BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00006372
         (552 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008789193.1| PREDICTED: replication factor C subunit 3 [P...   335   e-113
ref|XP_010932468.1| PREDICTED: replication factor C subunit 3 [E...   335   e-113
ref|XP_020091015.1| replication factor C subunit 3 isoform X2 [A...   329   e-111
ref|XP_009409236.1| PREDICTED: replication factor C subunit 3 [M...   329   e-111
ref|XP_020091014.1| replication factor C subunit 3 isoform X1 [A...   329   e-110
gb|OAY73717.1| Replication factor C subunit 3 [Ananas comosus]        329   e-110
gb|ONK66158.1| uncharacterized protein A4U43_C06F4730 [Asparagus...   323   e-109
ref|XP_020270226.1| LOW QUALITY PROTEIN: replication factor C su...   323   e-108
gb|OAY73716.1| Replication factor C subunit 3 [Ananas comosus]        320   e-107
ref|XP_020599460.1| replication factor C subunit 3 [Phalaenopsis...   318   e-106
ref|XP_020675154.1| replication factor C subunit 3 [Dendrobium c...   317   e-106
ref|XP_015627208.1| PREDICTED: replication factor C subunit 3 [O...   317   e-106
gb|ACG35868.1| replication factor C subunit 3 [Zea mays]              313   e-104
ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] >g...   313   e-104
gb|PKA61556.1| hypothetical protein AXF42_Ash018844 [Apostasia s...   313   e-104
gb|ERN18175.1| hypothetical protein AMTR_s00054p00174840 [Ambore...   312   e-104
ref|XP_006856708.2| replication factor C subunit 3 [Amborella tr...   312   e-103
dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa...   311   e-103
gb|PAN08523.1| hypothetical protein PAHAL_A03541 [Panicum hallii]     309   e-103
ref|XP_006647989.1| PREDICTED: replication factor C subunit 3 [O...   309   e-103

>ref|XP_008789193.1| PREDICTED: replication factor C subunit 3 [Phoenix dactylifera]
          Length = 355

 Score =  335 bits (860), Expect = e-113
 Identities = 168/184 (91%), Positives = 180/184 (97%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGIDVVRQQIQDFASARSLSF +KS+VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA
Sbjct: 107 RGIDVVRQQIQDFASARSLSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 166

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD++HIRERLEYVIKAEGLDV +SG+TALVRLSNGD
Sbjct: 167 LICNHVNKIIPALQSRCTRFRFAPLDATHIRERLEYVIKAEGLDVAESGLTALVRLSNGD 226

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA QHV+EE+VYLCTGNPMPKDIEQIAYWLLNESFT +F++ISDIK+R
Sbjct: 227 MRKALNILQSTHMASQHVTEESVYLCTGNPMPKDIEQIAYWLLNESFTASFRYISDIKMR 286

Query: 12  KGLA 1
           KGLA
Sbjct: 287 KGLA 290


>ref|XP_010932468.1| PREDICTED: replication factor C subunit 3 [Elaeis guineensis]
          Length = 356

 Score =  335 bits (860), Expect = e-113
 Identities = 168/184 (91%), Positives = 180/184 (97%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGIDVVRQQIQDFASARSLSF +KS+VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA
Sbjct: 108 RGIDVVRQQIQDFASARSLSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 167

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD+SHIRERLEYVIKAEGLDV +SG+TALVRLSNGD
Sbjct: 168 LICNHVNKIIPALQSRCTRFRFAPLDASHIRERLEYVIKAEGLDVVESGLTALVRLSNGD 227

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA QHV+EEAVYLCTGNPMPKDIEQIAYWLLNES+T +F++ISDIK++
Sbjct: 228 MRKALNILQSTHMASQHVTEEAVYLCTGNPMPKDIEQIAYWLLNESYTASFRYISDIKMK 287

