BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00006806
         (1774 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|APB42235.1| ORF3 [Dioscorea bacilliform virus]                     331   1e-95
gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]                     328   1e-94
gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus]          324   3e-93
gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus]          324   3e-93
gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus]          323   1e-92
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]                   313   2e-89
gb|ASA40120.1| ORF3 [Dioscorea bacilliform virus]                     305   1e-86
ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus] >...   301   3e-85
gb|ASA40116.1| ORF3 [Dioscorea bacilliform RT virus 2]                300   7e-85
gb|ANV20896.1| ORF3 protein [Dioscorea bacilliform RT virus]          300   7e-85
gb|ATW01249.1| ORF3 protein [Dioscorea bacilliform RT virus]          298   3e-84
gb|ANV20902.1| ORF3 protein [Dioscorea bacilliform RT virus]          297   8e-84
gb|AIK01820.1| ORF3 [Piper yellow mottle virus]                       297   8e-84
gb|AHG32725.1| ORF3, partial [Dioscorea rotundata]                    294   1e-83
gb|ANV20899.1| ORF3 protein [Dioscorea bacilliform RT virus]          295   3e-83
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] >gi|5403574...   291   5e-82
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]               291   7e-82
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]               291   1e-81
gb|ACH86211.1| unknown [Citrus yellow mosaic virus]                   289   2e-81
gb|AIK01816.1| ORF3 [Piper yellow mottle virus]                       290   2e-81

>gb|APB42235.1| ORF3 [Dioscorea bacilliform virus]
          Length = 1897

 Score =  331 bits (849), Expect = 1e-95
 Identities = 196/483 (40%), Positives = 277/483 (57%), Gaps = 39/483 (8%)
 Frame = -1

Query: 1630 QGINSLI-KEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQQIIKC 1454
            QG+N  I +E +    ++  TY+LG  GGW+  VKV++++HDC+H+W Y         KC
Sbjct: 986  QGVNVFINRETLYYLREEDHTYFLGG-GGWRCSVKVSQQEHDCKHRWDYYTNTAD---KC 1041

Query: 1453 HTCRREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRA-QPFNPRSLIQEQQRYIG 1277
              C+RE M++W   C  C+I  CG C  +Y DLE+P  +    Q +NP+ L+ EQQ YI 
Sbjct: 1042 RFCKREVMKRWNARCQHCNILTCGMCSKHYVDLELPCQQEEIRQVYNPQQLMMEQQNYIQ 1101

Query: 1276 WCEGEIQRLKDELEYYKNKMEREIQAVRM-------EGDAELEENRLKVEQLELENHDRR 1118
             CE EIQRLKDEL   K   E  + A R+       E   +LEE +L+ ++L LEN D +
Sbjct: 1102 SCEMEIQRLKDELAREKKVAEEMVVAARISEAVSQQESKKQLEEMKLENDRLTLENEDLK 1161

Query: 1117 KQLQDEEQEVPEQSLQVLIDEGAIKEYSAVVSEKPKTCPNRLYNLMVEIIIPKVTPFKIN 938
            K+++  + ++ + ++ VLI +G  K  +A +  K +   N LYNL+VE+ IP  TP K+N
Sbjct: 1162 KEIRSLKIQIEDMAVNVLICDGKDKHVAATLPLKERR--NGLYNLIVELDIPGSTPLKVN 1219

Query: 937  AILGTGAATCCIDQNSAPKEAIEDNTFVINFSGINSQTTANKKLKGGLMKIGEHQFRIPY 758
            AIL TGA TCCI++   PKE +EDNTF + F+G NS  TA KKLK G M+IG+HQFRIPY
Sbjct: 1220 AILDTGATTCCINEEGLPKEILEDNTFEVKFTGANSVMTAIKKLKNGTMRIGDHQFRIPY 1279

Query: 757  TYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVTFYKQITTIQTKQEPIAATTXXXXX 578
            TY+FP+KL GG Q+ILG NFIR+M+GGVRI+G+EVTFYK +TTIQT+QE           
Sbjct: 1280 TYAFPLKLGGGEQLILGCNFIRSMNGGVRIEGNEVTFYKNVTTIQTQQEVPKVLALEELE 1339

Query: 577  XXXXEYYQLKEMGQDI------------------------LGTTQ*CIGRKNQVQCKIED 470
                EY  ++E    I                        +G         N+V CK+E 
Sbjct: 1340 MGEEEYIAIQESCSTICPVVNINFAQRFEDLILELKSAGYIGEEPMKFWSHNKVTCKLE- 1398

Query: 469  PWNPE-----DPAMKITTSDQEWLRSNRKPLPKSSTAFESSSKYASSKNMI-SGITLIGK 308
              NPE      P   +T S +E  R + + L K      S+S++ ++  ++ SG T+   
Sbjct: 1399 IINPELTIQDKPLKHVTPSMEEAFRKHVQALLKLKVIRPSTSRHRTTAFIVHSGTTV--- 1455

Query: 307  DPR 299
            DP+
Sbjct: 1456 DPK 1458


>gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]
          Length = 1946

 Score =  328 bits (842), Expect = 1e-94
 Identities = 188/503 (37%), Positives = 283/503 (56%), Gaps = 56/503 (11%)
 Frame = -1

Query: 1624 INSLIKEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQQIIKCHTC 1445
            + ++I+E I    Q+  TYW+GK+  W+  V+VTKE HDC H W+ + E+  Q  +C TC
Sbjct: 1026 LGAVIEEVICYLRQEDNTYWIGKDDNWRAQVRVTKEVHDCNHTWEMHPEMIGQTPRCLTC 1085

Query: 1444 RREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQPFNPRSLIQEQQRYIGWCEG 1265
            +RE  + WR +C +C   +CG CGPNYF++++PV +V    ++P+ L+++QQ YI W + 
Sbjct: 1086 KRETQQSWRAHCSKCQTTSCGMCGPNYFNIKIPVRRVEPVRYDPKPLLEQQQVYIKWADA 1145

Query: 1264 EIQRLKDELEYYKNKME----------------------REIQAVRMEGDAELEENRLKV 1151
            EI+RLK EL+  + K                        +EI+A+++E D E EE R + 
Sbjct: 1146 EIERLKGELKAVQEKAALEAQNMQENVQREIEAQSKIHMQEIEAIKLEVDTENEELRFEN 1205

Query: 1150 EQLELENHDRRKQL------QDEEQEVPEQSLQVLIDEGAIKEYSAVVSEKPKTCPNRLY 989
            ++L+LE HD +K L      +  E E  E +   L +E   K +SA  + +P+   N+LY
Sbjct: 1206 DRLKLEVHDLKKLLDAIKGKEPLEDEDGEGTSAFLREEEHEKIFSAEAAVQPRRNGNKLY 1265

Query: 988  NLMVEIIIPKVTPFKINAILGTGAATCCIDQNSAPKEAIEDNTFVINFSGINSQTTANKK 809
            NL VE  IP + PF++ AIL TGA TCC D+ + P +A+E++ + + F+G+NS + +NKK
Sbjct: 1266 NLNVEFNIPNIPPFRVRAILDTGATTCCADEKAIPNDALEESPYRVRFTGVNSTSHSNKK 1325

Query: 808  LKGGLMKIGEHQFRIPYTYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVTFYKQITT 629
            +K G+MKIGEH FRIP+TY FP+KL+  IQMI+G NFIRAM+GG+RI+G+EVTFYK +TT
Sbjct: 1326 MKAGVMKIGEHFFRIPFTYIFPLKLD-DIQMIIGCNFIRAMAGGIRIEGNEVTFYKNVTT 1384

Query: 628  IQTKQEPIAATTXXXXXXXXXEYYQL-----------KEMGQDILGT-----TQ*CIGR- 500
            I+T     AA +         E+  L           KE  Q I  T      Q  IG  
Sbjct: 1385 IKTLPYASAAASIEELDLEEEEFISLTQAAEPTVTNNKEFCQRIEPTIKALKEQGFIGEE 1444

