BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00006034
         (886 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009397520.1| PREDICTED: RNA polymerase sigma factor sigA ...   419   e-142
ref|XP_009382828.1| PREDICTED: RNA polymerase sigma factor sigA-...   403   e-136
ref|XP_008808794.1| PREDICTED: RNA polymerase sigma factor sigA ...   337   e-110
gb|OAY70832.1| RNA polymerase sigma factor sigA [Ananas comosus]      328   e-106
ref|XP_020114873.1| RNA polymerase sigma factor sigA isoform X3 ...   327   e-106
ref|XP_020114872.1| RNA polymerase sigma factor sigA isoform X2 ...   327   e-106
ref|XP_020114871.1| RNA polymerase sigma factor sigA isoform X1 ...   327   e-106
ref|XP_010910228.1| PREDICTED: RNA polymerase sigma factor sigA ...   324   e-105
ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-...   323   e-104
ref|XP_020244786.1| RNA polymerase sigma factor sigA [Asparagus ...   322   e-104
gb|OVA18378.1| RNA polymerase sigma-70 [Macleaya cordata]             322   e-104
ref|XP_021656961.1| RNA polymerase sigma factor sigA-like isofor...   316   e-101
ref|XP_021656963.1| RNA polymerase sigma factor sigA-like isofor...   316   e-101
gb|ONK58865.1| uncharacterized protein A4U43_C08F530 [Asparagus ...   310   3e-99
gb|PKA46184.1| RNA polymerase sigma factor sigA [Apostasia shenz...   309   3e-99
ref|XP_021624392.1| RNA polymerase sigma factor sigA-like [Manih...   308   1e-98
ref|XP_021673261.1| RNA polymerase sigma factor sigA-like isofor...   306   1e-98
ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-...   307   4e-98
gb|EEF38395.1| RNA polymerase sigma factor rpoD, putative [Ricin...   306   4e-98
ref|XP_021673258.1| RNA polymerase sigma factor sigA-like isofor...   306   4e-98

>ref|XP_009397520.1| PREDICTED: RNA polymerase sigma factor sigA [Musa acuminata subsp.
           malaccensis]
 ref|XP_009397527.1| PREDICTED: RNA polymerase sigma factor sigA [Musa acuminata subsp.
           malaccensis]
 ref|XP_009397536.1| PREDICTED: RNA polymerase sigma factor sigA [Musa acuminata subsp.
           malaccensis]
 ref|XP_009397544.1| PREDICTED: RNA polymerase sigma factor sigA [Musa acuminata subsp.
           malaccensis]
          Length = 498

 Score =  419 bits (1076), Expect = e-142
 Identities = 215/298 (72%), Positives = 250/298 (83%), Gaps = 3/298 (1%)
 Frame = -2

Query: 885 LFATADKGLPPFSVAS-KCVIVSQKTSQFGLNVPPTRHKQAIKALRE--NTLAPSTSETM 715
           LF+  D G  PFS  S KC IV++K+S FG NVPPTRH   IKALRE  NT APSTS+T 
Sbjct: 30  LFSVPDHGSLPFSGGSTKCTIVAKKSSHFGSNVPPTRHIPTIKALRERVNTSAPSTSDTW 89

Query: 714 AEGSELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGKIHQMPQITGSGISARDRRKI 535
           +E  +LESSLE+++LLQKS+LEKQWELP +QMT V +P    QMP+IT SGISAR+RR I
Sbjct: 90  SERPDLESSLEVLILLQKSMLEKQWELPFTQMTTVVAPENSCQMPEITRSGISARERRTI 149

Query: 534 SRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTHAEVVNLSKKIR 355
           S RKCF HK N+ P+SRVKQLH S+S ELLK D+SGY+RG VSE LLTHAEV NLSK I+
Sbjct: 150 SSRKCFSHKANLVPSSRVKQLHPSVSRELLKSDISGYVRGTVSENLLTHAEVANLSKTIK 209