Query: 12  KGLA 1
           KGLA
Sbjct: 288 KGLA 291


>ref|XP_020091015.1| replication factor C subunit 3 isoform X2 [Ananas comosus]
          Length = 338

 Score =  329 bits (843), Expect = e-111
 Identities = 164/184 (89%), Positives = 178/184 (96%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGI VVRQQIQDFASARSLSF +K +VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA
Sbjct: 113 RGIGVVRQQIQDFASARSLSFGAKPSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 172

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPL+++HIRERL+YVIKAEGLDV +SG+TALVRLSNGD
Sbjct: 173 LICNHVNKIIPALQSRCTRFRFAPLEATHIRERLQYVIKAEGLDVDESGLTALVRLSNGD 232

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA QH++EEAVYLCTGNPMPKDIEQIAYWLLNESFT +F++ISDIK+R
Sbjct: 233 MRKALNILQSTHMASQHITEEAVYLCTGNPMPKDIEQIAYWLLNESFTTSFRYISDIKMR 292

Query: 12  KGLA 1
           KGLA
Sbjct: 293 KGLA 296


>ref|XP_009409236.1| PREDICTED: replication factor C subunit 3 [Musa acuminata subsp.
           malaccensis]
          Length = 357

 Score =  329 bits (844), Expect = e-111
 Identities = 166/184 (90%), Positives = 178/184 (96%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGIDVVRQQIQDFASARSLSF  KSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA
Sbjct: 109 RGIDVVRQQIQDFASARSLSFGPKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 168

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLDSS+IRER E+VIKAEGLDVT+SG+TALVRLS+GD
Sbjct: 169 LICNHVNKIIPALQSRCTRFRFAPLDSSNIRERTEHVIKAEGLDVTESGLTALVRLSSGD 228

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA  HV++EAVYLCTGNPMPKDIEQIAYWLLNESFT AF++ISD+K++
Sbjct: 229 MRKALNILQSTHMASPHVTDEAVYLCTGNPMPKDIEQIAYWLLNESFTAAFRYISDVKMK 288

Query: 12  KGLA 1
           KGLA
Sbjct: 289 KGLA 292


>ref|XP_020091014.1| replication factor C subunit 3 isoform X1 [Ananas comosus]
          Length = 361

 Score =  329 bits (843), Expect = e-110
 Identities = 164/184 (89%), Positives = 178/184 (96%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGI VVRQQIQDFASARSLSF +K +VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA
Sbjct: 113 RGIGVVRQQIQDFASARSLSFGAKPSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 172

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPL+++HIRERL+YVIKAEGLDV +SG+TALVRLSNGD
Sbjct: 173 LICNHVNKIIPALQSRCTRFRFAPLEATHIRERLQYVIKAEGLDVDESGLTALVRLSNGD 232

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA QH++EEAVYLCTGNPMPKDIEQIAYWLLNESFT +F++ISDIK+R
Sbjct: 233 MRKALNILQSTHMASQHITEEAVYLCTGNPMPKDIEQIAYWLLNESFTTSFRYISDIKMR 292

Query: 12  KGLA 1
           KGLA
Sbjct: 293 KGLA 296


>gb|OAY73717.1| Replication factor C subunit 3 [Ananas comosus]
          Length = 361

 Score =  329 bits (843), Expect = e-110
 Identities = 164/184 (89%), Positives = 178/184 (96%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGI VVRQQIQDFASARSLSF +K +VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA
Sbjct: 113 RGIGVVRQQIQDFASARSLSFGAKPSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 172

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPL+++HIRERL+YVIKAEGLDV +SG+TALVRLSNGD
Sbjct: 173 LICNHVNKIIPALQSRCTRFRFAPLEATHIRERLQYVIKAEGLDVDESGLTALVRLSNGD 232

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA QH++EEAVYLCTGNPMPKDIEQIAYWLLNESFT +F++ISDIK+R
Sbjct: 233 MRKALNILQSTHMASQHITEEAVYLCTGNPMPKDIEQIAYWLLNESFTTSFRYISDIKMR 292

