BLASTX nr result
ID: Cheilocostus21_contig00006477
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00006477
(408 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009402530.1| PREDICTED: putative exosome complex componen... 86 1e-17
ref|XP_020106314.1| putative exosome complex component rrp40 iso... 77 2e-14
gb|OAY75957.1| putative exosome complex component rrp40 [Ananas ... 77 2e-14
ref|XP_010924257.1| PREDICTED: putative exosome complex componen... 76 6e-14
ref|XP_019461415.1| PREDICTED: putative exosome complex componen... 72 1e-12
ref|XP_012080072.1| putative exosome complex component rrp40 [Ja... 71 3e-12
ref|XP_018467456.1| PREDICTED: putative exosome complex componen... 70 4e-12
ref|XP_020255546.1| putative exosome complex component rrp40 iso... 71 4e-12
ref|XP_010251262.1| PREDICTED: putative exosome complex componen... 70 6e-12
gb|OVA07587.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 ... 70 6e-12
ref|XP_004298940.1| PREDICTED: putative exosome complex componen... 70 6e-12
ref|XP_020575647.1| LOW QUALITY PROTEIN: putative exosome comple... 70 6e-12
gb|AGU28446.1| PNAS-3 related protein, partial [Sinapis alba] 70 6e-12
ref|XP_024171341.1| putative exosome complex component rrp40 iso... 70 7e-12
ref|XP_024171340.1| putative exosome complex component rrp40 iso... 70 7e-12
dbj|GAY38871.1| hypothetical protein CUMW_040050 [Citrus unshiu] 70 8e-12
ref|XP_006476772.1| PREDICTED: putative exosome complex componen... 70 8e-12
ref|XP_006439811.1| putative exosome complex component rrp40 [Ci... 70 8e-12
ref|XP_024171339.1| putative exosome complex component rrp40 iso... 70 8e-12
ref|XP_010251261.1| PREDICTED: putative exosome complex componen... 70 8e-12
>ref|XP_009402530.1| PREDICTED: putative exosome complex component rrp40 [Musa acuminata
subsp. malaccensis]
Length = 241
Score = 85.5 bits (210), Expect = 1e-17
Identities = 41/55 (74%), Positives = 45/55 (81%)
Frame = +2
Query: 239 MKAELSELPSVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGK 403
M AE S+ P LV++ VVPGDTVLDLT MANQTIKLG GLRQDCDTIS +KAGK
Sbjct: 1 MNAETSDAPPTSLVDRTVVPGDTVLDLTAMANQTIKLGAGLRQDCDTISVMKAGK 55
>ref|XP_020106314.1| putative exosome complex component rrp40 isoform X1 [Ananas
comosus]
Length = 235
Score = 77.0 bits (188), Expect = 2e-14
Identities = 37/44 (84%), Positives = 41/44 (93%)
Frame = +2
Query: 272 DLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGK 403
+LV+K VVPGD VLDL+TMANQTIKLG GLRQDCDTISA+KAGK
Sbjct: 6 NLVDKPVVPGDVVLDLSTMANQTIKLGAGLRQDCDTISAMKAGK 49
>gb|OAY75957.1| putative exosome complex component rrp40 [Ananas comosus]
Length = 235
Score = 77.0 bits (188), Expect = 2e-14
Identities = 37/44 (84%), Positives = 41/44 (93%)
Frame = +2
Query: 272 DLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGK 403
+LV+K VVPGD VLDL+TMANQTIKLG GLRQDCDTISA+KAGK
Sbjct: 6 NLVDKPVVPGDVVLDLSTMANQTIKLGAGLRQDCDTISAMKAGK 49
>ref|XP_010924257.1| PREDICTED: putative exosome complex component rrp40 [Elaeis
guineensis]
Length = 242
Score = 75.9 bits (185), Expect = 6e-14
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = +2
Query: 254 SELPSVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGK 403
S P ++++V+PGDTVLDL+TMANQTIKLG GLRQDCDTIS +KAGK
Sbjct: 7 SNPPLTSCIDRIVLPGDTVLDLSTMANQTIKLGEGLRQDCDTISVMKAGK 56
>ref|XP_019461415.1| PREDICTED: putative exosome complex component rrp40 [Lupinus
angustifolius]
ref|XP_019461416.1| PREDICTED: putative exosome complex component rrp40 [Lupinus
angustifolius]
ref|XP_019461417.1| PREDICTED: putative exosome complex component rrp40 [Lupinus
angustifolius]
ref|XP_019461418.1| PREDICTED: putative exosome complex component rrp40 [Lupinus
