BLASTX nr result
ID: Cheilocostus21_contig00006179
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00006179
(2329 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_003434019.1| hypothetical chloroplast RF21 [Typha latifol... 206 e-115
ref|YP_740609.1| hypothetical chloroplast RF2 [Platanus occident... 196 e-114
gb|AEZ48752.1| hypothetical chloroplast RF2, partial (plastid) [... 203 e-114
ref|YP_009459114.1| Ycf2 (chloroplast) [Amomum krervanh] >gi|134... 203 e-113
gb|AGE93413.1| hypothetical chloroplast RF21 (plastid) [Alpinia ... 203 e-113
ref|YP_009093993.1| hypothetical chloroplast RF21 (chloroplast) ... 198 e-113
gb|ADD30886.1| putative RF2 protein (chloroplast) [Nelumbo nucif... 198 e-113
ref|YP_004563911.1| hypothetical chloroplast RF2 [Nelumbo lutea]... 198 e-113
ref|YP_009310005.1| hypothetical chloroplast RF2 (chloroplast) [... 201 e-113
ref|YP_009231808.1| hypothetical chloroplast RF2 (chloroplast) [... 198 e-113
ref|YP_009231789.1| hypothetical chloroplast RF2 (chloroplast) [... 198 e-113
gb|AFH01584.1| hypothetical chloroplast RF21 (chloroplast) [Nelu... 196 e-113
ref|YP_009130085.1| hypothetical chloroplast RF21 (chloroplast) ... 197 e-112
ref|YP_009429023.1| Ycf2 (chloroplast) [Alpinia oxyphylla] >gi|1... 203 e-112
ref|YP_009348507.1| Ycf2 (chloroplast) [Akebia quinata] >gi|1150... 198 e-112
ref|YP_009234430.1| Ycf2 (chloroplast) [Akebia trifoliata] >gi|1... 198 e-112
ref|YP_009428839.1| Ycf2 (chloroplast) [Decaisnea insignis] >gi|... 197 e-112
ref|YP_004940621.1| ycf2 gene product [Neottia nidus-avis] >gi|3... 193 e-112
ref|YP_009443816.1| hypothetical chloroplast RF2 (chloroplast) [... 196 e-112
ref|YP_009443652.1| hypothetical chloroplast RF2 (chloroplast) [... 196 e-112
>ref|YP_003434019.1| hypothetical chloroplast RF21 [Typha latifolia]
ref|YP_003434036.1| hypothetical chloroplast RF21 [Typha latifolia]
gb|ADA63743.1| hypothetical chloroplast RF21 (chloroplast) [Typha latifolia]
gb|ADA63761.1| hypothetical chloroplast RF21 (chloroplast) [Typha latifolia]
Length = 2293
Score = 206 bits (524), Expect(4) = e-115
Identities = 104/107 (97%), Positives = 105/107 (98%)
Frame = +2
Query: 89 IKFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIF 268
IKF+SVGSFT IFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLI
Sbjct: 31 IKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIS 90
Query: 269 RINNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
RINNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV
Sbjct: 91 RINNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 137
Score = 113 bits (282), Expect(4) = e-115
Identities = 58/78 (74%), Positives = 60/78 (76%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVA 608
LPKGK ISESCFMDPQE TWVLPINKKCIM IGKKRD CKISNETVA
Sbjct: 142 LPKGKNISESCFMDPQEITWVLPINKKCIM----RSSRWWRNQIGKKRDFCCKISNETVA 197
Query: 609 RIEISFKEKDNKYLEFLF 662
IEISFKEKD+KYLEF+F
Sbjct: 198 GIEISFKEKDSKYLEFIF 215
Score = 91.3 bits (225), Expect(4) = e-115
Identities = 43/46 (93%), Positives = 43/46 (93%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
FLSYMDDPI KDHDWELFDR SPRKKRNIINLNS QLFEILGKDLI
Sbjct: 215 FLSYMDDPIRKDHDWELFDRLSPRKKRNIINLNSRQLFEILGKDLI 260
Score = 79.0 bits (193), Expect(4) = e-115
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = +1
Query: 778 LRERLDCYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
L + L CYLMS F +KRPI+ +GFFKQQGAEATIQSN IEHV HL S NKW +SL
Sbjct: 255 LGKDLICYLMSAFREKRPIEGKGFFKQQGAEATIQSNDIEHVSHLFSRNKWGISL 309
>ref|YP_740609.1| hypothetical chloroplast RF2 [Platanus occidentalis]
ref|YP_740626.1| hypothetical chloroplast RF2 [Platanus occidentalis]
sp|Q09FY5.1|YCF2_PLAOC RecName: Full=Protein Ycf2
gb|ABI49823.1| hypothetical chloroplast RF2 (chloroplast) [Platanus occidentalis]
gb|ABI49840.1| hypothetical chloroplast RF2 (chloroplast) [Platanus occidentalis]
Length = 2293
Score = 196 bits (498), Expect(4) = e-114
Identities = 98/106 (92%), Positives = 103/106 (97%)
Frame = +2
Query: 92 KFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIFR 271
KF+SVGSFT IFFHQERF+KLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVL++R
Sbjct: 32 KFDSVGSFTHIFFHQERFIKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLLYR 91
Query: 272 INNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
INNR MVERKNLYLMGLLPIPMNSIGPRN+TLEESF SSNINRLIV
Sbjct: 92 INNRNMVERKNLYLMGLLPIPMNSIGPRNDTLEESFGSSNINRLIV 137
Score = 129 bits (323), Expect(4) = e-114
Identities = 63/78 (80%), Positives = 65/78 (83%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVA 608