Query: 12  KGLA 1
           KGLA
Sbjct: 293 KGLA 296


>gb|ONK66158.1| uncharacterized protein A4U43_C06F4730 [Asparagus officinalis]
          Length = 341

 Score =  323 bits (829), Expect = e-109
 Identities = 162/184 (88%), Positives = 177/184 (96%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGI VVRQQIQDFASARSLSF +   VKLVLLDEADAMTKDAQFALRRVIEK+TKSTRFA
Sbjct: 93  RGIGVVRQQIQDFASARSLSFGAPVAVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFA 152

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD+S+IRERL+YVIKAEGLDV++SG+TALVRLSNGD
Sbjct: 153 LICNHVNKIIPALQSRCTRFRFAPLDASNIRERLQYVIKAEGLDVSESGLTALVRLSNGD 212

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA QH++EEAVYLCTGNPMPKDIEQIA+WLLNESFTD+FK+ISD K++
Sbjct: 213 MRKALNILQSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYISDTKMK 272

Query: 12  KGLA 1
           KGLA
Sbjct: 273 KGLA 276


>ref|XP_020270226.1| LOW QUALITY PROTEIN: replication factor C subunit 3 [Asparagus
           officinalis]
          Length = 358

 Score =  323 bits (829), Expect = e-108
 Identities = 162/184 (88%), Positives = 177/184 (96%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGI VVRQQIQDFASARSLSF +   VKLVLLDEADAMTKDAQFALRRVIEK+TKSTRFA
Sbjct: 110 RGIGVVRQQIQDFASARSLSFGAPVAVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFA 169

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD+S+IRERL+YVIKAEGLDV++SG+TALVRLSNGD
Sbjct: 170 LICNHVNKIIPALQSRCTRFRFAPLDASNIRERLQYVIKAEGLDVSESGLTALVRLSNGD 229

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA QH++EEAVYLCTGNPMPKDIEQIA+WLLNESFTD+FK+ISD K++
Sbjct: 230 MRKALNILQSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYISDTKMK 289

Query: 12  KGLA 1
           KGLA
Sbjct: 290 KGLA 293


>gb|OAY73716.1| Replication factor C subunit 3 [Ananas comosus]
          Length = 335

 Score =  320 bits (819), Expect = e-107
 Identities = 164/184 (89%), Positives = 174/184 (94%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGI VVRQQIQDFASARSLSF +K +VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA
Sbjct: 113 RGIGVVRQQIQDFASARSLSFGAKPSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 172

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD++HIRERL+YVIKAEGLDV +SG+TALVRLSNGD
Sbjct: 173 LICNHVNKIIPALQSRCTRFRFAPLDATHIRERLQYVIKAEGLDVDESGLTALVRLSNGD 232

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA QH++EEAVYLCTGNPMPKDIEQIAYWLLNESFT     ISDIK+R
Sbjct: 233 MRKALNILQSTHMASQHITEEAVYLCTGNPMPKDIEQIAYWLLNESFTTN---ISDIKMR 289

Query: 12  KGLA 1
           KGLA
Sbjct: 290 KGLA 293


>ref|XP_020599460.1| replication factor C subunit 3 [Phalaenopsis equestris]
          Length = 357

 Score =  318 bits (815), Expect = e-106
 Identities = 159/184 (86%), Positives = 172/184 (93%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGIDVVRQQIQDFA A SLSF +K +VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA
Sbjct: 109 RGIDVVRQQIQDFAGAMSLSFGAKFSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 168

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD++HI+ERL+YV+ AEGLDV +SG  ALVRLSNGD
Sbjct: 169 LICNHVNKIIPALQSRCTRFRFAPLDAAHIKERLQYVVTAEGLDVDESGFAALVRLSNGD 228