Query: 354 AGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREKLAMNNVRLVMS 175
           AGI ++E R+KL++KLGF+PTD+ LA+SL MSRAEL +KMIE+SLAREKLAM+NVRLVMS
Sbjct: 210 AGIHIQEQRAKLQDKLGFEPTDRQLASSLRMSRAELHTKMIESSLAREKLAMSNVRLVMS 269

Query: 174 IAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVTRALFKNS 1
           IAQKYDN+G  M DL+QAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGV+RALFKNS
Sbjct: 270 IAQKYDNLGAEMTDLIQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALFKNS 327


>ref|XP_009382828.1| PREDICTED: RNA polymerase sigma factor sigA-like [Musa acuminata
           subsp. malaccensis]
          Length = 491

 Score =  403 bits (1035), Expect = e-136
 Identities = 211/298 (70%), Positives = 245/298 (82%), Gaps = 3/298 (1%)
 Frame = -2

Query: 885 LFATADKGLPPFSVAS-KCVIVSQKTSQFGLNVPPTRHKQAIKALREN--TLAPSTSETM 715
           LF   D+   PF  AS K V+V+QK S F  N PPTRH   IKAL+E+  TLAPS ++  
Sbjct: 30  LFPILDQTTLPFPTASTKSVVVAQKPSPFRPNAPPTRHVPIIKALKEHVHTLAPSPTD-- 87

Query: 714 AEGSELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGKIHQMPQITGSGISARDRRKI 535
                LESSLE ++LLQKS+LEKQWELP +QMT VA+PG   ++P+I  SGISAR+RR I
Sbjct: 88  -----LESSLEALILLQKSMLEKQWELPFTQMTTVAAPGNGCRVPEIARSGISARERRMI 142

Query: 534 SRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTHAEVVNLSKKIR 355
           SRRKC GH+D + PASRV+QL S +SPELL  D SGY+RG VSE LLTHAEVVNLSKKIR
Sbjct: 143 SRRKCIGHRDAMAPASRVRQLRSCVSPELLNSDASGYVRGTVSESLLTHAEVVNLSKKIR 202

Query: 354 AGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREKLAMNNVRLVMS 175
           AG+R+EEHRS+LKEK+G++PTDK LA+SL MSRAEL +KMIE SLAREKLAM+NVRLVMS
Sbjct: 203 AGMRVEEHRSRLKEKMGYEPTDKQLASSLRMSRAELHTKMIECSLAREKLAMSNVRLVMS 262

Query: 174 IAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVTRALFKNS 1
           IAQKYDNMGT+MADL+Q GLIGLLRGIEKFD+SKGF+ISTYVYWWIRQGVTR LFKNS
Sbjct: 263 IAQKYDNMGTAMADLIQGGLIGLLRGIEKFDASKGFKISTYVYWWIRQGVTRTLFKNS 320


>ref|XP_008808794.1| PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
 ref|XP_008808795.1| PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
 ref|XP_008808796.1| PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
 ref|XP_008808797.1| PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
          Length = 508

 Score =  337 bits (863), Expect = e-110
 Identities = 184/309 (59%), Positives = 229/309 (74%), Gaps = 14/309 (4%)
 Frame = -2

Query: 885 LFATADKGLPPFSVAS-KCVIVSQKTSQFGLNVPPTRHKQAIKALREN--TLAPSTSET- 718
           LFA  D G   FS +S K  I ++++S FG N+P  RH QAIKAL+E+  T A ST++  
Sbjct: 29  LFAVPDHGSMQFSTSSTKNTIAAKRSSNFGTNIPSNRHSQAIKALKEHVDTAALSTADAW 88

Query: 717 ------MAEG-SELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGKIHQMPQITGSGI 559
                 + +G S+LE SLE+++LLQKS+LEKQW+LP  Q+  V  P +  +  ++  SGI
Sbjct: 89  FRRPDPLEDGESDLEYSLEVLILLQKSMLEKQWKLPFEQIKTVDDPRESCKKTEVIRSGI 148