Query: 499  ------KNQVQCKIEDPWNP-----EDPAMKITTSDQEWLRSNRKPLPKSSTAFESSSKY 353
                  KN+V CK+ D  NP     + P   +T   QE  + + + L K      S S++
Sbjct: 1445 PMKHWVKNKVTCKL-DIINPDLTIEDRPLKHVTPQMQEAFKKHVQALLKLKVIRPSQSRH 1503

Query: 352  ASSKNMISGITLIGKDPRKTIIG 284
             ++  ++   T +     K + G
Sbjct: 1504 RTTAIIVYSGTTVDPKTGKEVKG 1526


>gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1919

 Score =  324 bits (831), Expect = 3e-93
 Identities = 196/485 (40%), Positives = 279/485 (57%), Gaps = 41/485 (8%)
 Frame = -1

Query: 1630 QGINSLI-KEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQQIIKC 1454
            QG+N  I KE +    Q+   Y+LG  GGW+  V+VT+++HDC+H+W+Y       +  C
Sbjct: 991  QGVNVFIQKETLYYLRQEDNAYFLGG-GGWRCAVRVTQQEHDCRHQWEY---YSPTVANC 1046

Query: 1453 HTCRREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRA-QPFNPRSLIQEQQRYIG 1277
              C+RE M++W   C +C I  CG C  +Y  L +P  +    Q +NPR L+ EQQ YI 
Sbjct: 1047 RFCKREVMQRWNAKCSKCSILTCGMCSEHYLGLNIPCQREEIRQVYNPRQLMMEQQSYIQ 1106

Query: 1276 WCEGEIQRLKDELEYYKNKMEREIQAVRM-------EGDAELEENRLKVEQLELENHDRR 1118
             CE EIQRLK+E++  K   E ++ A ++       E   +++E +L+ ++L LENHD +
Sbjct: 1107 SCELEIQRLKEEIQNVKKVAEEQVVAAKINEAVAVKEMQEQIQELKLENDRLTLENHDLK 1166

Query: 1117 KQLQDEEQEVPEQSLQVLIDEGAIKEYSAVVSEKPKTCPNRLYNLMVEIIIPKVTPFKIN 938
            + L+++E   PEQ L+VLI EG  ++Y A  S K +   N LYNLMVEI IP   P  +N
Sbjct: 1167 ELLKNKE---PEQ-LEVLICEGKERQYIAAASLKERR--NGLYNLMVEIDIPGSLPIMVN 1220

Query: 937  AILGTGAATCCIDQNSAPKEAIEDNTFVINFSGINSQTTANKKLKGGLMKIGEHQFRIPY 758
            AIL TGA TCCI++   PKE +EDNT+ + F G NS+ TA KKLK G MKIG+H FRIPY
Sbjct: 1221 AILDTGATTCCINEKGLPKEILEDNTYEVKFVGANSEMTATKKLKAGNMKIGDHTFRIPY 1280

Query: 757  TYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVTFYKQITTIQTKQEPIAATTXXXXX 578
            T++FP++L GG Q+ILG NFIR+MSGGVRI+G  VTFYK +TTI+T+QE     +     
Sbjct: 1281 TFAFPLELGGGEQLILGCNFIRSMSGGVRIEGDNVTFYKNVTTIKTQQEVSKVLSLEELE 1340

Query: 577  XXXXEY--------------------------YQLKEMGQDILGTTQ*CIGRKNQVQCKI 476
                EY                           +LKE G   +G       ++N+V CK+
Sbjct: 1341 MNEDEYISIQQSVSAISPGIHSSFTTRFGDLIQKLKEAG--YVGEEPMKFWQQNKVTCKL 1398

Query: 475  EDPWNPE-----DPAMKITTSDQEWLRSNRKPLPKSSTAFESSSKYASSKNMI-SGITLI 314
             D  NPE      P   +T + +E  R + + L K      S+SK+ ++  ++ SG T+ 
Sbjct: 1399 -DIINPELRIQDKPLKHVTPAMEETFRKHVQALLKLKVIRPSTSKHRTTAFIVHSGTTI- 1456

Query: 313  GKDPR 299
              DP+
Sbjct: 1457 --DPK 1459


>gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1921

 Score =  324 bits (831), Expect = 3e-93
 Identities = 196/485 (40%), Positives = 279/485 (57%), Gaps = 41/485 (8%)
 Frame = -1

Query: 1630 QGINSLI-KEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQQIIKC 1454
            QG+N  I KE +    Q+   Y+LG  GGW+  V+VT+++HDC+H+W+Y       +  C
Sbjct: 993  QGVNVFIQKETLYYLRQEDNAYFLGG-GGWRCAVRVTQQEHDCRHQWEY---YSPTVANC 1048

Query: 1453 HTCRREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRA-QPFNPRSLIQEQQRYIG 1277
              C+RE M++W   C +C I  CG C  +Y  L +P  +    Q +NPR L+ EQQ YI 
Sbjct: 1049 RFCKREVMQRWNAKCSKCSILTCGMCSEHYLGLNIPCQREEIRQVYNPRQLMMEQQSYIQ 1108

Query: 1276 WCEGEIQRLKDELEYYKNKMEREIQAVRM-------EGDAELEENRLKVEQLELENHDRR 1118
             CE EIQRLK+E++  K   E ++ A ++       E   +++E +L+ ++L LENHD +
Sbjct: 1109 SCELEIQRLKEEIQNVKKVAEEQVVAAKINEAVAVKEMQEQIQELKLENDRLTLENHDLK 1168

Query: 1117 KQLQDEEQEVPEQSLQVLIDEGAIKEYSAVVSEKPKTCPNRLYNLMVEIIIPKVTPFKIN 938
            + L+++E   PEQ L+VLI EG  ++Y A  S K +   N LYNLMVEI IP   P  +N
Sbjct: 1169 ELLKNKE---PEQ-LEVLICEGKERQYIAAASLKERR--NGLYNLMVEIDIPGSLPIMVN 1222

Query: 937  AILGTGAATCCIDQNSAPKEAIEDNTFVINFSGINSQTTANKKLKGGLMKIGEHQFRIPY 758
            AIL TGA TCCI++   PKE +EDNT+ + F G NS+ TA KKLK G MKIG+H FRIPY
Sbjct: 1223 AILDTGATTCCINEKGLPKEILEDNTYEVKFVGANSEMTATKKLKAGNMKIGDHTFRIPY 1282

Query: 757  TYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVTFYKQITTIQTKQEPIAATTXXXXX 578
            T++FP++L GG Q+ILG NFIR+MSGGVRI+G  VTFYK +TTI+T+QE     +     
Sbjct: 1283 TFAFPLELGGGEQLILGCNFIRSMSGGVRIEGDNVTFYKNVTTIKTQQEVSKVLSLEELE 1342

Query: 577  XXXXEY--------------------------YQLKEMGQDILGTTQ*CIGRKNQVQCKI 476
                EY                           +LKE G   +G       ++N+V CK+
Sbjct: 1343 MNEDEYISIQQSVSAISPGIHSSFTTRFGDLIQKLKEAG--YVGEEPMKFWQQNKVTCKL 1400

Query: 475  EDPWNPE-----DPAMKITTSDQEWLRSNRKPLPKSSTAFESSSKYASSKNMI-SGITLI 314
             D  NPE      P   +T + +E  R + + L K      S+SK+ ++  ++ SG T+ 
Sbjct: 1401 -DIINPELRIQDKPLKHVTPAMEETFRKHVQALLKLKVIRPSTSKHRTTAFIVHSGTTI- 1458

Query: 313  GKDPR 299
              DP+
Sbjct: 1459 --DPK 1461


>gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1921

 Score =  323 bits (827), Expect = 1e-92
 Identities = 195/485 (40%), Positives = 279/485 (57%), Gaps = 41/485 (8%)
 Frame = -1

Query: 1630 QGINSLI-KEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQQIIKC 1454
            QG+N  I KE +    Q+   Y+LG  GGW+  V+VT+++HDC+H+W+Y       +  C
Sbjct: 993  QGVNVFIQKETLYYLRQEDNAYFLGG-GGWRCAVRVTQQEHDCRHQWEY---YSPTVANC 1048