LPKGKKISESCFMDP+ESTWVLPI KKCIMPE IGKKRDSSCKISNETVA
Sbjct: 142 LPKGKKISESCFMDPKESTWVLPITKKCIMPESNWGSRWWRNRIGKKRDSSCKISNETVA 201
Query: 609 RIEISFKEKDNKYLEFLF 662
RIE+SFKEKD KYLEFLF
Sbjct: 202 RIEVSFKEKDIKYLEFLF 219
Score = 82.4 bits (202), Expect(4) = e-114
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
F+SY DDPI KDHDWELFDR SPRKKRNIINLNSGQLFEIL K I
Sbjct: 219 FVSYTDDPIRKDHDWELFDRLSPRKKRNIINLNSGQLFEILVKHWI 264
Score = 78.6 bits (192), Expect(4) = e-114
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +1
Query: 796 CYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
CYLMS F +KRPI+ EGFFKQQGAE+TIQSN IEHV HL S NKW +SL
Sbjct: 265 CYLMSAFREKRPIEVEGFFKQQGAESTIQSNDIEHVSHLFSRNKWGISL 313
>gb|AEZ48752.1| hypothetical chloroplast RF2, partial (plastid) [Renealmia alpinia]
Length = 2260
Score = 203 bits (516), Expect(4) = e-114
Identities = 103/107 (96%), Positives = 103/107 (96%)
Frame = +2
Query: 89 IKFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIF 268
IKFNSVGSFT IFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYF IKGVVLLVVAVLI
Sbjct: 31 IKFNSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFMIKGVVLLVVAVLIS 90
Query: 269 RINNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
RINNRKMVERKNLYLMGLLPIPMNSIGP NETLEESFWSSNINRLIV
Sbjct: 91 RINNRKMVERKNLYLMGLLPIPMNSIGPGNETLEESFWSSNINRLIV 137
Score = 124 bits (311), Expect(4) = e-114
Identities = 62/80 (77%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPE--XXXXXXXXXXXIGKKRDSSCKISNET 602
LPKGKK+SESCFMDPQE+TWVLPINKKCIMPE IGKKRDSSCKISNET
Sbjct: 142 LPKGKKLSESCFMDPQENTWVLPINKKCIMPESNRSSRWWRWGKRIGKKRDSSCKISNET 201
Query: 603 VARIEISFKEKDNKYLEFLF 662
VA IEISFKEKD+KYLEF+F
Sbjct: 202 VAGIEISFKEKDSKYLEFIF 221
Score = 84.3 bits (207), Expect(4) = e-114
Identities = 40/46 (86%), Positives = 40/46 (86%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
FLSY DDPI KDHDWELFD S RKKRNIINLNSGQLFEILGKD I
Sbjct: 221 FLSYTDDPIRKDHDWELFDCLSSRKKRNIINLNSGQLFEILGKDFI 266
Score = 73.9 bits (180), Expect(4) = e-114
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = +1
Query: 799 YLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
YLMS F +KRPI+ EGFFKQQGAEATIQSN IEHV HL S KW +SL
Sbjct: 268 YLMSAFREKRPIEGEGFFKQQGAEATIQSNDIEHVSHLFSRKKWGISL 315
>ref|YP_009459114.1| Ycf2 (chloroplast) [Amomum krervanh]
ref|YP_009459096.1| Ycf2 (chloroplast) [Amomum krervanh]
ref|YP_009462855.1| Ycf2 (chloroplast) [Amomum compactum]
gb|AUS84036.1| Ycf2 (chloroplast) [Amomum krervanh]
gb|AUS84042.1| Ycf2 (chloroplast) [Amomum krervanh]
gb|AUW35074.1| Ycf2 (chloroplast) [Amomum compactum]
Length = 2278
Score = 203 bits (516), Expect(4) = e-113
Identities = 103/107 (96%), Positives = 103/107 (96%)
Frame = +2
Query: 89 IKFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIF 268
IKFNSVGSFT IFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYF IKGVVLLVVAVLI
Sbjct: 31 IKFNSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFMIKGVVLLVVAVLIS 90
Query: 269 RINNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
RINNRKMVERKNLYLMGLLPIPMNSIGP NETLEESFWSSNINRLIV
Sbjct: 91 RINNRKMVERKNLYLMGLLPIPMNSIGPGNETLEESFWSSNINRLIV 137
Score = 123 bits (309), Expect(4) = e-113
Identities = 62/80 (77%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPE--XXXXXXXXXXXIGKKRDSSCKISNET 602
LPKGKK+SESCFMDPQE+TWVLPIN+KCIMPE IGKKRDSSCKISNET
Sbjct: 142 LPKGKKLSESCFMDPQENTWVLPINQKCIMPESNRSSRWWRWGKRIGKKRDSSCKISNET 201
Query: 603 VARIEISFKEKDNKYLEFLF 662
VA IEISFKEKD+KYLEFLF
Sbjct: 202 VAGIEISFKEKDSKYLEFLF 221
Score = 84.3 bits (207), Expect(4) = e-113
Identities = 40/46 (86%), Positives = 40/46 (86%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
FLSY DDPI KDHDWELFD S RKKRNIINLNSGQLFEILGKD I
Sbjct: 221 FLSYTDDPIRKDHDWELFDCLSSRKKRNIINLNSGQLFEILGKDFI 266
Score = 73.9 bits (180), Expect(4) = e-113
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = +1
Query: 799 YLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
YLMS F +KRPI+ EGFFKQQGAEATIQSN IEHV HL S KW +SL
Sbjct: 268 YLMSAFREKRPIEGEGFFKQQGAEATIQSNDIEHVSHLFSRKKWGISL 315
>gb|AGE93413.1| hypothetical chloroplast RF21 (plastid) [Alpinia zerumbet]
gb|AGE93432.1| hypothetical chloroplast RF21 (plastid) [Alpinia zerumbet]
Length = 2267
Score = 203 bits (516), Expect(4) = e-113
Identities = 103/107 (96%), Positives = 103/107 (96%)
Frame = +2
Query: 89 IKFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIF 268
IKFNSVGSFT IFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYF IKGVVLLVVAVLI