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQST MA+QHV+EEAVYLCTGNPMPKDIEQIAYWLLNE F  +F+FISDIK+R
Sbjct: 229 MRKALNILQSTQMAFQHVTEEAVYLCTGNPMPKDIEQIAYWLLNEPFIASFRFISDIKMR 288

Query: 12  KGLA 1
           KGLA
Sbjct: 289 KGLA 292


>ref|XP_020675154.1| replication factor C subunit 3 [Dendrobium catenatum]
 ref|XP_020675163.1| replication factor C subunit 3 [Dendrobium catenatum]
          Length = 357

 Score =  317 bits (813), Expect = e-106
 Identities = 159/184 (86%), Positives = 172/184 (93%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGIDVVRQQI+DFA ARSLSF  K +VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA
Sbjct: 109 RGIDVVRQQIKDFAGARSLSFGVKFSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 168

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD++HI+ERL+YV+ AEGLDV +SG  ALVRLSNGD
Sbjct: 169 LICNHVNKIIPALQSRCTRFRFAPLDAAHIKERLQYVVAAEGLDVDESGFAALVRLSNGD 228

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQST MAYQ V+EEAVYLCTGNPMPKDIEQIAYWLLNE FT +F++ISDIK+R
Sbjct: 229 MRKALNILQSTQMAYQRVTEEAVYLCTGNPMPKDIEQIAYWLLNEPFTASFRYISDIKMR 288

Query: 12  KGLA 1
           KGLA
Sbjct: 289 KGLA 292


>ref|XP_015627208.1| PREDICTED: replication factor C subunit 3 [Oryza sativa Japonica
           Group]
 sp|Q6YZ54.1|RFC3_ORYSJ RecName: Full=Replication factor C subunit 3; Short=OsRFC3;
           AltName: Full=Activator 1 subunit 3
 dbj|BAD17147.1| putative replication factor C 36kDa subunit [Oryza sativa Japonica
           Group]
 dbj|BAD17365.1| putative replication factor C 36kDa subunit [Oryza sativa Japonica
           Group]
 dbj|BAF10194.1| Os02g0775200 [Oryza sativa Japonica Group]
 dbj|BAG91711.1| unnamed protein product [Oryza sativa Japonica Group]
 gb|EEC74095.1| hypothetical protein OsI_09136 [Oryza sativa Indica Group]
 dbj|BAS81161.1| Os02g0775200 [Oryza sativa Japonica Group]
          Length = 361

 Score =  317 bits (813), Expect = e-106
 Identities = 156/184 (84%), Positives = 175/184 (95%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGIDVVRQQIQDFASARSLSF +K +VK+VLLDEADAMTKDAQFALRRVIEKHT+STRFA
Sbjct: 113 RGIDVVRQQIQDFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFA 172

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD +H+RERL+++I++EGLDV D G+TALVRLSNGD
Sbjct: 173 LICNHVNKIIPALQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGD 232

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA + ++EEAVYLCTGNPMPKDIEQIAYWLLNESF+ +FK ISD+K+R
Sbjct: 233 MRKALNILQSTHMASKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCISDMKMR 292

Query: 12  KGLA 1
           KGLA
Sbjct: 293 KGLA 296


>gb|ACG35868.1| replication factor C subunit 3 [Zea mays]
          Length = 362

 Score =  313 bits (803), Expect = e-104
 Identities = 154/184 (83%), Positives = 173/184 (94%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGIDVVRQQIQDFA ARSLSF ++ +VKLVLLDEADAMTKDAQFALRRVIEK+T+STRFA
Sbjct: 114 RGIDVVRQQIQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFA 173

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD SH+RERL+++IK+EGL V D G+TALVRLSNGD
Sbjct: 174 LICNHVNKIIPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDDGGLTALVRLSNGD 233

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA Q ++EEAVYLCTGNPMPKDIEQIA+WLLNE F+ +FK+ISD+K+R
Sbjct: 234 MRKALNILQSTHMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMR 293