Query: 1453 HTCRREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRA-QPFNPRSLIQEQQRYIG 1277
              C+RE M++W   C +C I  CG C  +Y  L +P  +    Q +NPR L+ EQQ YI 
Sbjct: 1049 RFCKREVMQRWNAKCSKCSILTCGMCSEHYLGLNIPCQREEIRQVYNPRQLMMEQQSYIQ 1108

Query: 1276 WCEGEIQRLKDELEYYKNKMEREIQAVRM-------EGDAELEENRLKVEQLELENHDRR 1118
             CE EIQRLK+E++  K   E ++ A ++       E   +++E +L+ ++L LENHD +
Sbjct: 1109 SCELEIQRLKEEIQNVKKVAEEQVVAAKINEAVAVKEMQEQIQELKLENDRLTLENHDLK 1168

Query: 1117 KQLQDEEQEVPEQSLQVLIDEGAIKEYSAVVSEKPKTCPNRLYNLMVEIIIPKVTPFKIN 938
            + L+++E   PEQ L+VLI EG  ++Y A  S K +   N LYNL+VEI IP   P  +N
Sbjct: 1169 ELLKNKE---PEQ-LEVLICEGKERQYIAAASLKERR--NGLYNLIVEIDIPGSLPIMVN 1222

Query: 937  AILGTGAATCCIDQNSAPKEAIEDNTFVINFSGINSQTTANKKLKGGLMKIGEHQFRIPY 758
            AIL TGA TCCI++   PKE +EDNT+ + F G NS+ TA KKLK G MKIG+H FRIPY
Sbjct: 1223 AILDTGATTCCINEKGLPKEILEDNTYEVKFVGANSEMTATKKLKAGNMKIGDHTFRIPY 1282

Query: 757  TYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVTFYKQITTIQTKQEPIAATTXXXXX 578
            T++FP++L GG Q+ILG NFIR+MSGGVRI+G  VTFYK +TTI+T+QE     +     
Sbjct: 1283 TFAFPLELGGGEQLILGCNFIRSMSGGVRIEGDNVTFYKNVTTIKTQQEVSKVLSLEELE 1342

Query: 577  XXXXEY--------------------------YQLKEMGQDILGTTQ*CIGRKNQVQCKI 476
                EY                           +LKE G   +G       ++N+V CK+
Sbjct: 1343 MNEDEYISIQQSVSAISPGIHSSFTTRFGDLIQKLKEAG--YVGEEPMKFWQQNKVTCKL 1400

Query: 475  EDPWNPE-----DPAMKITTSDQEWLRSNRKPLPKSSTAFESSSKYASSKNMI-SGITLI 314
             D  NPE      P   +T + +E  R + + L K      S+SK+ ++  ++ SG T+ 
Sbjct: 1401 -DIINPELRIQDKPLKHVTPAMEETFRKHVQALLKLKVIRPSTSKHRTTAFIVHSGTTI- 1458

Query: 313  GKDPR 299
              DP+
Sbjct: 1459 --DPK 1461


>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
          Length = 1846

 Score =  313 bits (803), Expect = 2e-89
 Identities = 183/461 (39%), Positives = 258/461 (55%), Gaps = 37/461 (8%)
 Frame = -1

Query: 1570 YWLGKE-GGWQPLVKVTKEQHDCQHKWQYNEEIEQQI-IKCHTCRREAMRKWRIYCPQCD 1397
            + LG+E GGW+P +KV+ EQ  CQHKW++N EI+Q + +KC  C+   M++ RI+CP+C 
Sbjct: 873  FMLGEEDGGWRPKIKVSDEQLACQHKWEHNGEIQQFVYLKCLGCQCPTMKRARIHCPKCK 932

Query: 1396 IAACGQCGPNYFDLEVPVAKVRAQPFNPRSLIQEQQRYIGWCEGEIQRLKDELEYYKNKM 1217
              AC  CGP YF  EVPVA     P NPR LI EQQ +I WCE EI+RL+ E+ Y+K   
Sbjct: 933  ATACNLCGPYYFKKEVPVAPPPPTPMNPRKLIMEQQNHIQWCEVEIERLEKEVSYWKKLY 992

Query: 1216 EREIQAVRMEGDAELEENRLKVEQLELENHDRRKQLQDEEQEVPEQSLQVLIDEGAIKEY 1037
            E  ++A  +     +E+ +   ++L  E+ ++RK+       + E      + E  + + 
Sbjct: 993  ENALRATGV-----IEDLQKDYKELLSEDEEKRKRRAKGVMIIEEGEQANFLQEEKVNKV 1047

Query: 1036 SAVVSEKPKTCP-NRLYNLMVEIIIPKVTPFKINAILGTGAATCCIDQNSAPKEAIEDNT 860
            +    ++PK    N LYN ++ I IP +  F + AIL TGA TCCIDQ S PKEA+E+NT
Sbjct: 1048 AVQEEQRPKKMVRNMLYNFIISIDIPGIDKFSVKAILDTGATTCCIDQESIPKEALEENT 1107

Query: 859  FVINFSGINSQTTANKKLKGGLMKIGEHQFRIPYTYSFPMKLEGGIQMILGSNFIRAMSG 680
            +++ FSG+NS  TANKKLKGG M IGE+ FRIPYTYSFP+K+E G+QMI+G NFIRAM G
Sbjct: 1108 YLVRFSGVNSTMTANKKLKGGRMFIGENMFRIPYTYSFPIKMEDGVQMIVGCNFIRAMYG 1167

Query: 679  GVRIQGSEVTFYKQITTIQTKQEP-------------------------IAATTXXXXXX 575
            GVRI+G+ VTFYK +T I T Q                           I  +       
Sbjct: 1168 GVRIEGNVVTFYKNLTVINTSQSTEIARMLQEDVDDEELWQIQEAVYINIGKSRESFLKR 1227

Query: 574  XXXEYYQLKEMGQDILGTTQ*CIGRKNQVQCKIEDPWNP-----EDPAMKITTSDQEWLR 410
                  QLKE G   +G        KN+V C++ D  NP     + P   +T S +E  R
Sbjct: 1228 FEALINQLKEAG--YIGENPLQHWEKNRVVCQL-DIKNPDFIIEDKPLKHLTPSMKESFR 1284

Query: 409  SNRKPLPKSSTAFESSSKYASSKNMISGITLI----GKDPR 299
             + + L K      S S++ ++  ++   T +    GK+ R
Sbjct: 1285 RHTEALLKLGVIRPSKSRHRTTAMIVQSGTAVDPVTGKETR 1325


>gb|ASA40120.1| ORF3 [Dioscorea bacilliform virus]
          Length = 2005

 Score =  305 bits (782), Expect = 1e-86
 Identities = 159/370 (42%), Positives = 222/370 (60%), Gaps = 36/370 (9%)
 Frame = -1

Query: 1621 NSLIKEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQQIIKCHTCR 1442
            + + +E  + + ++  TYW+GK+  W+  VKV+K  HDC H W+ +  +  Q+ +C  C+
Sbjct: 1083 SKVAEEEAIFYLREDGTYWIGKDDNWRVQVKVSKTVHDCPHSWELHPPMLGQVPRCLCCK 1142

Query: 1441 REAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQPFNPRSLIQEQQRYIGWCEGE 1262
            R+    WR YC +C    CG CGPNYF+L VPV K     F+ + ++++QQ YI W E E
Sbjct: 1143 RDTQENWRAYCSRCQTVTCGMCGPNYFNLTVPVKKATPAFFDHKPMLEQQQLYIKWAESE 1202

Query: 1261 IQRLKDELEYYKNKME-----------REIQAVRMEGDAELEENR-------LKVEQLEL 1136
            I RLK ELE  K   E           R+  A+R+E D E EE R       LK + LEL
Sbjct: 1203 IARLKGELEILKTTSEAKLKASEEEASRQKDAMRLEVDTENEELRHRVALLELKNDALEL 1262

