLAMIIRHNENLRRQERNGA
Sbjct: 240  RPDWMILQVLPIPPPPVRPSVMMDTSARSEASFFYDDLTHQLAMIIRHNENLRRQERNGA 299

Query: 4004 PAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKR 3825
            PAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKR
Sbjct: 300  PAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKR 359

Query: 3824 VDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTG 3645
            VDFSARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTG
Sbjct: 360  VDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTG 419

Query: 3644 AKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIK 3465
            AKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIK
Sbjct: 420  AKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIK 479

Query: 3464 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVM 3285
            IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVM
Sbjct: 480  IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 539

Query: 3284 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLI 3105
            GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLI
Sbjct: 540  GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLI 599

Query: 3104 IPKQINLIRFSAWHAESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEE 2925
            IPKQINL+R SAWH+ESETGFITPGDT VRIE+GELL+GTLCKK LGTSTGSLIHVIWEE
Sbjct: 600  IPKQINLMRVSAWHSESETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEE 659

Query: 2924 VGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKELIKL 2745
            VGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKN+VKELI+ 
Sbjct: 660  VGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRA 719

Query: 2744 AQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFI 2565
            AQEKQLE EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFI
Sbjct: 720  AQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFI 779

Query: 2564 NISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFH 2385
            NISQMTACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFH
Sbjct: 780  NISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFH 839

Query: 2384 AMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAV 2205
            AMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAV
Sbjct: 840  AMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAV 899

Query: 2204 WIESQKFDSLKMKKGEFNTVFRYELDDDDWNPSYMQPEHVEDLKTIREFRNVFDAEVQKL 2025
            WIESQK DSLKMKK EF+ VFRYE+D+++WNPSYM PEHVEDLKTIREFRNVFDAEV+KL
Sbjct: 900  WIESQKLDSLKMKKSEFDKVFRYEIDNENWNPSYMLPEHVEDLKTIREFRNVFDAEVKKL 959

Query: 2024 EADRYQLGTEIATTGDTTLPMPVNLKRLIWNAQRTFKIDLRRPSDMHPMEIVEAIDKLQE 1845
            E DR+QLGTEI TTGD + PMPVNLKRLIWNAQ+TFK+DLRRPSDMHPMEIVEA+DKLQE
Sbjct: 960  EGDRFQLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQE 1019

Query: 1844 RLKVVPGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQ 1665
            RLKVVPGDD +SMEAQKNATL FNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQ
Sbjct: 1020 RLKVVPGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQ 1079

Query: 1664 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPS 1485
            SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPS
Sbjct: 1080 SLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPS 1139

Query: 1484 LSVYLKPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYE 1305
            LSVYLKP VNK KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDV+FVKSYYE
Sbjct: 1140 LSVYLKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYE 1199

Query: 1304 MPDEDIAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLI 1125
            MPDE++APEKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNA+KLI
Sbjct: 1200 MPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLI 1259

Query: 1124 LRIRIMNDDGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDQ 945
            LRIRIMND+ PKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGK+N+FD+
Sbjct: 1260 LRIRIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDE 1319

Query: 944  SEGFKPDVEWMLDTEGVNLLSVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRV 765
            ++GFKP+ EWMLDTEGVNLL+VMCHEDVDATRTTSNHLIEVIEVLGIEAVRR+LLDELRV
Sbjct: 1320 NDGFKPENEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRV 1379

Query: 764  VISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV 585
            VISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV
Sbjct: 1380 VISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV 1439

Query: 584  YAEADHLRGVTENIMLGQLAPIGTGACALYLNDQMLQQAIELQLPSYXXXXXXXXXXXMT 405
            YAE D+LRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIELQLPSY           MT
Sbjct: 1440 YAETDYLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSY----MEGLDFGMT 1495

Query: 404  PSRSPISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 270
            PSRSPI+GTPYHEGMMSPSYLLSPN+R+SPI+DAQFSPYVGGMAF
Sbjct: 1496 PSRSPITGTPYHEGMMSPSYLLSPNVRSSPISDAQFSPYVGGMAF 1540