Query: 12  KGLA 1
           KGLA
Sbjct: 294 KGLA 297


>ref|NP_001136580.1| replication factor C subunit 3 [Zea mays]
 gb|ACF82215.1| unknown [Zea mays]
 gb|AQK75338.1| Replication factor C subunit 5 [Zea mays]
          Length = 362

 Score =  313 bits (803), Expect = e-104
 Identities = 154/184 (83%), Positives = 173/184 (94%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGIDVVRQQIQDFA ARSLSF ++ +VKLVLLDEADAMTKDAQFALRRVIEK+T+STRFA
Sbjct: 114 RGIDVVRQQIQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFA 173

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD SH+RERL+++IK+EGL V D G+TALVRLSNGD
Sbjct: 174 LICNHVNKIIPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDDGGLTALVRLSNGD 233

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA Q ++EEAVYLCTGNPMPKDIEQIA+WLLNE F+ +FK+ISD+K+R
Sbjct: 234 MRKALNILQSTHMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMR 293

Query: 12  KGLA 1
           KGLA
Sbjct: 294 KGLA 297


>gb|PKA61556.1| hypothetical protein AXF42_Ash018844 [Apostasia shenzhenica]
          Length = 357

 Score =  313 bits (801), Expect = e-104
 Identities = 158/184 (85%), Positives = 167/184 (90%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGI+VVRQQIQDFA ARSLSF +KS VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA
Sbjct: 109 RGIEVVRQQIQDFAGARSLSFGAKSFVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 168

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD+ HIRERL YVIK EG+DV   G+ ALVRLSNGD
Sbjct: 169 LICNHVNKIIPALQSRCTRFRFAPLDADHIRERLNYVIKTEGVDVDKGGLAALVRLSNGD 228

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQST MA  HV+EEAVYLCTGNPMPKDIEQI YWLLNE FT +F++ISDIK R
Sbjct: 229 MRKALNILQSTQMASHHVTEEAVYLCTGNPMPKDIEQITYWLLNEPFTASFRYISDIKTR 288

Query: 12  KGLA 1
           KGLA
Sbjct: 289 KGLA 292


>gb|ERN18175.1| hypothetical protein AMTR_s00054p00174840 [Amborella trichopoda]
          Length = 359

 Score =  312 bits (799), Expect = e-104
 Identities = 154/184 (83%), Positives = 173/184 (94%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGIDVVRQQIQDFAS +S SF +KS+VKLVLLDEADAMTKDAQFALRRVIEK+TKSTRFA
Sbjct: 111 RGIDVVRQQIQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFA 170

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD++H+RERL+YVIKAEGLDV +SG++A+VRLSNGD
Sbjct: 171 LICNHVNKIIPALQSRCTRFRFAPLDAAHVRERLQYVIKAEGLDVDESGLSAVVRLSNGD 230

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA QHVSE+AVYLCTGNPMPKD+EQI+ WLLNE F  ++K+ISD+K  
Sbjct: 231 MRKALNILQSTHMASQHVSEKAVYLCTGNPMPKDVEQISNWLLNEDFATSYKYISDMKTT 290

Query: 12  KGLA 1
           KGLA
Sbjct: 291 KGLA 294


>ref|XP_006856708.2| replication factor C subunit 3 [Amborella trichopoda]
 ref|XP_020530645.1| replication factor C subunit 3 [Amborella trichopoda]
          Length = 398

 Score =  312 bits (799), Expect = e-103
 Identities = 154/184 (83%), Positives = 173/184 (94%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGIDVVRQQIQDFAS +S SF +KS+VKLVLLDEADAMTKDAQFALRRVIEK+TKSTRFA
Sbjct: 150 RGIDVVRQQIQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFA 209

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD++H+RERL+YVIKAEGLDV +SG++A+VRLSNGD
Sbjct: 210 LICNHVNKIIPALQSRCTRFRFAPLDAAHVRERLQYVIKAEGLDVDESGLSAVVRLSNGD 269