Query: 1135 ENHDRRKQL------------------QDEEQEVPEQSLQVLIDEGAIKEYSAVVSEKPK 1010
            ENHD + ++                  ++EE    E+++  LI+E   K  SA  + +P+
Sbjct: 1263 ENHDHKVRIGELELQIEGHELAEKMAAEEEEANAAEETVAYLIEEENEKICSAETAIRPR 1322

Query: 1009 TCPNRLYNLMVEIIIPKVTPFKINAILGTGAATCCIDQNSAPKEAIEDNTFVINFSGINS 830
               N+LYNL  EIIIP V PFK+ AIL TGA TCC+D  + PKEA+E++ F   F+ IN+
Sbjct: 1323 RGGNKLYNLTAEIIIPGVPPFKLRAILDTGATTCCVDIKAVPKEALEESAFQARFNSINA 1382

Query: 829  QTTANKKLKGGLMKIGEHQFRIPYTYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVT 650
             + AN KLK G MKI  + FRIPY Y+F +KL+  +QMILG NFIR+M GGVRI+G++VT
Sbjct: 1383 TSVANLKLKPGTMKIEGNTFRIPYAYTFTLKLD-DVQMILGCNFIRSMGGGVRIEGNDVT 1441

Query: 649  FYKQITTIQT 620
            FYK +TTI+T
Sbjct: 1442 FYKNVTTIKT 1451


>ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus]
 gb|ABI47983.1| ORF3 protein [Dioscorea bacilliform SN virus]
          Length = 1887

 Score =  301 bits (771), Expect = 3e-85
 Identities = 181/485 (37%), Positives = 266/485 (54%), Gaps = 38/485 (7%)
 Frame = -1

Query: 1657 AAKESFQQFQGINSLIKEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEE 1478
            +  E  +  Q +N  I++ +L   ++   ++LG  GGW+  V+VT ++HDC H+W+Y   
Sbjct: 979  SVSEGEEVLQSLNPFIQQNLLYIREEDGKHFLGG-GGWRAAVQVTPQEHDCHHQWEY--- 1034

Query: 1477 IEQQIIK---CHTCRREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQPFNPRS 1307
                I+    C  C+R+  ++W   C  C++  CG C  +Y DLE+P  +   Q +NP+ 
Sbjct: 1035 ---YILNTGLCKFCKRDITQRWHAKCMHCNLVTCGFCSQHYLDLEIPCQREEVQVYNPQR 1091

Query: 1306 LIQEQQRYIGWCEGEIQRLKDELEYYKNKMEREIQAVRMEGDAELEENR-------LKVE 1148
            L+QEQQ YI  CE EI++LK+ ++      E +I A  +    ELEE R       L  E
Sbjct: 1092 LLQEQQNYIQVCEVEIEKLKESVKAANKIAEDKIMAASIRHAVELEELRKQLQAIKLDKE 1151

Query: 1147 QLELENHDRRKQLQDEEQEVPEQSLQVLIDEGAIK-EYSAVVSEKPKTCPNRLYNLMVEI 971
            +LELEN D +K L++ EQ      + VLI +G  K E  A + E+     N LYNLMV++
Sbjct: 1152 RLELENPDLKKILEEFEQ------VNVLICDGREKSERIASIKERR----NGLYNLMVQL 1201

Query: 970  IIPKVTPFKINAILGTGAATCCIDQNSAPKEAIEDNTFVINFSGINSQTTANKKLKGGLM 791
             IP   P ++NAIL TGA TCCI++   PK  +E NTF + F+G NS+  A KKLKGG+M
Sbjct: 1202 EIPGAAPIQVNAILDTGATTCCINEEGLPKAILEANTFEVKFTGANSEMVARKKLKGGIM 1261

Query: 790  KIGEHQFRIPYTYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVTFYKQITTIQTKQE 611
            KIG++QFRIPYT++FP+KL GG Q+I+G NFIRAM+GGVRI+G  VTFYK +TTIQT+Q+
Sbjct: 1262 KIGDNQFRIPYTFAFPLKLGGGEQLIIGCNFIRAMNGGVRIEGDTVTFYKNVTTIQTQQQ 1321

Query: 610  PIAATTXXXXXXXXXEYYQLKEMGQDI----------------------LGTTQ*CIGRK 497
                           EY +L++    I                      +G        K
Sbjct: 1322 VPKLLALEELEMDEDEYIELQQSISSIEPNNYFSNKLSQVFQELKAAGYIGDDPLKFWSK 1381

Query: 496  NQVQCKIE----DPWNPEDPAMKITTSDQEWLRSNRKPLPKSSTAFESSSKYASSKNMI- 332
            NQV C++     D    + P   +T + +E  R +   L K      S S++ ++  ++ 
Sbjct: 1382 NQVVCELNIINPDLTIQDKPLKHVTPAMEETFRKHIDALLKLKVIRASKSRHRTTAFIVY 1441

Query: 331  SGITL 317
            SG T+
Sbjct: 1442 SGTTV 1446


>gb|ASA40116.1| ORF3 [Dioscorea bacilliform RT virus 2]
          Length = 1892

 Score =  300 bits (768), Expect = 7e-85
 Identities = 162/373 (43%), Positives = 223/373 (59%), Gaps = 28/373 (7%)
 Frame = -1

Query: 1648 ESFQQFQGINSLIKEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQ 1469
            E   +   +NS+    +     +  TYWLG  GGW+  VKVT ++H+C H W Y EE   
Sbjct: 940  EDNNEVHNLNSITHSSLFYLRAEDNTYWLGG-GGWRFAVKVTPQEHNCAHSWSYYEE--- 995

Query: 1468 QIIKCHTCRREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQP-FNPRSLIQEQ 1292
            Q   C  C+RE M+++  +C +C I  CG C  +Y   ++P  +   +P + PR L+ EQ
Sbjct: 996  QSRTCRFCKREVMKRFNAHCSKCSITTCGMCSNHYLGFQIPCQQEEVRPVYEPRQLMNEQ 1055

Query: 1291 QRYIGWCEGEIQRLKDELEYYKNKMEREIQAVRM----EGDAELEEN---RLKVEQLELE 1133
              YI  CE EI RLK E+   K   E EI ++++    E D   +EN   RL+ E+L+LE
Sbjct: 1056 MTYIKHCEEEIARLKQEVAAAKILSENEIVSMKIREAVETDTLRKENETLRLENERLQLE 1115

Query: 1132 NHDRRK--------------------QLQDEEQEVPEQSLQVLIDEGAIKEYSAVVSEKP 1013
              D  K                    Q+Q  ++ + E+ L V+I EG  ++  A  S + 
Sbjct: 1116 VADLNKIIKGKQPIIPEDEELEELKQQVQQLKKSLEEKRLGVIICEGKGEQVLATTSSR- 1174

Query: 1012 KTCPNRLYNLMVEIIIPKVTPFKINAILGTGAATCCIDQNSAPKEAIEDNTFVINFSGIN 833
                N LYNL+VE+ IP + PF +NAIL TGA  CCI++   PK A+EDNTF + F+G N
Sbjct: 1175 ----NGLYNLVVELSIPGILPFSVNAILDTGATNCCINEEGLPKGALEDNTFEVTFTGAN 1230

Query: 832  SQTTANKKLKGGLMKIGEHQFRIPYTYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEV 653
            S   ANKKLKGG+MKIG+HQFRIPYT++FP++L GG Q+ILG NFIRAM GG+RI+G EV
Sbjct: 1231 SVMKANKKLKGGMMKIGDHQFRIPYTFAFPLRLGGGEQLILGCNFIRAMQGGLRIEGDEV 1290

Query: 652  TFYKQITTIQTKQ 614
            TFYK +TTI+T+Q
Sbjct: 1291 TFYKNVTTIKTQQ 1303


>gb|ANV20896.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1893

 Score =  300 bits (768), Expect = 7e-85
 Identities = 162/373 (43%), Positives = 223/373 (59%), Gaps = 28/373 (7%)
 Frame = -1

Query: 1648 ESFQQFQGINSLIKEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQ 1469
            E   +   +NS+    +     +  TYWLG  GGW+  VKVT ++H+C H W Y EE   
Sbjct: 941  EDDNEVHNLNSITHSSLFYLRAEDNTYWLGG-GGWRFAVKVTPQEHNCAHSWSYYEE--- 996