Query: 558 SARDRRKISRRKCFGHKDNVPP---ASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTH 388
           SAR RR ++RR+CF     + P       K+L S++SPELL+  V GY+RG VSE LLTH
Sbjct: 149 SARKRRTVTRRRCFNRSAYMEPFNGGEEGKELRSTVSPELLQTRVRGYVRGTVSENLLTH 208

Query: 387 AEVVNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREK 208
           AEVV+LS+KIRAG+ LEE R KLKEKLGF+P+DK LA+ L MS AEL SK+ E SLAREK
Sbjct: 209 AEVVHLSRKIRAGLSLEEKRMKLKEKLGFEPSDKQLASFLRMSHAELHSKLTECSLAREK 268

Query: 207 LAMNNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQG 28
           LAM+NVRLVMSIAQKYDN+G  MADL+Q GLIGLLRGIEKFDSSKG +ISTYVYWWIRQG
Sbjct: 269 LAMSNVRLVMSIAQKYDNLGAEMADLIQGGLIGLLRGIEKFDSSKGCKISTYVYWWIRQG 328

Query: 27  VTRALFKNS 1
           V+RAL +NS
Sbjct: 329 VSRALVENS 337


>gb|OAY70832.1| RNA polymerase sigma factor sigA [Ananas comosus]
          Length = 501

 Score =  328 bits (841), Expect = e-106
 Identities = 177/306 (57%), Positives = 222/306 (72%), Gaps = 11/306 (3%)
 Frame = -2

Query: 885 LFATADKGLPPFS-VASKCVIVSQKTSQFGLNVPPTRHKQAIKALRENTLAPSTSETMA- 712
           LF   D G   FS  ASK  I++QK+  FG N    R  +AIKAL+E+  + +TS T   
Sbjct: 30  LFGVPDHGPMQFSSAASKSAIIAQKSPNFGPNASSNRQMRAIKALKEHAHSAATSTTENW 89

Query: 711 ---------EGSELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGKIHQMPQITGSGI 559
                    +  +LE+SLE++VLLQKS+LEKQWELP  QM     P + +   ++T SG+
Sbjct: 90  LNTPEISPDDDPDLENSLEVLVLLQKSMLEKQWELPFDQMKTFTEPAEKNNKVEVTRSGV 149

Query: 558 SARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTHAEV 379
           SAR RR  +RR+      ++ P +R KQ+ S++SPELL+    GY++G VSE LLTHAEV
Sbjct: 150 SARQRRTDTRRRF-----SIMPLNRGKQIRSTVSPELLQARNRGYVKGMVSEDLLTHAEV 204

Query: 378 VNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREKLAM 199
           VNLSKKI+ G+ LEEHR+KLKEKLG +P+DK LA SL MSRAEL S++ E S AREKLAM
Sbjct: 205 VNLSKKIKDGLYLEEHRAKLKEKLGTEPSDKQLACSLRMSRAELHSRLFECSQAREKLAM 264

Query: 198 NNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVTR 19
           +N+RLV+SIAQKYDN+G  MADL+Q GLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGV+R
Sbjct: 265 SNIRLVISIAQKYDNLGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSR 324

Query: 18  ALFKNS 1
           AL +NS
Sbjct: 325 ALVENS 330


>ref|XP_020114873.1| RNA polymerase sigma factor sigA isoform X3 [Ananas comosus]
          Length = 466

 Score =  327 bits (837), Expect = e-106
 Identities = 176/306 (57%), Positives = 222/306 (72%), Gaps = 11/306 (3%)
 Frame = -2