Sbjct: 27 IKFNSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFMIKGVVLLVVAVLIS 86
Query: 269 RINNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
RINNRKMVERKNLYLMGLLPIPMNSIGP NETLEESFWSSNINRLIV
Sbjct: 87 RINNRKMVERKNLYLMGLLPIPMNSIGPGNETLEESFWSSNINRLIV 133
Score = 123 bits (309), Expect(4) = e-113
Identities = 62/80 (77%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPE--XXXXXXXXXXXIGKKRDSSCKISNET 602
LPKGKK+SESCFMDPQE+TWVLPIN+KCIMPE IGKKRDSSCKISNET
Sbjct: 138 LPKGKKLSESCFMDPQENTWVLPINQKCIMPESNRSSRWWRWGKRIGKKRDSSCKISNET 197
Query: 603 VARIEISFKEKDNKYLEFLF 662
VA IEISFKEKD+KYLEFLF
Sbjct: 198 VAGIEISFKEKDSKYLEFLF 217
Score = 84.3 bits (207), Expect(4) = e-113
Identities = 40/46 (86%), Positives = 40/46 (86%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
FLSY DDPI KDHDWELFD S RKKRNIINLNSGQLFEILGKD I
Sbjct: 217 FLSYTDDPIRKDHDWELFDCLSSRKKRNIINLNSGQLFEILGKDFI 262
Score = 73.9 bits (180), Expect(4) = e-113
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = +1
Query: 799 YLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
YLMS F +KRPI+ EGFFKQQGAEATIQSN IEHV HL S KW +SL
Sbjct: 264 YLMSAFREKRPIEGEGFFKQQGAEATIQSNDIEHVSHLFSRKKWGISL 311
>ref|YP_009093993.1| hypothetical chloroplast RF21 (chloroplast) [Nelumbo nucifera]
ref|YP_009094010.1| hypothetical chloroplast RF21 (chloroplast) [Nelumbo nucifera]
gb|ACN49453.1| hypothetical chloroplast RF2 (chloroplast) [Nelumbo nucifera]
gb|ACN49470.1| hypothetical chloroplast RF2 (chloroplast) [Nelumbo nucifera]
gb|AEK71646.1| hypothetical chloroplast RF2 (plastid) [Nelumbo nucifera]
gb|AFH01491.1| hypothetical chloroplast RF21 (chloroplast) [Nelumbo nucifera]
gb|AFH01512.1| hypothetical chloroplast RF21 (chloroplast) [Nelumbo nucifera]
gb|AGO98567.1| hypothetical chloroplast RF21 (chloroplast) [Nelumbo nucifera]
gb|AGO98584.1| hypothetical chloroplast RF21 (chloroplast) [Nelumbo nucifera]
gb|AIY33867.1| photosystem I assembly protein Ycf2 (chloroplast) [Nelumbo
nucifera]
gb|AIY33884.1| photosystem I assembly protein Ycf2 (chloroplast) [Nelumbo
nucifera]
Length = 2310
Score = 198 bits (504), Expect(4) = e-113
Identities = 100/106 (94%), Positives = 103/106 (97%)
Frame = +2
Query: 92 KFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIFR 271
KF+SVGSFT IFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLI+R
Sbjct: 32 KFDSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIYR 91
Query: 272 INNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
INNR MVERKNLYLMGLLPIPMNSIGPRN+TLEESF SSNINRLIV
Sbjct: 92 INNRNMVERKNLYLMGLLPIPMNSIGPRNDTLEESFGSSNINRLIV 137
Score = 124 bits (312), Expect(4) = e-113
Identities = 62/78 (79%), Positives = 63/78 (80%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVA 608
LPKG KISESCFMDP+ESTWVLPI KKCIMPE IGKKRDSSCKISNETVA
Sbjct: 142 LPKGNKISESCFMDPKESTWVLPITKKCIMPESNWGSRWWRNRIGKKRDSSCKISNETVA 201
Query: 609 RIEISFKEKDNKYLEFLF 662
IEISFKEKD KYLEFLF
Sbjct: 202 GIEISFKEKDIKYLEFLF 219
Score = 82.4 bits (202), Expect(4) = e-113
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
F+SY DDPI KDHDWELFDR SPRKKRNIINLNSGQLFEIL K I
Sbjct: 219 FVSYTDDPIRKDHDWELFDRLSPRKKRNIINLNSGQLFEILVKHWI 264
Score = 78.6 bits (192), Expect(4) = e-113
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +1
Query: 796 CYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
CYLMS F +KRPI+ EGFFKQQGAE+TIQSN IEHV HL S NKW +SL
Sbjct: 265 CYLMSAFREKRPIEVEGFFKQQGAESTIQSNDIEHVSHLFSRNKWGISL 313
>gb|ADD30886.1| putative RF2 protein (chloroplast) [Nelumbo nucifera]
Length = 2304
Score = 198 bits (504), Expect(4) = e-113
Identities = 100/106 (94%), Positives = 103/106 (97%)
Frame = +2
Query: 92 KFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIFR 271
KF+SVGSFT IFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLI+R
Sbjct: 32 KFDSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIYR 91
Query: 272 INNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
INNR MVERKNLYLMGLLPIPMNSIGPRN+TLEESF SSNINRLIV
Sbjct: 92 INNRNMVERKNLYLMGLLPIPMNSIGPRNDTLEESFGSSNINRLIV 137
Score = 124 bits (312), Expect(4) = e-113
Identities = 62/78 (79%), Positives = 63/78 (80%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVA 608
LPKG KISESCFMDP+ESTWVLPI KKCIMPE IGKKRDSSCKISNETVA
Sbjct: 142 LPKGNKISESCFMDPKESTWVLPITKKCIMPESNWGSRWWRNRIGKKRDSSCKISNETVA 201
Query: 609 RIEISFKEKDNKYLEFLF 662
IEISFKEKD KYLEFLF
Sbjct: 202 GIEISFKEKDIKYLEFLF 219
Score = 82.4 bits (202), Expect(4) = e-113
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
F+SY DDPI KDHDWELFDR SPRKKRNIINLNSGQLFEIL K I