Query: 1468 QIIKCHTCRREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQP-FNPRSLIQEQ 1292
            Q   C  C+RE M+++  +C +C I  CG C  +Y   ++P  +   +P + PR L+ EQ
Sbjct: 997  QSRTCRFCKREVMKRFNAHCSKCSITTCGMCSNHYLGFQIPCQQEEVRPVYEPRQLMNEQ 1056

Query: 1291 QRYIGWCEGEIQRLKDELEYYKNKMEREIQAVRM----EGDAELEEN---RLKVEQLELE 1133
              YI  CE EI RLK E+   K   E EI ++++    E D   +EN   RL+ E+L+LE
Sbjct: 1057 MTYIKHCEEEIARLKQEVAAAKILSENEIVSMKIREAVETDTLRKENETLRLENERLQLE 1116

Query: 1132 NHDRRK--------------------QLQDEEQEVPEQSLQVLIDEGAIKEYSAVVSEKP 1013
              D  K                    Q+Q  ++ + E+ L V+I EG  ++  A  S + 
Sbjct: 1117 VADLNKIIKGKQPIIPEDEELEELKQQVQQLKKSLEEKRLGVIICEGKGEQVLATTSSR- 1175

Query: 1012 KTCPNRLYNLMVEIIIPKVTPFKINAILGTGAATCCIDQNSAPKEAIEDNTFVINFSGIN 833
                N LYNL+VE+ IP + PF +NAIL TGA  CCI++   PK A+EDNTF + F+G N
Sbjct: 1176 ----NGLYNLVVELSIPGILPFSVNAILDTGATNCCINEEGLPKGALEDNTFEVTFTGAN 1231

Query: 832  SQTTANKKLKGGLMKIGEHQFRIPYTYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEV 653
            S   ANKKLKGG+MKIG+HQFRIPYT++FP++L GG Q+ILG NFIRAM GG+RI+G EV
Sbjct: 1232 SVMKANKKLKGGMMKIGDHQFRIPYTFAFPLRLGGGEQLILGCNFIRAMQGGLRIEGDEV 1291

Query: 652  TFYKQITTIQTKQ 614
            TFYK +TTI+T+Q
Sbjct: 1292 TFYKNVTTIKTQQ 1304


>gb|ATW01249.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1904

 Score =  298 bits (763), Expect = 3e-84
 Identities = 172/478 (35%), Positives = 262/478 (54%), Gaps = 34/478 (7%)
 Frame = -1

Query: 1648 ESFQQFQGINSLIKEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQ 1469
            E  +  Q +N +++ ++L   Q+   Y+LG  GGW+  V+VT+++HDC+H+W+Y      
Sbjct: 996  EGGEGLQSLNPILQHHLLYLRQEDGKYFLGG-GGWRAAVQVTQQEHDCRHQWEY---YLL 1051

Query: 1468 QIIKCHTCRREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQPFNPRSLIQEQQ 1289
                C  CR+E  ++W   C  C I  CG C  +Y  LE+P  K   Q +NP  L+ EQQ
Sbjct: 1052 NTGSCRFCRKEITKRWHAKCMHCSIVTCGFCSQHYVQLEIPCQKEEVQIYNPHRLLYEQQ 1111

Query: 1288 RYIGWCEGEIQRLKDELEYYKNKMEREIQAVRMEGDAELEENR-------LKVEQLELEN 1130
             YI +CE E+++LK+  +  +   E +I A  +    E+EE R       L+ ++LELEN
Sbjct: 1112 EYIKFCEVEMEKLKNAAKAAEKIAEDKILAASIRNAVEIEELRKELATVKLEKDRLELEN 1171

Query: 1129 HDRRKQLQDEEQEVPEQSLQVLIDEGAIKEYSAVVSEKPKTCPNRLYNLMVEIIIPKVTP 950
             D ++ L++ EQ      + VLI +G  K  +A ++ K K   N LYNL V++ IP   P
Sbjct: 1172 KDLKRILEESEQ------VNVLICDGREKLVTASLASKEKR--NGLYNLTVQLEIPGSAP 1223

Query: 949  FKINAILGTGAATCCIDQNSAPKEAIEDNTFVINFSGINSQTTANKKLKGGLMKIGEHQF 770
              +NAIL TGA  CCI++   PKE +E+NTF +  +G NS+  A KKLK G+M+IG++QF
Sbjct: 1224 ISVNAILDTGATNCCINEEGLPKEILEENTFEVKLTGANSEMVARKKLKNGIMRIGDNQF 1283

Query: 769  RIPYTYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVTFYKQITTIQTKQEPIAATTX 590
            RIPYT++FP++L GG Q+I+G NFIRAM+GGVRI+G  VTFYK +TT++T+Q+       
Sbjct: 1284 RIPYTFAFPLRLGGGEQLIIGCNFIRAMNGGVRIEGDTVTFYKNVTTVKTQQQVPKLLAL 1343

Query: 589  XXXXXXXXEYYQLKEMGQDI----------------------LGTTQ*CIGRKNQVQCKI 476
                    EY +L++    I                      +G        KNQV C++
Sbjct: 1344 EELEMNEDEYIELQQSVSAIEPSNYFSNKLSQVLQELKQAGYIGDDPLKFWSKNQVTCEL 1403

Query: 475  E----DPWNPEDPAMKITTSDQEWLRSNRKPLPKSSTAFESSSKYASSKNMI-SGITL 317
                 D    + P   +T +  E  R +   L K     ES S++ ++  ++ SG T+
Sbjct: 1404 NIINPDLTIQDKPLKHVTPAMSETFRKHIDALLKLKVIRESKSRHRTTAFIVYSGTTV 1461


>gb|ANV20902.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1893

 Score =  297 bits (760), Expect = 8e-84
 Identities = 161/373 (43%), Positives = 222/373 (59%), Gaps = 28/373 (7%)
 Frame = -1

Query: 1648 ESFQQFQGINSLIKEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQ 1469
            E   +   +NS+    +     +  TYWLG  GGW+  VKVT ++H+C H W Y EE   
Sbjct: 941  EDDNEVHNLNSITHSSLFYLRAEDNTYWLGG-GGWRFAVKVTPQEHNCAHSWSYYEE--- 996

Query: 1468 QIIKCHTCRREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQP-FNPRSLIQEQ 1292
            Q   C  C+RE M+++  +C +C I  CG C  +Y   ++P  +   +P + PR L+ EQ
Sbjct: 997  QSRTCRFCKREVMKRFNAHCSKCSITTCGMCSNHYLGFQIPCQQEEVRPVYEPRQLMNEQ 1056

Query: 1291 QRYIGWCEGEIQRLKDELEYYKNKMEREIQAVRM----EGDAELEEN---RLKVEQLELE 1133
              YI  CE EI RLK E+   K   E EI ++++    E D   +EN   RL+ E+L+LE
Sbjct: 1057 MTYIKHCEEEIARLKQEVAAAKILSENEIVSMKIREAVETDTLRKENETLRLENERLQLE 1116

Query: 1132 NHDRRK--------------------QLQDEEQEVPEQSLQVLIDEGAIKEYSAVVSEKP 1013
              D  K                    Q+Q  ++ + E+ L V+I EG  ++  A  S + 
Sbjct: 1117 VADLNKIIKGKQPIIPEDEELEELKQQVQQLKKSLEEKRLGVIICEGKGEQVLATTSSR- 1175

Query: 1012 KTCPNRLYNLMVEIIIPKVTPFKINAILGTGAATCCIDQNSAPKEAIEDNTFVINFSGIN 833
                N LYNL+VE+ IP + PF +NAIL TGA  CCI++   PK A+EDNTF + F+G N
Sbjct: 1176 ----NGLYNLVVELSIPGILPFSVNAILDTGATNCCINEEGLPKGALEDNTFEVTFTGAN 1231