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA QHVSE+AVYLCTGNPMPKD+EQI+ WLLNE F  ++K+ISD+K  
Sbjct: 270 MRKALNILQSTHMASQHVSEKAVYLCTGNPMPKDVEQISNWLLNEDFATSYKYISDMKTT 329

Query: 12  KGLA 1
           KGLA
Sbjct: 330 KGLA 333


>dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa Japonica Group]
          Length = 367

 Score =  311 bits (796), Expect = e-103
 Identities = 156/190 (82%), Positives = 175/190 (92%), Gaps = 6/190 (3%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGIDVVRQQIQDFASARSLSF +K +VK+VLLDEADAMTKDAQFALRRVIEKHT+STRFA
Sbjct: 113 RGIDVVRQQIQDFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFA 172

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD +H+RERL+++I++EGLDV D G+TALVRLSNGD
Sbjct: 173 LICNHVNKIIPALQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGD 232

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFK------FI 31
           MRKALNILQSTHMA + ++EEAVYLCTGNPMPKDIEQIAYWLLNESF+ +FK       I
Sbjct: 233 MRKALNILQSTHMASKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCILNYQSI 292

Query: 30  SDIKLRKGLA 1
           SD+K+RKGLA
Sbjct: 293 SDMKMRKGLA 302


>gb|PAN08523.1| hypothetical protein PAHAL_A03541 [Panicum hallii]
          Length = 362

 Score =  309 bits (792), Expect = e-103
 Identities = 151/184 (82%), Positives = 173/184 (94%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGIDVVRQQIQDFA ARSLSF ++ +VKLVLLDEADAMTKDAQFALRRVIEK+T+STRFA
Sbjct: 114 RGIDVVRQQIQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFA 173

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD SH+RERL+++IK+EGL V + G+TALVRLSNGD
Sbjct: 174 LICNHVNKIIPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDEGGLTALVRLSNGD 233

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA Q ++EEAVYLCTGNPMPKDIE+IA+WLLNE F+ +F++ISD+K+R
Sbjct: 234 MRKALNILQSTHMASQQITEEAVYLCTGNPMPKDIEEIAFWLLNEPFSTSFQYISDMKMR 293

Query: 12  KGLA 1
           KGLA
Sbjct: 294 KGLA 297


>ref|XP_006647989.1| PREDICTED: replication factor C subunit 3 [Oryza brachyantha]
          Length = 362

 Score =  309 bits (791), Expect = e-103
 Identities = 152/184 (82%), Positives = 172/184 (93%)
 Frame = -1

Query: 552 RGIDVVRQQIQDFASARSLSFESKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFA 373
           RGIDVVRQQIQDFASARSLSF +K +VK+VLLDEADAMTKDAQFALRRVIEKHT+STRFA
Sbjct: 114 RGIDVVRQQIQDFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFA 173

Query: 372 LICNHVNKIIPALQSRCTRFRFAPLDSSHIRERLEYVIKAEGLDVTDSGVTALVRLSNGD 193
           LICNHVNKIIPALQSRCTRFRFAPLD +H+R+RL+++I +EGLDV D G+TALVRLSNGD
Sbjct: 174 LICNHVNKIIPALQSRCTRFRFAPLDGTHVRDRLQHIILSEGLDVDDGGLTALVRLSNGD 233

Query: 192 MRKALNILQSTHMAYQHVSEEAVYLCTGNPMPKDIEQIAYWLLNESFTDAFKFISDIKLR 13
           MRKALNILQSTHMA + ++EEAVYLCTGNPM KDIEQIA+WLLNE F+ +FK ISD+K+R
Sbjct: 234 MRKALNILQSTHMASKQITEEAVYLCTGNPMQKDIEQIAFWLLNEPFSTSFKCISDMKMR 293

Query: 12  KGLA 1
           KGLA
Sbjct: 294 KGLA 297