Sbjct: 219 FVSYTDDPIRKDHDWELFDRLSPRKKRNIINLNSGQLFEILVKHWI 264
Score = 78.6 bits (192), Expect(4) = e-113
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +1
Query: 796 CYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
CYLMS F +KRPI+ EGFFKQQGAE+TIQSN IEHV HL S NKW +SL
Sbjct: 265 CYLMSAFREKRPIEVEGFFKQQGAESTIQSNDIEHVSHLFSRNKWGISL 313
>ref|YP_004563911.1| hypothetical chloroplast RF2 [Nelumbo lutea]
ref|YP_004563928.1| hypothetical chloroplast RF2 [Nelumbo lutea]
gb|ACN49368.1| hypothetical chloroplast RF2 (chloroplast) [Nelumbo lutea]
gb|ACN49385.1| hypothetical chloroplast RF2 (chloroplast) [Nelumbo lutea]
Length = 2304
Score = 198 bits (504), Expect(4) = e-113
Identities = 100/106 (94%), Positives = 103/106 (97%)
Frame = +2
Query: 92 KFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIFR 271
KF+SVGSFT IFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLI+R
Sbjct: 32 KFDSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIYR 91
Query: 272 INNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
INNR MVERKNLYLMGLLPIPMNSIGPRN+TLEESF SSNINRLIV
Sbjct: 92 INNRNMVERKNLYLMGLLPIPMNSIGPRNDTLEESFGSSNINRLIV 137
Score = 124 bits (312), Expect(4) = e-113
Identities = 62/78 (79%), Positives = 63/78 (80%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVA 608
LPKG KISESCFMDP+ESTWVLPI KKCIMPE IGKKRDSSCKISNETVA
Sbjct: 142 LPKGNKISESCFMDPKESTWVLPITKKCIMPESNWGSRWWRNRIGKKRDSSCKISNETVA 201
Query: 609 RIEISFKEKDNKYLEFLF 662
IEISFKEKD KYLEFLF
Sbjct: 202 GIEISFKEKDIKYLEFLF 219
Score = 82.4 bits (202), Expect(4) = e-113
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
F+SY DDPI KDHDWELFDR SPRKKRNIINLNSGQLFEIL K I
Sbjct: 219 FVSYTDDPIRKDHDWELFDRLSPRKKRNIINLNSGQLFEILVKHWI 264
Score = 78.6 bits (192), Expect(4) = e-113
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +1
Query: 796 CYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
CYLMS F +KRPI+ EGFFKQQGAE+TIQSN IEHV HL S NKW +SL
Sbjct: 265 CYLMSAFREKRPIEVEGFFKQQGAESTIQSNDIEHVSHLFSRNKWGISL 313
>ref|YP_009310005.1| hypothetical chloroplast RF2 (chloroplast) [Coreanomecon
hylomeconoides]
ref|YP_009310024.1| hypothetical chloroplast RF2 (chloroplast) [Coreanomecon
hylomeconoides]
gb|ALZ50148.1| hypothetical chloroplast RF2 (chloroplast) [Coreanomecon
hylomeconoides]
gb|ALZ50167.1| hypothetical chloroplast RF2 (chloroplast) [Coreanomecon
hylomeconoides]
Length = 2310
Score = 201 bits (510), Expect(4) = e-113
Identities = 100/106 (94%), Positives = 104/106 (98%)
Frame = +2
Query: 92 KFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIFR 271
KF+SVGSFTPIFFHQERFMKLFDPRIW+ILLSRDSQGSTSNRYFTIKGVVLLVVAVLI+R
Sbjct: 37 KFDSVGSFTPIFFHQERFMKLFDPRIWNILLSRDSQGSTSNRYFTIKGVVLLVVAVLIYR 96
Query: 272 INNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
INNR MVERKNLYLMGLLPIPMNSIGPRN+TLEESF SSNINRLIV
Sbjct: 97 INNRNMVERKNLYLMGLLPIPMNSIGPRNDTLEESFGSSNINRLIV 142
Score = 124 bits (311), Expect(4) = e-113
Identities = 62/78 (79%), Positives = 63/78 (80%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVA 608
LPKGKKISESCFMDP+ESTWVLPI KKCIMPE IGKKRDSSCKIS ETVA
Sbjct: 147 LPKGKKISESCFMDPKESTWVLPITKKCIMPESNWGSRWWRNRIGKKRDSSCKISKETVA 206
Query: 609 RIEISFKEKDNKYLEFLF 662
IEISFKEKD KYLEFLF
Sbjct: 207 GIEISFKEKDIKYLEFLF 224
Score = 79.7 bits (195), Expect(4) = e-113
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
F+SY DDPI KDHDWELFDR SPRKKRNIINLNSGQ FEIL K I
Sbjct: 224 FVSYTDDPIRKDHDWELFDRLSPRKKRNIINLNSGQPFEILVKHWI 269
Score = 78.2 bits (191), Expect(4) = e-113
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +1
Query: 796 CYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
CYLMS F +KRPI+ EGFFKQQGAE+TIQSN IEHV HL S NKW +SL
Sbjct: 270 CYLMSAFREKRPIEVEGFFKQQGAESTIQSNEIEHVSHLFSRNKWGISL 318
>ref|YP_009231808.1| hypothetical chloroplast RF2 (chloroplast) [Goodyera procera]
gb|AMA07074.1| hypothetical chloroplast RF2 (chloroplast) [Goodyera procera]
Length = 2283
Score = 198 bits (504), Expect(4) = e-113
Identities = 99/107 (92%), Positives = 103/107 (96%)
Frame = +2
Query: 89 IKFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIF 268
IKF+SVGSFT IFFHQERFMKLFDPRIWSILLSRDSQG+TSNRYFTI+GVVLLVV VLI
Sbjct: 31 IKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGATSNRYFTIQGVVLLVVVVLIS 90
Query: 269 RINNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
RINNRKMVERKN+YLMGLLPIPMNSIGPRNETLEESFWSSN NRLIV
Sbjct: 91 RINNRKMVERKNIYLMGLLPIPMNSIGPRNETLEESFWSSNRNRLIV 137
Score = 120 bits (301), Expect(4) = e-113