Query: 832  SQTTANKKLKGGLMKIGEHQFRIPYTYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEV 653
            S   ANKKLKGG+MKIG+HQFRIPYT++FP++L GG Q+ILG NFIRAM G +RI+G EV
Sbjct: 1232 SVMKANKKLKGGMMKIGDHQFRIPYTFAFPLRLGGGEQLILGCNFIRAMQGRLRIEGDEV 1291

Query: 652  TFYKQITTIQTKQ 614
            TFYK +TTI+T+Q
Sbjct: 1292 TFYKNVTTIKTQQ 1304


>gb|AIK01820.1| ORF3 [Piper yellow mottle virus]
          Length = 1925

 Score =  297 bits (760), Expect = 8e-84
 Identities = 165/434 (38%), Positives = 240/434 (55%), Gaps = 49/434 (11%)
 Frame = -1

Query: 1627 GINSLIKEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQQ-IIKCH 1451
            G  + +  YI VF ++  TYW+GK G WQP++KVT++ HDCQH W  N ++     I+C 
Sbjct: 954  GSIATVTHYINVFFEEDRTYWVGKAGSWQPMIKVTQKVHDCQHCWMENTDVPNDGPIQCL 1013

Query: 1450 TCRREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQPFNPRSLIQEQQRYIGWC 1271
             C+R + + +RI+CP C + +CG C    FD  + V K    P+NPR+L++EQQRYI WC
Sbjct: 1014 CCKRNSQKNFRIHCPICKVTSCGLCSNFCFDKSIQVKKEYVAPYNPRNLLEEQQRYIEWC 1073

Query: 1270 EGEIQRLKDELEYYKNKMEREIQAVRMEGDA-ELEENRLKVEQLELENHDRRKQLQDE-- 1100
            E E++RLK+ + +           +RME D  +LE   LK +  +L+   + K L ++  
Sbjct: 1074 ELEMKRLKESISHDNE--------LRMENDRLQLENQDLKRQIAKLQEKQKMKALMEDLG 1125

Query: 1099 EQEVPEQSLQVLIDEGAIKEYS-------------AVVSEKPKTCPNR------------ 995
            E+   E+ + VL++E   K  +              V+  + K C ++            
Sbjct: 1126 EEYYSEEEVNVLVEEWDNKRVTKELDDLEAELNKVGVIIPEEKVCISKEGEKIKPISKSM 1185

Query: 994  LYNLMVEIIIPKVTPFKINAILGTGAATCCIDQNSAPKEAIEDNTFVINFSGINSQTTAN 815
            L    V++ IP V  F +NAIL TGA TCC+D+   P+EA+E N ++++F GINS+TTAN
Sbjct: 1186 LIKFQVKLEIPDVPEFTVNAILDTGATTCCVDERVIPQEALEANPYLVHFRGINSKTTAN 1245

Query: 814  KKLKGGLMKIGEHQFRIPYTYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVTFYKQI 635
            KKLK G M IG+ QF++PYTY+FPM +   IQMILG NFIRAM GGVRI+G+EVTFYK +
Sbjct: 1246 KKLKYGRMIIGDQQFKVPYTYAFPMTISDDIQMILGCNFIRAMHGGVRIEGNEVTFYKYV 1305

Query: 634  TTIQTKQ-------------------EPIAATTXXXXXXXXXEYYQLKEM-GQDILGTTQ 515
            T I  +Q                   E +   T             +++M  Q  +G   
Sbjct: 1306 TKIMAQQGNAMVRTEVISEEEEYSAVEEVCTGTVIHPEFGNKYQKLIEDMKNQGYIGEDP 1365

Query: 514  *CIGRKNQVQCKIE 473
                +KNQV CK+E
Sbjct: 1366 MKYWQKNQVTCKLE 1379


>gb|AHG32725.1| ORF3, partial [Dioscorea rotundata]
          Length = 1257

 Score =  294 bits (753), Expect = 1e-83
 Identities = 173/479 (36%), Positives = 262/479 (54%), Gaps = 35/479 (7%)
 Frame = -1

Query: 1648 ESFQQFQGINSLIKEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQ 1469
            E  +  Q +N +I+ ++L   Q+   Y+LG  GGW+  V+VT+++HDC+H+W+Y      
Sbjct: 348  EGGEGLQSLNPVIQHHLLYLRQEDGKYFLGG-GGWRAAVQVTQQEHDCRHQWEY---YIL 403

Query: 1468 QIIKCHTCRREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQPFNPRSLIQEQQ 1289
                C  CR+E  ++W   C  C I  CG C  +Y  LE+P  K   Q +NP  L+ EQQ
Sbjct: 404  NTGSCRFCRKEITKRWHAKCMHCSIVTCGFCSQHYVQLEIPCQKEEVQIYNPHRLLYEQQ 463

Query: 1288 RYIGWCEGEIQRLKDELEYYKNKMEREIQAVRMEGDAELEENR-------LKVEQLELEN 1130
             YI +CE EI++ K+  +  +   E +I A  +    E+EE R       L+ ++LELEN
Sbjct: 464  EYIKFCEVEIEKWKNSAKASEKVAEDKILAASIRHAVEVEELRKELAAVKLEKDRLELEN 523

Query: 1129 HDRRKQLQDEEQEVPEQSLQVLIDEGAIKEYS-AVVSEKPKTCPNRLYNLMVEIIIPKVT 953
             D ++ L++ EQ      + VLI +G  K+ + A ++ K K   N LYNL V++ IP   
Sbjct: 524  RDLKRILEESEQ------VNVLICDGREKKITTASLASKEKR--NGLYNLTVQLEIPGSA 575

Query: 952  PFKINAILGTGAATCCIDQNSAPKEAIEDNTFVINFSGINSQTTANKKLKGGLMKIGEHQ 773
            P  +NAIL TGA  CCI++   PKE +E+NTF +  +G NS+  A KKLK G+M+IG++Q
Sbjct: 576  PINVNAILDTGATNCCINEEGLPKEILEENTFEVKLTGANSEMVAKKKLKNGIMRIGDNQ 635

Query: 772  FRIPYTYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVTFYKQITTIQTKQEPIAATT 593
            FRIPYT++FP++L GG Q+I+G NFIRAM+GGVRI+G  VTFYK +TT++T+Q+      
Sbjct: 636  FRIPYTFAFPLRLGGGEQLIIGCNFIRAMNGGVRIEGDTVTFYKNVTTVKTQQQVPKLLA 695

Query: 592  XXXXXXXXXEYYQLKEMGQDI----------------------LGTTQ*CIGRKNQVQCK 479
                     EY +L++    I                      +G        KNQV C+
Sbjct: 696  LEELEMDEDEYIELQQSVSAIEPSNYFSNKLSQVLQELKQAGYIGDDPLKFWSKNQVTCE 755

Query: 478  IE----DPWNPEDPAMKITTSDQEWLRSNRKPLPKSSTAFESSSKYASSKNMI-SGITL 317
            +     D    + P   +T +  E  R +   L K     ES S++ ++  ++ SG T+
Sbjct: 756  LNIINPDLTIQDKPLKHVTPAMSETFRKHIDALLKLKVIRESKSRHRTTAFIVYSGTTV 814


>gb|ANV20899.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1892

 Score =  295 bits (756), Expect = 3e-83
 Identities = 161/373 (43%), Positives = 222/373 (59%), Gaps = 28/373 (7%)
 Frame = -1

Query: 1648 ESFQQFQGINSLIKEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQ 1469
            E   +   +NS+    +     +  TYWLG  GGW+  VKVT ++H+C H W Y EE   
Sbjct: 943  EDNNEVHNLNSITHSSLFYLRAEDNTYWLGG-GGWRFAVKVTPQEHNCAHSWSYYEE--- 998

Query: 1468 QIIKCHTCRREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQP-FNPRSLIQEQ 1292
            Q   C  C+RE M+++  +C +C I  CG C  +Y   ++P  +   +P + PR L+ EQ
Sbjct: 999  QSRTCRFCKREVMKRFNAHCSKCSITTCGMCSNHYLWFQIPCQQEEVRPVYEPRQLMNEQ 1058