angustifolius]
ref|XP_019461419.1| PREDICTED: putative exosome complex component rrp40 [Lupinus
angustifolius]
gb|OIW02161.1| hypothetical protein TanjilG_02385 [Lupinus angustifolius]
Length = 237
Score = 72.4 bits (176), Expect = 1e-12
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = +2
Query: 263 PSVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGK 403
PS + V+K+V PGD VLDL+TM NQTIKLG GLRQDCDTIS KAG+
Sbjct: 5 PSTNFVDKLVCPGDVVLDLSTMTNQTIKLGGGLRQDCDTISVTKAGR 51
>ref|XP_012080072.1| putative exosome complex component rrp40 [Jatropha curcas]
gb|KDP31104.1| hypothetical protein JCGZ_11480 [Jatropha curcas]
Length = 241
Score = 71.2 bits (173), Expect = 3e-12
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = +2
Query: 239 MKAELSELPSVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGK 403
M+A+ S P+ LV+K+VVPGD V+DL+TM+NQTIKLG GLRQDCD IS K+GK
Sbjct: 1 MEAKPSSSPT-SLVDKLVVPGDVVIDLSTMSNQTIKLGGGLRQDCDAISVTKSGK 54
>ref|XP_018467456.1| PREDICTED: putative exosome complex component rrp40, partial
[Raphanus sativus]
Length = 175
Score = 69.7 bits (169), Expect = 4e-12
Identities = 34/56 (60%), Positives = 45/56 (80%)
Frame = +2
Query: 239 MKAELSELPSVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGKF 406
M A+++ P+ L++++VVPGD VLDL+ M NQTIKLG GLRQD D ISA++AGKF
Sbjct: 1 MNAQVAVSPT-SLIDQIVVPGDVVLDLSNMTNQTIKLGSGLRQDSDAISAMRAGKF 55
>ref|XP_020255546.1| putative exosome complex component rrp40 isoform X1 [Asparagus
officinalis]
gb|ONK81783.1| uncharacterized protein A4U43_C01F32830 [Asparagus officinalis]
Length = 242
Score = 70.9 bits (172), Expect = 4e-12
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = +2
Query: 239 MKAELSELPSVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGK 403
M+ + S L+ K+VVPGD VLDL+ + NQTIKLG GLRQ+CDTIS++KAGK
Sbjct: 1 MEIDSSNSHPTSLLEKIVVPGDVVLDLSKLTNQTIKLGAGLRQECDTISSMKAGK 55
>ref|XP_010251262.1| PREDICTED: putative exosome complex component rrp40 isoform X2
[Nelumbo nucifera]
Length = 216
Score = 70.1 bits (170), Expect = 6e-12
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = +2
Query: 266 SVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGK 403
+ ++++VVPGD VLDL++M+NQTIKLG GLRQDCDTIS +KAGK
Sbjct: 9 TTSFIDQIVVPGDVVLDLSSMSNQTIKLGGGLRQDCDTISVMKAGK 54
>gb|OVA07587.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 [Macleaya cordata]
Length = 241
Score = 70.5 bits (171), Expect = 6e-12
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = +2
Query: 275 LVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGK 403
LV+K+VVPGD VLDL+ MANQTIKLG GLRQDCD IS +K+GK
Sbjct: 13 LVDKIVVPGDVVLDLSKMANQTIKLGDGLRQDCDAISVMKSGK 55
>ref|XP_004298940.1| PREDICTED: putative exosome complex component rrp40 [Fragaria vesca
subsp. vesca]
Length = 241
Score = 70.5 bits (171), Expect = 6e-12
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +2
Query: 251 LSELPSVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAG 400
++E+ + V++ VVPGD VLDLT MANQTIKLG GLRQDCD I+A+KAG
Sbjct: 1 MAEIAPANFVDQSVVPGDVVLDLTNMANQTIKLGGGLRQDCDAIAAMKAG 50
>ref|XP_020575647.1| LOW QUALITY PROTEIN: putative exosome complex component rrp40
[Phalaenopsis equestris]
Length = 242
Score = 70.5 bits (171), Expect = 6e-12
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = +2
Query: 239 MKAELSELPSVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGK 403
M+ E S + LVNK V+PGD LDLT++++QTI+LG GLRQ+CD +SA+KAGK
Sbjct: 1 MEVETSSSSTSSLVNKAVLPGDVALDLTSLSDQTIRLGAGLRQNCDVVSAVKAGK 55
>gb|AGU28446.1| PNAS-3 related protein, partial [Sinapis alba]
Length = 198
Score = 69.7 bits (169), Expect = 6e-12
Identities = 34/56 (60%), Positives = 45/56 (80%)
Frame = +2