Query: 885 LFATADKGLPPFS-VASKCVIVSQKTSQFGLNVPPTRHKQAIKALRENTLAPSTSETMA- 712
           LF   D G   FS  ASK  I++QK+  FG N    R  +AIKAL+E+  + +TS T   
Sbjct: 30  LFGVPDHGPMQFSSAASKSAIIAQKSPNFGPNASSNRQMRAIKALKEHAHSAATSTTENW 89

Query: 711 ---------EGSELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGKIHQMPQITGSGI 559
                    +  +LE+SLE++VLLQKS+LEKQWELP  QM     P + +   ++T SG+
Sbjct: 90  LNTPEISPDDDPDLENSLEVLVLLQKSMLEKQWELPFDQMKTFTEPAEKNNKVEVTRSGV 149

Query: 558 SARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTHAEV 379
           SAR RR  +RR+      ++ P +R KQ+ S++SPELL+    GY++G VSE LLTHAEV
Sbjct: 150 SARQRRTDTRRRF-----SIMPLNRGKQIRSTVSPELLQARNRGYVKGMVSEDLLTHAEV 204

Query: 378 VNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREKLAM 199
           VNLSKKI+ G+ L+EHR+KLKEKLG +P+DK LA SL MSRAEL S++ E S AREKLAM
Sbjct: 205 VNLSKKIKDGLYLKEHRAKLKEKLGTEPSDKQLACSLRMSRAELHSRLFECSQAREKLAM 264

Query: 198 NNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVTR 19
           +N+RLV+SIAQKYDN+G  MADL+Q GLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGV+R
Sbjct: 265 SNIRLVISIAQKYDNLGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSR 324

Query: 18  ALFKNS 1
           AL +NS
Sbjct: 325 ALVENS 330


>ref|XP_020114872.1| RNA polymerase sigma factor sigA isoform X2 [Ananas comosus]
          Length = 479

 Score =  327 bits (837), Expect = e-106
 Identities = 176/306 (57%), Positives = 222/306 (72%), Gaps = 11/306 (3%)
 Frame = -2

Query: 885 LFATADKGLPPFS-VASKCVIVSQKTSQFGLNVPPTRHKQAIKALRENTLAPSTSETMA- 712
           LF   D G   FS  ASK  I++QK+  FG N    R  +AIKAL+E+  + +TS T   
Sbjct: 30  LFGVPDHGPMQFSSAASKSAIIAQKSPNFGPNASSNRQMRAIKALKEHAHSAATSTTENW 89

Query: 711 ---------EGSELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGKIHQMPQITGSGI 559
                    +  +LE+SLE++VLLQKS+LEKQWELP  QM     P + +   ++T SG+
Sbjct: 90  LNTPEISPDDDPDLENSLEVLVLLQKSMLEKQWELPFDQMKTFTEPAEKNNKVEVTRSGV 149

Query: 558 SARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTHAEV 379
           SAR RR  +RR+      ++ P +R KQ+ S++SPELL+    GY++G VSE LLTHAEV
Sbjct: 150 SARQRRTDTRRRF-----SIMPLNRGKQIRSTVSPELLQARNRGYVKGMVSEDLLTHAEV 204

Query: 378 VNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREKLAM 199
           VNLSKKI+ G+ L+EHR+KLKEKLG +P+DK LA SL MSRAEL S++ E S AREKLAM
Sbjct: 205 VNLSKKIKDGLYLKEHRAKLKEKLGTEPSDKQLACSLRMSRAELHSRLFECSQAREKLAM 264

Query: 198 NNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVTR 19
           +N+RLV+SIAQKYDN+G  MADL+Q GLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGV+R
Sbjct: 265 SNIRLVISIAQKYDNLGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSR 324

Query: 18  ALFKNS 1
           AL +NS
Sbjct: 325 ALVENS 330


>ref|XP_020114871.1| RNA polymerase sigma factor sigA isoform X1 [Ananas comosus]
          Length = 501

 Score =  327 bits (837), Expect = e-106
 Identities = 176/306 (57%), Positives = 222/306 (72%), Gaps = 11/306 (3%)
 Frame = -2