Identities = 59/78 (75%), Positives = 62/78 (79%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVA 608
LPKGK +SESCFMDPQESTWVLP KKCIMPE IGKKRDSSC+I NETVA
Sbjct: 142 LPKGKNLSESCFMDPQESTWVLPRKKKCIMPESNRGSRWWRNRIGKKRDSSCQILNETVA 201
Query: 609 RIEISFKEKDNKYLEFLF 662
IEISFKEKD+KYLEFLF
Sbjct: 202 GIEISFKEKDSKYLEFLF 219
Score = 89.7 bits (221), Expect(4) = e-113
Identities = 41/46 (89%), Positives = 42/46 (91%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
FLSY DDPI KDHDWELFDR SPRKKRNIINLNSGQLFEILGKD +
Sbjct: 219 FLSYTDDPIRKDHDWELFDRLSPRKKRNIINLNSGQLFEILGKDFL 264
Score = 73.6 bits (179), Expect(4) = e-113
Identities = 35/49 (71%), Positives = 39/49 (79%)
Frame = +1
Query: 796 CYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
CYLMS F +KRPI+ E FFKQQGA AT+QSN IEHV HL S NKW +SL
Sbjct: 265 CYLMSAFREKRPIQGESFFKQQGAGATMQSNDIEHVSHLFSRNKWGISL 313
>ref|YP_009231789.1| hypothetical chloroplast RF2 (chloroplast) [Goodyera procera]
gb|AMA07073.1| hypothetical chloroplast RF2 (chloroplast) [Goodyera procera]
Length = 2283
Score = 198 bits (504), Expect(4) = e-113
Identities = 99/107 (92%), Positives = 103/107 (96%)
Frame = +2
Query: 89 IKFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIF 268
IKF+SVGSFT IFFHQERFMKLFDPRIWSILLSRDSQG+TSNRYFTI+GVVLLVV VLI
Sbjct: 31 IKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGATSNRYFTIQGVVLLVVVVLIS 90
Query: 269 RINNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
RINNRKMVERKN+YLMGLLPIPMNSIGPRNETLEESFWSSN NRLIV
Sbjct: 91 RINNRKMVERKNIYLMGLLPIPMNSIGPRNETLEESFWSSNRNRLIV 137
Score = 120 bits (301), Expect(4) = e-113
Identities = 59/78 (75%), Positives = 62/78 (79%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVA 608
LPKGK +SESCFMDPQESTWVLP KKCIMPE IGKKRDSSC+I NETVA
Sbjct: 142 LPKGKNLSESCFMDPQESTWVLPRKKKCIMPESNRGSRWWRNRIGKKRDSSCQILNETVA 201
Query: 609 RIEISFKEKDNKYLEFLF 662
IEISFKEKD+KYLEFLF
Sbjct: 202 GIEISFKEKDSKYLEFLF 219
Score = 89.7 bits (221), Expect(4) = e-113
Identities = 41/46 (89%), Positives = 42/46 (91%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
FLSY DDPI KDHDWELFDR SPRKKRNIINLNSGQLFEILGKD +
Sbjct: 219 FLSYTDDPIRKDHDWELFDRLSPRKKRNIINLNSGQLFEILGKDFL 264
Score = 73.6 bits (179), Expect(4) = e-113
Identities = 35/49 (71%), Positives = 39/49 (79%)
Frame = +1
Query: 796 CYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
CYLMS F +KRPI+ E FFKQQGA AT+QSN IEHV HL S NKW +SL
Sbjct: 265 CYLMSAFREKRPIQGESFFKQQGAGATMQSNDIEHVSHLFSRNKWGISL 313
>gb|AFH01584.1| hypothetical chloroplast RF21 (chloroplast) [Nelumbo lutea]
gb|AFH01600.1| hypothetical chloroplast RF21 (chloroplast) [Nelumbo lutea]
Length = 2304
Score = 196 bits (498), Expect(4) = e-113
Identities = 99/106 (93%), Positives = 102/106 (96%)
Frame = +2
Query: 92 KFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIFR 271
K +SVGSFT IFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLI+R
Sbjct: 32 KLDSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIYR 91
Query: 272 INNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
INNR MVERKNLYLMGLLPIPMNSIGPRN+TLEESF SSNINRLIV
Sbjct: 92 INNRNMVERKNLYLMGLLPIPMNSIGPRNDTLEESFGSSNINRLIV 137
Score = 124 bits (312), Expect(4) = e-113
Identities = 62/78 (79%), Positives = 63/78 (80%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVA 608
LPKG KISESCFMDP+ESTWVLPI KKCIMPE IGKKRDSSCKISNETVA
Sbjct: 142 LPKGNKISESCFMDPKESTWVLPITKKCIMPESNWGSRWWRNRIGKKRDSSCKISNETVA 201
Query: 609 RIEISFKEKDNKYLEFLF 662
IEISFKEKD KYLEFLF
Sbjct: 202 GIEISFKEKDIKYLEFLF 219
Score = 82.4 bits (202), Expect(4) = e-113
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
F+SY DDPI KDHDWELFDR SPRKKRNIINLNSGQLFEIL K I
Sbjct: 219 FVSYTDDPIRKDHDWELFDRLSPRKKRNIINLNSGQLFEILVKHWI 264
Score = 78.6 bits (192), Expect(4) = e-113
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +1
Query: 796 CYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
CYLMS F +KRPI+ EGFFKQQGAE+TIQSN IEHV HL S NKW +SL
Sbjct: 265 CYLMSAFREKRPIEVEGFFKQQGAESTIQSNDIEHVSHLFSRNKWGISL 313
>ref|YP_009130085.1| hypothetical chloroplast RF21 (chloroplast) [Campynema lineare]
ref|YP_009130102.1| hypothetical chloroplast RF21 (chloroplast) [Campynema lineare]
gb|AJV88554.1| hypothetical chloroplast RF21 (chloroplast) [Campynema lineare]
gb|AJV88572.1| hypothetical chloroplast RF21 (chloroplast) [Campynema lineare]
Length = 2203
Score = 197 bits (500), Expect(4) = e-112
Identities = 99/107 (92%), Positives = 102/107 (95%)
Frame = +2
Query: 89 IKFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIF 268
IKF+SVGSFT IFFHQERFMKLFDPRIW+ILLSRDS+GS SNRYFTIKGVVLLVV VLI