Query: 1291 QRYIGWCEGEIQRLKDELEYYKNKMEREIQAVRM----EGDAELEEN---RLKVEQLELE 1133
               I  CE EI RLK E+   K   E EI ++++    E D   +EN   RL+ E+L+LE
Sbjct: 1059 MTCIKHCEEEIARLKQEVAAAKILSENEIVSMKIREAVETDTLRKENETLRLENERLQLE 1118

Query: 1132 NHDRRK--------------------QLQDEEQEVPEQSLQVLIDEGAIKEYSAVVSEKP 1013
              D  K                    Q+Q  ++ + E+ L V+I EG  ++  A  S + 
Sbjct: 1119 VADLNKIIKGKQPIIPEDEELEELKQQVQQLKKSLEEKRLGVIICEGKGEQVLATTSSR- 1177

Query: 1012 KTCPNRLYNLMVEIIIPKVTPFKINAILGTGAATCCIDQNSAPKEAIEDNTFVINFSGIN 833
                N LYNL+VE+ IP + PF +NAIL TGA  CCI++   PK A+EDNTF + F+G N
Sbjct: 1178 ----NGLYNLVVELSIPGILPFSVNAILDTGATNCCINEEGLPKGALEDNTFEVTFTGAN 1233

Query: 832  SQTTANKKLKGGLMKIGEHQFRIPYTYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEV 653
            S   ANKKLKGG+MKIG+HQFRIPYT++FP++L GG Q+ILG NFIRAM GG+RI+G EV
Sbjct: 1234 SVMKANKKLKGGMMKIGDHQFRIPYTFAFPLRLGGGEQLILGCNFIRAMQGGLRIEGDEV 1293

Query: 652  TFYKQITTIQTKQ 614
            TFYK +TTI+T+Q
Sbjct: 1294 TFYKNVTTIKTQQ 1306


>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus]
 gb|AGV08293.1| ORF3 [Piper yellow mottle virus]
          Length = 1925

 Score =  291 bits (746), Expect = 5e-82
 Identities = 167/435 (38%), Positives = 240/435 (55%), Gaps = 50/435 (11%)
 Frame = -1

Query: 1627 GINSLIKEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQQ-IIKCH 1451
            G  + +  YI VF ++  TYW+GK G WQP++KVT++ HDCQH W  N ++     I+C 
Sbjct: 953  GSIATMTHYINVFFEEDRTYWVGKAGSWQPMIKVTQKVHDCQHCWMENTDVPNDGPIQCL 1012

Query: 1450 TCRREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQPFNPRSLIQEQQRYIGWC 1271
             C+R + + +RI+CP C + +CG C    FD  + V K    P+NPR+L++EQQRYI WC
Sbjct: 1013 CCKRNSQKNFRIHCPICKVTSCGLCSTFCFDKSIQVKKEYVAPYNPRNLLEEQQRYIEWC 1072

Query: 1270 EGEIQRLKDELEYYKNKMEREIQAVRMEGDAELEENRLKVEQLE-LENHDRRKQLQDE-- 1100
            E E++RLK+ +         +   +RME D    ENR    Q+E L++  + K L ++  
Sbjct: 1073 ELEMKRLKESII--------QNDELRMENDRLQLENRDLKRQIEKLQDKQKMKALMEDLG 1124

Query: 1099 EQEVPEQSLQVLIDEGAIKEYS-------------AVVSEKPKTCPNR------------ 995
            E+   E+ + VL+++   K  +              V+  + K C ++            
Sbjct: 1125 EEFDYEEEVNVLVEDWDNKRVTKELDDLEAELNKVGVIIPEEKICISKEGEKIKPISKSM 1184

Query: 994  LYNLMVEIIIPKVTPFKINAILGTGAATCCIDQNSAPKEAIEDNTFVINFSGINSQTTAN 815
            L    V++ IP V  F +NAIL TGA TCCID+   P+EA+E N ++++F GINS+TTAN
Sbjct: 1185 LIKFQVKLEIPDVPEFTVNAILDTGATTCCIDERVIPQEALEANPYLVHFRGINSKTTAN 1244

Query: 814  KKLKGGLMKIGEHQFRIPYTYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVTFYKQI 635
            KKLK G M IG+ QF++PYTY+FPM +   IQMILG NFIRAM GGVRI+G+EVTFYK +
Sbjct: 1245 KKLKYGRMIIGDQQFKVPYTYAFPMTISDDIQMILGCNFIRAMHGGVRIEGNEVTFYKYV 1304

Query: 634  TTIQTKQ--------------------EPIAATTXXXXXXXXXEYYQLKEM-GQDILGTT 518
            T I  +Q                    E I   T             +++M  Q  +G  
Sbjct: 1305 TKIMAQQGNAMVRTEVISEEEEEYSAVEEICTGTVIHPEFGNKYQKLIEDMKNQGYIGED 1364

Query: 517  Q*CIGRKNQVQCKIE 473
                 +KNQV CK+E
Sbjct: 1365 PMKYWQKNQVTCKLE 1379


>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1967

 Score =  291 bits (745), Expect = 7e-82
 Identities = 152/345 (44%), Positives = 219/345 (63%), Gaps = 13/345 (3%)
 Frame = -1

Query: 1612 IKEYILVFHQD-SMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQQI-IKCHTCRR 1439
            I+E   VF ++ + TYWLGK GG+Q LV+++KE + CQH+W+ N+ I+    ++C+ C+R
Sbjct: 975  IEEQCFVFQEECNGTYWLGKRGGYQDLVQISKEIYYCQHEWEENQPIDDSAYVRCYPCKR 1034

Query: 1438 EAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQPFNPRSLIQEQQRYIGWCEGEI 1259
            E  ++ R++C  C I +C  CGP YF+ ++ V  +   PFN + L+Q+QQ YI WC  EI
Sbjct: 1035 ETTQRARLHCKLCHITSCLMCGPTYFNKKITVQPIPQAPFNQKGLLQQQQEYIAWCNNEI 1094

Query: 1258 QRLKDELEYYKN-KMEREIQAVRMEGDAELEENRLKVEQLELENHDRRKQLQDEEQEVPE 1082
             RLK+E+ +YK    ERE+Q        +LE++R      EL   D R++          
Sbjct: 1095 ARLKEEVAFYKQLAQERELQL-------QLEQSRK-----ELAGADSRRR---------- 1132

Query: 1081 QSLQVLIDEGAI----KEYSAVVSE------KPKTCPNRLYNLMVEIIIPKVTPFKINAI 932
            +   V+IDEG+     +E + +V+       K +   N LYN+ V + IP +  F + AI
Sbjct: 1133 KDKGVVIDEGSCYFNPEETTRIVAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAI 1192

Query: 931  LGTGAATCCIDQNSAPKEAIEDNTFVINFSGINSQTTANKKLKGGLMKIGEHQFRIPYTY 752
            L TGA TCCID  S PK+A+E+N+FV+NFSGINS+    +K+K G M I EH FRIPY Y
Sbjct: 1193 LDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKAGKMFINEHYFRIPYCY 1252

Query: 751  SFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVTFYKQITTIQTK 617
            SF M++  GIQ+ILG NFIR+M GGVR++G+ VTFYKQIT+I T+
Sbjct: 1253 SFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTVTFYKQITSINTR 1297


>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1968

 Score =  291 bits (744), Expect = 1e-81
 Identities = 178/488 (36%), Positives = 265/488 (54%), Gaps = 45/488 (9%)
 Frame = -1

Query: 1612 IKEYILVFHQD-SMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQQI-IKCHTCRR 1439
            ++E   VF ++ + TYWLGK GG+Q LV+++KE + CQH+W+ N+ I     ++C+ C+R
Sbjct: 976  LEEQCFVFQEECNGTYWLGKRGGYQDLVQISKEIYYCQHEWEENQPINDPAHVRCYPCKR 1035

Query: 1438 EAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQPFNPRSLIQEQQRYIGWCEGEI 1259
            E  ++ R++C  C I +C  CGP YF+ ++ V  +   PFN + L+Q+QQ YI WC  EI
Sbjct: 1036 ETTQRARLHCKLCHITSCLMCGPTYFNKKITVQPIPQAPFNQKGLLQQQQEYIAWCNNEI 1095