Query: 885 LFATADKGLPPFS-VASKCVIVSQKTSQFGLNVPPTRHKQAIKALRENTLAPSTSETMA- 712
           LF   D G   FS  ASK  I++QK+  FG N    R  +AIKAL+E+  + +TS T   
Sbjct: 30  LFGVPDHGPMQFSSAASKSAIIAQKSPNFGPNASSNRQMRAIKALKEHAHSAATSTTENW 89

Query: 711 ---------EGSELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGKIHQMPQITGSGI 559
                    +  +LE+SLE++VLLQKS+LEKQWELP  QM     P + +   ++T SG+
Sbjct: 90  LNTPEISPDDDPDLENSLEVLVLLQKSMLEKQWELPFDQMKTFTEPAEKNNKVEVTRSGV 149

Query: 558 SARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTHAEV 379
           SAR RR  +RR+      ++ P +R KQ+ S++SPELL+    GY++G VSE LLTHAEV
Sbjct: 150 SARQRRTDTRRRF-----SIMPLNRGKQIRSTVSPELLQARNRGYVKGMVSEDLLTHAEV 204

Query: 378 VNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREKLAM 199
           VNLSKKI+ G+ L+EHR+KLKEKLG +P+DK LA SL MSRAEL S++ E S AREKLAM
Sbjct: 205 VNLSKKIKDGLYLKEHRAKLKEKLGTEPSDKQLACSLRMSRAELHSRLFECSQAREKLAM 264

Query: 198 NNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVTR 19
           +N+RLV+SIAQKYDN+G  MADL+Q GLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGV+R
Sbjct: 265 SNIRLVISIAQKYDNLGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSR 324

Query: 18  ALFKNS 1
           AL +NS
Sbjct: 325 ALVENS 330


>ref|XP_010910228.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910230.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910231.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910232.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910235.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910236.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910226.2| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_019703121.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_019703122.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_019703123.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
          Length = 508

 Score =  324 bits (830), Expect = e-105
 Identities = 181/309 (58%), Positives = 227/309 (73%), Gaps = 14/309 (4%)
 Frame = -2

Query: 885 LFATADKGLPPFSVAS-KCVIVSQKTSQFGLNVPPTRHKQAIKALREN--TLAPSTSET- 718
           LFA  D     FS AS K  I ++K+S F  N+   RH QAIKAL+E+  T A ST++T 
Sbjct: 29  LFAVPDHASMQFSTASTKNTIAAKKSSNFSTNIRSNRHSQAIKALKEHVDTSALSTADTW 88

Query: 717 ------MAEG-SELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGKIHQMPQITGSGI 559
                 + +G S+LE SLE+++LLQKS+LEKQ +LP  Q+  V  P +  +  ++  SGI
Sbjct: 89  FQRPDLLEDGESDLEYSLEVLLLLQKSMLEKQRKLPFEQIKTVDDPRESCKKTEVIRSGI 148

Query: 558 SARDRRKISRRKCFGHKDNVPPASRVKQ---LHSSISPELLKGDVSGYIRGAVSEKLLTH 388
           SAR RR I+R  CF     + P +RVK+   L S++SPELL+  V GY+RG +S+ LL+H
Sbjct: 149 SARKRRTITRMTCFNQNAYMEPLNRVKEGKELRSTVSPELLQMHVRGYVRGTISQNLLSH 208

Query: 387 AEVVNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREK 208
           AEVV+LS+KIRAG+ LEE+R KLKEKLGF+P+DK LA+ L MS AEL SK+ E SLAREK
Sbjct: 209 AEVVHLSRKIRAGLSLEENRMKLKEKLGFEPSDKQLASFLGMSNAELHSKLTECSLAREK 268