Sbjct: 31 IKFDSVGSFTHIFFHQERFMKLFDPRIWNILLSRDSRGSRSNRYFTIKGVVLLVVVVLIS 90
Query: 269 RINNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
RINNRKMVERKNLYLMGLLPIPMNSIGP NETLEESFWSSNINRLIV
Sbjct: 91 RINNRKMVERKNLYLMGLLPIPMNSIGPGNETLEESFWSSNINRLIV 137
Score = 127 bits (320), Expect(4) = e-112
Identities = 62/77 (80%), Positives = 64/77 (83%)
Frame = +3
Query: 432 PKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVAR 611
PKGKKISESCFMDPQESTWVLPINK CIMPE IGKKRDSSCKISNETVA
Sbjct: 143 PKGKKISESCFMDPQESTWVLPINKNCIMPESNRGSRWWSNRIGKKRDSSCKISNETVAG 202
Query: 612 IEISFKEKDNKYLEFLF 662
IEISFKEKD+KYLEF+F
Sbjct: 203 IEISFKEKDSKYLEFIF 219
Score = 83.2 bits (204), Expect(4) = e-112
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
FLSY DDPI KD DWELFDR SPRKKRNIINL S QLFE+LGKDLI
Sbjct: 219 FLSYTDDPIRKDRDWELFDRLSPRKKRNIINLTSEQLFEVLGKDLI 264
Score = 73.6 bits (179), Expect(4) = e-112
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +1
Query: 778 LRERLDCYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
L + L CYLMS F +KRPI+ GFFKQQGAEA IQS+ IEHV HL S NKW +SL
Sbjct: 259 LGKDLICYLMSAFREKRPIEGGGFFKQQGAEAIIQSSDIEHVSHLFSRNKWGISL 313
>ref|YP_009429023.1| Ycf2 (chloroplast) [Alpinia oxyphylla]
ref|YP_009429044.1| Ycf2 (chloroplast) [Alpinia oxyphylla]
gb|ASW20485.1| Ycf2 (chloroplast) [Alpinia oxyphylla]
gb|ASW20506.1| Ycf2 (chloroplast) [Alpinia oxyphylla]
Length = 2273
Score = 203 bits (516), Expect(4) = e-112
Identities = 103/107 (96%), Positives = 103/107 (96%)
Frame = +2
Query: 89 IKFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIF 268
IKFNSVGSFT IFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYF IKGVVLLVVAVLI
Sbjct: 31 IKFNSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFMIKGVVLLVVAVLIS 90
Query: 269 RINNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
RINNRKMVERKNLYLMGLLPIPMNSIGP NETLEESFWSSNINRLIV
Sbjct: 91 RINNRKMVERKNLYLMGLLPIPMNSIGPGNETLEESFWSSNINRLIV 137
Score = 123 bits (309), Expect(4) = e-112
Identities = 62/80 (77%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPE--XXXXXXXXXXXIGKKRDSSCKISNET 602
LPKGKK+SESCFMDPQE+TWVLPIN+KCIMPE IGKKRDSSCKISNET
Sbjct: 142 LPKGKKLSESCFMDPQENTWVLPINQKCIMPESNRSSRWWRWGKRIGKKRDSSCKISNET 201
Query: 603 VARIEISFKEKDNKYLEFLF 662
VA IEISFKEKD+KYLEFLF
Sbjct: 202 VAGIEISFKEKDSKYLEFLF 221
Score = 80.5 bits (197), Expect(4) = e-112
Identities = 39/46 (84%), Positives = 39/46 (84%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
FLSY DD I KDHDWELFD S RKKRNIINLNSGQLFEILGKD I
Sbjct: 221 FLSYTDDLIRKDHDWELFDCLSSRKKRNIINLNSGQLFEILGKDFI 266
Score = 73.9 bits (180), Expect(4) = e-112
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = +1
Query: 799 YLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
YLMS F +KRPI+ EGFFKQQGAEATIQSN IEHV HL S KW +SL
Sbjct: 268 YLMSAFREKRPIEGEGFFKQQGAEATIQSNDIEHVSHLFSRKKWGISL 315
>ref|YP_009348507.1| Ycf2 (chloroplast) [Akebia quinata]
ref|YP_009348524.1| Ycf2 (chloroplast) [Akebia quinata]
gb|APY18867.1| Ycf2 (chloroplast) [Akebia quinata]
gb|APY18884.1| Ycf2 (chloroplast) [Akebia quinata]
Length = 2296
Score = 198 bits (504), Expect(4) = e-112
Identities = 100/106 (94%), Positives = 103/106 (97%)
Frame = +2
Query: 92 KFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIFR 271
KF+SVGSFT IFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLI+R
Sbjct: 37 KFDSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIYR 96
Query: 272 INNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
INNR MVERKNLYLMGLLPIPMNSIGPRN+TLEESF SSNINRLIV
Sbjct: 97 INNRNMVERKNLYLMGLLPIPMNSIGPRNDTLEESFGSSNINRLIV 142
Score = 126 bits (317), Expect(4) = e-112
Identities = 63/78 (80%), Positives = 64/78 (82%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVA 608
LPKGKKISESCFMDP+ESTWVLPI KKCIMPE IGKKRDSSCKISNETVA
Sbjct: 147 LPKGKKISESCFMDPKESTWVLPITKKCIMPESNWGSRWWRNRIGKKRDSSCKISNETVA 206
Query: 609 RIEISFKEKDNKYLEFLF 662
IEISFKEKD KYLEFLF
Sbjct: 207 GIEISFKEKDIKYLEFLF 224
Score = 82.4 bits (202), Expect(4) = e-112
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
F+SY DDPI KDHDWELFDR SPRKKRNIINLNSGQLFEIL K I
Sbjct: 224 FVSYTDDPIRKDHDWELFDRLSPRKKRNIINLNSGQLFEILVKHWI 269
Score = 73.2 bits (178), Expect(4) = e-112
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = +1
Query: 796 CYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
CYLMS FH+KRPI+ EGFFKQQGAE+TIQSN IEHV HL + N +SL
Sbjct: 270 CYLMSAFHEKRPIEVEGFFKQQGAESTIQSNDIEHVSHLFARNTCGISL 318
>ref|YP_009234430.1| Ycf2 (chloroplast) [Akebia trifoliata]