Query: 239 MKAELSELPSVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGKF 406
M A+++ P+ L++++VVPGD VLDL+ M NQTIKLG GLRQD D ISA++AGKF
Sbjct: 1 MNAQVAVSPT-SLIDQIVVPGDVVLDLSNMTNQTIKLGSGLRQDSDAISAMRAGKF 55
>ref|XP_024171341.1| putative exosome complex component rrp40 isoform X3 [Rosa
chinensis]
Length = 227
Score = 70.1 bits (170), Expect = 7e-12
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +2
Query: 251 LSELPSVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAG 400
++E+ + V++ VVPGD VLDLT MANQTIKLG GLRQDCD I+A+KAG
Sbjct: 1 MAEIAPANFVDQSVVPGDVVLDLTEMANQTIKLGGGLRQDCDAIAAMKAG 50
>ref|XP_024171340.1| putative exosome complex component rrp40 isoform X2 [Rosa
chinensis]
Length = 231
Score = 70.1 bits (170), Expect = 7e-12
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +2
Query: 251 LSELPSVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAG 400
++E+ + V++ VVPGD VLDLT MANQTIKLG GLRQDCD I+A+KAG
Sbjct: 1 MAEIAPANFVDQSVVPGDVVLDLTEMANQTIKLGGGLRQDCDAIAAMKAG 50
>dbj|GAY38871.1| hypothetical protein CUMW_040050 [Citrus unshiu]
Length = 238
Score = 70.1 bits (170), Expect = 8e-12
Identities = 31/46 (67%), Positives = 41/46 (89%)
Frame = +2
Query: 266 SVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGK 403
+ +LV+K+VVPGD VLDL++M NQTIKLG GLRQ+CD++S +KAGK
Sbjct: 7 TANLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGK 52
>ref|XP_006476772.1| PREDICTED: putative exosome complex component rrp40 [Citrus
sinensis]
ref|XP_006476773.1| PREDICTED: putative exosome complex component rrp40 [Citrus
sinensis]
ref|XP_015385315.1| PREDICTED: putative exosome complex component rrp40 [Citrus
sinensis]
ref|XP_015385316.1| PREDICTED: putative exosome complex component rrp40 [Citrus
sinensis]
gb|KDO69672.1| hypothetical protein CISIN_1g026458mg [Citrus sinensis]
gb|KDO69673.1| hypothetical protein CISIN_1g026458mg [Citrus sinensis]
Length = 238
Score = 70.1 bits (170), Expect = 8e-12
Identities = 31/46 (67%), Positives = 41/46 (89%)
Frame = +2
Query: 266 SVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGK 403
+ +LV+K+VVPGD VLDL++M NQTIKLG GLRQ+CD++S +KAGK
Sbjct: 7 TANLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGK 52
>ref|XP_006439811.1| putative exosome complex component rrp40 [Citrus clementina]
ref|XP_006439812.1| putative exosome complex component rrp40 [Citrus clementina]
gb|ESR53051.1| hypothetical protein CICLE_v10021986mg [Citrus clementina]
gb|ESR53052.1| hypothetical protein CICLE_v10021986mg [Citrus clementina]
Length = 238
Score = 70.1 bits (170), Expect = 8e-12
Identities = 31/46 (67%), Positives = 41/46 (89%)
Frame = +2
Query: 266 SVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGK 403
+ +LV+K+VVPGD VLDL++M NQTIKLG GLRQ+CD++S +KAGK
Sbjct: 7 TTNLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGK 52
>ref|XP_024171339.1| putative exosome complex component rrp40 isoform X1 [Rosa
chinensis]
gb|PRQ17313.1| putative exosome complex RNA-binding protein 1/RRP40/RRP4 [Rosa
chinensis]
Length = 241
Score = 70.1 bits (170), Expect = 8e-12
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +2
Query: 251 LSELPSVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAG 400
++E+ + V++ VVPGD VLDLT MANQTIKLG GLRQDCD I+A+KAG
Sbjct: 1 MAEIAPANFVDQSVVPGDVVLDLTEMANQTIKLGGGLRQDCDAIAAMKAG 50
>ref|XP_010251261.1| PREDICTED: putative exosome complex component rrp40 isoform X1
[Nelumbo nucifera]
Length = 243
Score = 70.1 bits (170), Expect = 8e-12
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = +2
Query: 266 SVDLVNKVVVPGDTVLDLTTMANQTIKLGVGLRQDCDTISALKAGK 403
+ ++++VVPGD VLDL++M+NQTIKLG GLRQDCDTIS +KAGK
Sbjct: 9 TTSFIDQIVVPGDVVLDLSSMSNQTIKLGGGLRQDCDTISVMKAGK 54