Query: 1258 QRLKDELEYYKN-KMEREIQAVRMEGDAELEENRLKVEQLELENHDRRKQLQDEEQEVPE 1082
             RLK+E+ +YK    ERE+Q        +LE++R      EL   D R++          
Sbjct: 1096 ARLKEEVAFYKQLAQERELQL-------QLEQSRK-----ELAGTDARRR---------- 1133

Query: 1081 QSLQVLIDEGAI----KEYSAVVSE------KPKTCPNRLYNLMVEIIIPKVTPFKINAI 932
            +   V+IDEG+     +E + +V+       K +   N LYN+ V + IP +  F + AI
Sbjct: 1134 KDKGVVIDEGSCYFNPEETTRIVAHGDTQVTKTRPVRNMLYNMDVRMEIPGIPAFTVKAI 1193

Query: 931  LGTGAATCCIDQNSAPKEAIEDNTFVINFSGINSQTTANKKLKGGLMKIGEHQFRIPYTY 752
            L TGA TCCID  S PK+A+E+N+FV+NFSGINS+    +KLK G M I EH FRIPY Y
Sbjct: 1194 LDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKLKAGKMFINEHYFRIPYCY 1253

Query: 751  SFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVTFYKQITTIQTK--------------- 617
            SF M++  GIQ+ILG NFIR+M GGVR++G+ +TFYKQIT+I T+               
Sbjct: 1254 SFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQITSINTRLAAPLLKQEEEEKEE 1313

Query: 616  ----------QEPIAATTXXXXXXXXXEYYQLKE--MGQDILGTTQ*CIGRKNQVQCKIE 473
                      QE +A +T         ++  L +    Q  +G        KNQV C + 
Sbjct: 1314 ELNLEEHRLIQEMVAYSTERPFVQFQQKFAGLIQDLKAQGYIGEEPMKYWAKNQVVCHL- 1372

Query: 472  DPWNP-----EDPAMKITTSDQEWLRSNRKPLPKSSTAFESSSKYASSKNMISGITLIGK 308
            D  NP     + P   +T   +E  R + + L K      S S++ ++  +++  T I  
Sbjct: 1373 DIKNPDMVIEDRPLKHVTPQMEESFRKHVEALLKIGAIRPSKSRHRTTAIIVNSGTSIDP 1432

Query: 307  DPRKTIIG 284
               K + G
Sbjct: 1433 ITGKEVKG 1440


>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
          Length = 1490

 Score =  289 bits (740), Expect = 2e-81
 Identities = 150/345 (43%), Positives = 219/345 (63%), Gaps = 13/345 (3%)
 Frame = -1

Query: 1612 IKEYILVFHQD-SMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQQI-IKCHTCRR 1439
            I+E   VF ++ + TYWLGK GG+Q LV+++KE + CQH+W+ N+ I+    ++C+ C+R
Sbjct: 499  IEEQCFVFQEECNGTYWLGKRGGYQDLVQISKEIYYCQHEWEENQPIDDPAHVRCYPCKR 558

Query: 1438 EAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQPFNPRSLIQEQQRYIGWCEGEI 1259
            E  ++ R++C  C I +C  CGP YF+ ++ V  +   PFN + L+Q+QQ YI WC  EI
Sbjct: 559  ETTQRARLHCKLCHITSCLMCGPTYFNKKITVQPMPQAPFNQKGLLQQQQEYIAWCNNEI 618

Query: 1258 QRLKDELEYYKN-KMEREIQAVRMEGDAELEENRLKVEQLELENHDRRKQLQDEEQEVPE 1082
             RLK+E+ +YK    ERE+Q        +LE++R      EL   D R++          
Sbjct: 619  ARLKEEVAFYKQLAQERELQL-------QLEQSRK-----ELAGTDARRR---------- 656

Query: 1081 QSLQVLIDEGAI----KEYSAVVSE------KPKTCPNRLYNLMVEIIIPKVTPFKINAI 932
            +   V+IDEG+     +E + +++       K +   N LYN+ V + IP +  F + AI
Sbjct: 657  KDKGVVIDEGSCYFNPEETTRIIAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAI 716

Query: 931  LGTGAATCCIDQNSAPKEAIEDNTFVINFSGINSQTTANKKLKGGLMKIGEHQFRIPYTY 752
            L TGA TCCID  S PK+A+E+N+FV+NFSGINS+    +K+K G M I EH FRIPY Y
Sbjct: 717  LDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKAGKMFINEHYFRIPYCY 776

Query: 751  SFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVTFYKQITTIQTK 617
            SF M++  GIQ+ILG NFIR+M GGVR++G+ +TFYKQIT+I T+
Sbjct: 777  SFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQITSINTR 821


>gb|AIK01816.1| ORF3 [Piper yellow mottle virus]
          Length = 1925

 Score =  290 bits (741), Expect = 2e-81
 Identities = 166/435 (38%), Positives = 239/435 (54%), Gaps = 50/435 (11%)
 Frame = -1

Query: 1627 GINSLIKEYILVFHQDSMTYWLGKEGGWQPLVKVTKEQHDCQHKWQYNEEIEQQ-IIKCH 1451
            G  + +  YI VF ++  TYW+GK G WQP++KVT++ HDCQH W  N ++     I+C 
Sbjct: 953  GSIATMTHYINVFFEEDRTYWVGKAGSWQPMIKVTQKVHDCQHCWMENTDVPNDGPIQCL 1012

Query: 1450 TCRREAMRKWRIYCPQCDIAACGQCGPNYFDLEVPVAKVRAQPFNPRSLIQEQQRYIGWC 1271
             C+R + + +RI+CP C + +CG C    FD  + V K    P+NPR+L++EQQRYI WC
Sbjct: 1013 CCKRNSQKNFRIHCPICKVTSCGLCSTFCFDKSIQVKKEYVAPYNPRNLLEEQQRYIEWC 1072

Query: 1270 EGEIQRLKDELEYYKNKMEREIQAVRMEGDAELEENRLKVEQLE-LENHDRRKQLQDE-- 1100
            E E++RLK+ +         +   +RME D    ENR    Q+E L++  + K L ++  
Sbjct: 1073 ELEMKRLKESII--------QNDELRMENDRLQLENRDLKRQIEKLQDKQKMKALMEDLG 1124

Query: 1099 EQEVPEQSLQVLIDEGAIKEYS-------------AVVSEKPKTCPNR------------ 995
            E+   E+ + VL+++   K  +              V+  + K C ++            
Sbjct: 1125 EEFDYEEEVNVLVEDWDNKRVTKELDDLEAELNKVGVIIPEEKICISKEGEKIKPISKSM 1184

Query: 994  LYNLMVEIIIPKVTPFKINAILGTGAATCCIDQNSAPKEAIEDNTFVINFSGINSQTTAN 815
            L    V++ IP V  F +NAIL TGA  CCID+   P+EA+E N ++++F GINS+TTAN
Sbjct: 1185 LIKFQVKLEIPDVPEFTVNAILDTGATACCIDERVIPQEALEANPYLVHFRGINSKTTAN 1244

Query: 814  KKLKGGLMKIGEHQFRIPYTYSFPMKLEGGIQMILGSNFIRAMSGGVRIQGSEVTFYKQI 635
            KKLK G M IG+ QF++PYTY+FPM +   IQMILG NFIRAM GGVRI+G+EVTFYK +
Sbjct: 1245 KKLKYGRMIIGDQQFKVPYTYAFPMTISDDIQMILGCNFIRAMHGGVRIEGNEVTFYKYV 1304

Query: 634  TTIQTKQ--------------------EPIAATTXXXXXXXXXEYYQLKEM-GQDILGTT 518
            T I  +Q                    E I   T             +++M  Q  +G  
Sbjct: 1305 TKIMAQQGNAMVRTEVISEEEEEYSAVEEICTGTVIHPEFGNKYQKLIEDMKNQGYIGED 1364

Query: 517  Q*CIGRKNQVQCKIE 473
                 +KNQV CK+E
Sbjct: 1365 PMKYWQKNQVTCKLE 1379