ref|YP_009234447.1| Ycf2 (chloroplast) [Akebia trifoliata]
gb|AMD08148.1| Ycf2 (chloroplast) [Akebia trifoliata]
gb|AMD08165.1| Ycf2 (chloroplast) [Akebia trifoliata]
Length = 2296
Score = 198 bits (504), Expect(4) = e-112
Identities = 100/106 (94%), Positives = 103/106 (97%)
Frame = +2
Query: 92 KFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIFR 271
KF+SVGSFT IFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLI+R
Sbjct: 37 KFDSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIYR 96
Query: 272 INNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
INNR MVERKNLYLMGLLPIPMNSIGPRN+TLEESF SSNINRLIV
Sbjct: 97 INNRNMVERKNLYLMGLLPIPMNSIGPRNDTLEESFGSSNINRLIV 142
Score = 126 bits (317), Expect(4) = e-112
Identities = 63/78 (80%), Positives = 64/78 (82%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVA 608
LPKGKKISESCFMDP+ESTWVLPI KKCIMPE IGKKRDSSCKISNETVA
Sbjct: 147 LPKGKKISESCFMDPKESTWVLPITKKCIMPESNWGSRWWRNRIGKKRDSSCKISNETVA 206
Query: 609 RIEISFKEKDNKYLEFLF 662
IEISFKEKD KYLEFLF
Sbjct: 207 GIEISFKEKDIKYLEFLF 224
Score = 82.4 bits (202), Expect(4) = e-112
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
F+SY DDPI KDHDWELFDR SPRKKRNIINLNSGQLFEIL K I
Sbjct: 224 FVSYTDDPIRKDHDWELFDRLSPRKKRNIINLNSGQLFEILVKHWI 269
Score = 73.2 bits (178), Expect(4) = e-112
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = +1
Query: 796 CYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
CYLMS FH+KRPI+ EGFFKQQGAE+TIQSN IEHV HL + N +SL
Sbjct: 270 CYLMSAFHEKRPIEVEGFFKQQGAESTIQSNDIEHVSHLFARNTCGISL 318
>ref|YP_009428839.1| Ycf2 (chloroplast) [Decaisnea insignis]
ref|YP_009428856.1| Ycf2 (chloroplast) [Decaisnea insignis]
gb|ARX79366.1| Ycf2 (chloroplast) [Decaisnea insignis]
gb|ARX79383.1| Ycf2 (chloroplast) [Decaisnea insignis]
Length = 2297
Score = 197 bits (501), Expect(4) = e-112
Identities = 99/106 (93%), Positives = 103/106 (97%)
Frame = +2
Query: 92 KFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIFR 271
KF+SVGSFT IFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVV+LVVAVLI+R
Sbjct: 37 KFDSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVVLVVAVLIYR 96
Query: 272 INNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
INNR MVERKNLYLMGLLPIPMNSIGPRN+TLEESF SSNINRLIV
Sbjct: 97 INNRNMVERKNLYLMGLLPIPMNSIGPRNDTLEESFGSSNINRLIV 142
Score = 122 bits (305), Expect(4) = e-112
Identities = 63/79 (79%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPE-XXXXXXXXXXXIGKKRDSSCKISNETV 605
LPKGKKISESCFMDP+ESTWVLPI KKCIMPE IGKKRDSSCKISNETV
Sbjct: 147 LPKGKKISESCFMDPKESTWVLPITKKCIMPESNWGSRWWWRNRIGKKRDSSCKISNETV 206
Query: 606 ARIEISFKEKDNKYLEFLF 662
A IEISFKEKD KYLEFLF
Sbjct: 207 AGIEISFKEKDIKYLEFLF 225
Score = 82.4 bits (202), Expect(4) = e-112
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
F+SY DDPI KDHDWELFDR SPRKKRNIINLNSGQLFEIL K I
Sbjct: 225 FVSYTDDPIRKDHDWELFDRLSPRKKRNIINLNSGQLFEILVKHWI 270
Score = 78.6 bits (192), Expect(4) = e-112
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +1
Query: 796 CYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
CYLMS F +KRPI+ EGFFKQQGAE+TIQSN IEHV HL S NKW +SL
Sbjct: 271 CYLMSAFREKRPIEVEGFFKQQGAESTIQSNDIEHVSHLFSRNKWGISL 319
>ref|YP_004940621.1| ycf2 gene product [Neottia nidus-avis]
ref|YP_004940627.1| ycf2 gene product [Neottia nidus-avis]
gb|AEJ88721.1| hypothetical protein RF2 (plastid) [Neottia nidus-avis]
gb|AEJ88727.1| hypothetical protein RF2 (plastid) [Neottia nidus-avis]
Length = 2227
Score = 193 bits (490), Expect(5) = e-112
Identities = 96/107 (89%), Positives = 101/107 (94%)
Frame = +2
Query: 89 IKFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIF 268
IKF+ VGSFT IFFHQERFMKLFDPRIWSILLSRDSQG+TSNRY TIKGV+LLVV VLI
Sbjct: 33 IKFDLVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGATSNRYLTIKGVLLLVVVVLIS 92
Query: 269 RINNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
RINNRKM+ERKNLYLMGLLPIPMNSIGP N+TLEESFWSSNINRLIV
Sbjct: 93 RINNRKMIERKNLYLMGLLPIPMNSIGPINDTLEESFWSSNINRLIV 139
Score = 117 bits (293), Expect(5) = e-112
Identities = 57/78 (73%), Positives = 62/78 (79%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVA 608
LPK KKI ESCFMDPQ+STWVLPI KKCIMPE IGKKRDSSC+I NETVA
Sbjct: 144 LPKRKKIYESCFMDPQDSTWVLPIKKKCIMPEYNRGSRWWRNRIGKKRDSSCQIYNETVA 203
Query: 609 RIEISFKEKDNKYLEFLF 662
IEISFK+KD+KYLEF+F
Sbjct: 204 GIEISFKDKDSKYLEFIF 221
Score = 82.4 bits (202), Expect(5) = e-112
Identities = 40/46 (86%), Positives = 40/46 (86%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
FLSY DDPI KD DWELFDR SP KKRNIINLNS QLFEILGKDLI
