BLASTX nr result

ID: Cheilocostus21_contig00006238 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00006238
         (506 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAY38529.1| hypothetical protein CUMW_037420 [Citrus unshiu]...    54   1e-06
ref|XP_008807961.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-lik...    57   3e-06
ref|XP_010904950.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 [El...    56   5e-06
ref|XP_010925000.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 iso...    56   5e-06
ref|XP_019706870.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 iso...    56   5e-06

>dbj|GAY38529.1| hypothetical protein CUMW_037420 [Citrus unshiu]
 dbj|GAY38530.1| hypothetical protein CUMW_037420 [Citrus unshiu]
          Length = 69

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = +1

Query: 427 GEDCCSTQLLDGDGVFNVSGIEHFMK 504
           GE+CCSTQL+DGDG FNVSGIEHF+K
Sbjct: 4   GEECCSTQLIDGDGRFNVSGIEHFIK 29


>ref|XP_008807961.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-like [Phoenix dactylifera]
 ref|XP_008807967.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-like [Phoenix dactylifera]
          Length = 808

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +1

Query: 424 MGEDCCSTQLLDGDGVFNVSGIEHFMK 504
           MGEDCCSTQL+DGDGVFNV+GIE FMK
Sbjct: 1   MGEDCCSTQLIDGDGVFNVAGIESFMK 27


>ref|XP_010904950.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 [Elaeis guineensis]
          Length = 861

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = +1

Query: 421 DMGEDCCSTQLLDGDGVFNVSGIEHFMK 504
           +MGEDCCS QL+DGDGVFNVSGIE FMK
Sbjct: 53  EMGEDCCSIQLIDGDGVFNVSGIEKFMK 80


>ref|XP_010925000.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 isoform X2 [Elaeis
           guineensis]
          Length = 902

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = +1

Query: 421 DMGEDCCSTQLLDGDGVFNVSGIEHFMK 504
           +MG+DCCSTQL+DGDGVFNV+GIE FMK
Sbjct: 94  EMGDDCCSTQLIDGDGVFNVAGIESFMK 121


>ref|XP_019706870.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 isoform X1 [Elaeis
           guineensis]
          Length = 903

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = +1

Query: 421 DMGEDCCSTQLLDGDGVFNVSGIEHFMK 504
           +MG+DCCSTQL+DGDGVFNV+GIE FMK
Sbjct: 94  EMGDDCCSTQLIDGDGVFNVAGIESFMK 121


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