Sbjct: 221 FLSYTDDPIRKDPDWELFDRLSPSKKRNIINLNSVQLFEILGKDLI 266
Score = 77.8 bits (190), Expect(5) = e-112
Identities = 38/55 (69%), Positives = 43/55 (78%)
Frame = +1
Query: 778 LRERLDCYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
L + L CYLMS FH+KRPI+ FFKQQGA AT+QSN IEHVFHL S NKW +SL
Sbjct: 261 LGKDLICYLMSAFHEKRPIQGGSFFKQQGAGATMQSNDIEHVFHLFSRNKWGISL 315
Score = 30.0 bits (66), Expect(5) = e-112
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 34 MTRYQFKSWIVELREILRD 90
M R+Q K WI ELRE+LR+
Sbjct: 1 MRRHQLKFWIFELREVLRE 19
>ref|YP_009443816.1| hypothetical chloroplast RF2 (chloroplast) [Aconitum sinomontanum]
gb|ATU07016.1| hypothetical chloroplast RF2 (chloroplast) [Aconitum sinomontanum]
Length = 2153
Score = 196 bits (499), Expect(5) = e-112
Identities = 99/106 (93%), Positives = 102/106 (96%)
Frame = +2
Query: 92 KFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIFR 271
KF+SVGSFT IFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLL VAVLI+R
Sbjct: 37 KFDSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLAVAVLIYR 96
Query: 272 INNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
INNR MVERKNLYL+GLLPIPMNSIGPRNETLEESF SSNINRLIV
Sbjct: 97 INNRNMVERKNLYLVGLLPIPMNSIGPRNETLEESFGSSNINRLIV 142
Score = 118 bits (296), Expect(5) = e-112
Identities = 60/78 (76%), Positives = 61/78 (78%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVA 608
LPKGKKISESCFMDP+ESTWVLPI KKCIMPE IGKKRD SCKISNETVA
Sbjct: 147 LPKGKKISESCFMDPKESTWVLPITKKCIMPESNWGSRWWRNRIGKKRDYSCKISNETVA 206
Query: 609 RIEISFKEKDNKYLEFLF 662
IEISFKEKD KYLE F
Sbjct: 207 GIEISFKEKDIKYLESPF 224
Score = 77.0 bits (188), Expect(5) = e-112
Identities = 37/46 (80%), Positives = 38/46 (82%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
F+SY DDPI KDHDWELFDR SPRKKRNI NLNSGQL EIL K I
Sbjct: 224 FVSYTDDPIRKDHDWELFDRLSPRKKRNISNLNSGQLCEILVKHWI 269
Score = 75.9 bits (185), Expect(5) = e-112
Identities = 36/49 (73%), Positives = 40/49 (81%)
Frame = +1
Query: 796 CYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
CYLMS F +KRPI+ EGFFKQQGA +TIQSN IEHV HL S NKW +SL
Sbjct: 270 CYLMSAFREKRPIEVEGFFKQQGAGSTIQSNDIEHVSHLLSRNKWGISL 318
Score = 32.0 bits (71), Expect(5) = e-112
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +1
Query: 28 ESMTRYQFKSWIVELREILRD 90
E++ R+ KSWI+ELREILR+
Sbjct: 4 EAVKRHPLKSWILELREILRE 24
>ref|YP_009443652.1| hypothetical chloroplast RF2 (chloroplast) [Aconitum angustius]
ref|YP_009443734.1| hypothetical chloroplast RF2 (chloroplast) [Aconitum finetianum]
gb|ATU06852.1| hypothetical chloroplast RF2 (chloroplast) [Aconitum angustius]
gb|ATU06934.1| hypothetical chloroplast RF2 (chloroplast) [Aconitum finetianum]
gb|AUB29915.1| hypothetical chloroplast RF2 (chloroplast) [Aconitum reclinatum]
gb|AUB29933.1| hypothetical chloroplast RF2 (chloroplast) [Aconitum reclinatum]
Length = 2153
Score = 196 bits (499), Expect(5) = e-112
Identities = 99/106 (93%), Positives = 102/106 (96%)
Frame = +2
Query: 92 KFNSVGSFTPIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLVVAVLIFR 271
KF+SVGSFT IFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLL VAVLI+R
Sbjct: 37 KFDSVGSFTHIFFHQERFMKLFDPRIWSILLSRDSQGSTSNRYFTIKGVVLLAVAVLIYR 96
Query: 272 INNRKMVERKNLYLMGLLPIPMNSIGPRNETLEESFWSSNINRLIV 409
INNR MVERKNLYL+GLLPIPMNSIGPRNETLEESF SSNINRLIV
Sbjct: 97 INNRNMVERKNLYLVGLLPIPMNSIGPRNETLEESFGSSNINRLIV 142
Score = 118 bits (296), Expect(5) = e-112
Identities = 60/78 (76%), Positives = 61/78 (78%)
Frame = +3
Query: 429 LPKGKKISESCFMDPQESTWVLPINKKCIMPEXXXXXXXXXXXIGKKRDSSCKISNETVA 608
LPKGKKISESCFMDP+ESTWVLPI KKCIMPE IGKKRD SCKISNETVA
Sbjct: 147 LPKGKKISESCFMDPKESTWVLPITKKCIMPESNWGSRWWRNRIGKKRDYSCKISNETVA 206
Query: 609 RIEISFKEKDNKYLEFLF 662
IEISFKEKD KYLE F
Sbjct: 207 GIEISFKEKDIKYLESPF 224
Score = 77.0 bits (188), Expect(5) = e-112
Identities = 37/46 (80%), Positives = 38/46 (82%)
Frame = +2
Query: 659 FLSYMDDPIYKDHDWELFDRFSPRKKRNIINLNSGQLFEILGKDLI 796
F+SY DDPI KDHDWELFDR SPRKKRNI NLNSGQL EIL K I
Sbjct: 224 FVSYTDDPIRKDHDWELFDRLSPRKKRNISNLNSGQLCEILVKHWI 269
Score = 75.9 bits (185), Expect(5) = e-112
Identities = 36/49 (73%), Positives = 40/49 (81%)
Frame = +1
Query: 796 CYLMSIFHKKRPIKEEGFFKQQGAEATIQSNGIEHVFHLSSTNKWILSL 942
CYLMS F +KRPI+ EGFFKQQGA +TIQSN IEHV HL S NKW +SL
Sbjct: 270 CYLMSAFREKRPIEVEGFFKQQGAGSTIQSNDIEHVSHLLSRNKWGISL 318
Score = 32.0 bits (71), Expect(5) = e-112
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +1
Query: 28 ESMTRYQFKSWIVELREILRD 90
E++ R+ KSWI+ELREILR+
Sbjct: 4 EAVKRHPLKSWILELREILRE 24