Query: 207 LAMNNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQG 28
           LAM+NVRLVMSIAQKYDN+G  MADL+Q GLIGLLRGIEKFDSSKG +ISTYVYWWIR G
Sbjct: 269 LAMSNVRLVMSIAQKYDNLGAEMADLIQGGLIGLLRGIEKFDSSKGCKISTYVYWWIRHG 328

Query: 27  VTRALFKNS 1
           V+RAL +NS
Sbjct: 329 VSRALVENS 337


>ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 506

 Score =  323 bits (827), Expect = e-104
 Identities = 177/308 (57%), Positives = 228/308 (74%), Gaps = 13/308 (4%)
 Frame = -2

Query: 885 LFATADKGLPPFSVAS-KCVIVSQKTSQFGLNVPPTRHKQAIKALRE--NTLA-PSTSET 718
           L +  D GL  +   S K VI+++K+S FG + P  +H Q+I+AL+E  NTL+ PST++ 
Sbjct: 29  LLSVYDHGLAQYQATSAKNVIIARKSSNFGDSFPSNQHIQSIRALKEHVNTLSTPSTADV 88

Query: 717 MAEGS--------ELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGK-IHQMPQITGS 565
             + S        +L+ S++ ++LLQK +LEKQW L   Q     +PG+  H+  Q+T S
Sbjct: 89  WLQSSGLLEEENTDLDYSVDALLLLQKFLLEKQWNLSFEQTITDGAPGEETHKKIQVTRS 148

Query: 564 GISARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTHA 385
           G+SAR RR  +RR C   K ++   ++ KQL S +SPELLK    GY++G +SE+LLTHA
Sbjct: 149 GVSARQRRTSTRRTCLSPKHSIMQPTKRKQLGSMVSPELLKSHY-GYVKGVISEELLTHA 207

Query: 384 EVVNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREKL 205
           EVV LSKKI+AG+ LEEH+ +LKE+LG DP+D+ LA+SL +SRAELQSK+IE SLAREKL
Sbjct: 208 EVVQLSKKIKAGLSLEEHKLRLKERLGCDPSDEQLASSLRISRAELQSKVIECSLAREKL 267

Query: 204 AMNNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGV 25
            M+NVRLVMSIAQKYDNMG  MADLVQ GLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGV
Sbjct: 268 TMSNVRLVMSIAQKYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGV 327

Query: 24  TRALFKNS 1
           +RAL +NS
Sbjct: 328 SRALVENS 335


>ref|XP_020244786.1| RNA polymerase sigma factor sigA [Asparagus officinalis]
 ref|XP_020244787.1| RNA polymerase sigma factor sigA [Asparagus officinalis]
          Length = 501

 Score =  322 bits (825), Expect = e-104
 Identities = 167/305 (54%), Positives = 226/305 (74%), Gaps = 11/305 (3%)
 Frame = -2

Query: 882 FATADKGLPPFSV-ASKCVIVSQKTSQFGLNVPPTRHKQAIKALRENT--LAPSTSETMA 712
           F   D G P FS   SK +I+++++S    +VP  RH  +IKA++E+T  ++P  ++  +
Sbjct: 26  FTFIDHGSPQFSAPTSKSIIIARRSSHPNTSVPSERHSVSIKAVKEHTDTISPIATDDWS 85

Query: 711 E--------GSELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGKIHQMPQITGSGIS 556
           +         S+++SSLE+ +LLQKS+LEKQW+L  +QM+   +PG+  +  ++  SGIS
Sbjct: 86  DLIEEEEDGDSDIKSSLEVFLLLQKSMLEKQWKLSFNQMSTATAPGETCRKTEVIRSGIS 145

Query: 555 ARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTHAEVV 376
           AR RR  +R K       V      KQL +++SPELL+  ++GY+RG VSE LLTH+EVV
Sbjct: 146 ARKRRTSTRTKSINQSSYVGIMEEGKQLRAAVSPELLQAKLTGYVRGTVSEDLLTHSEVV 205

Query: 375 NLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREKLAMN 196
           +LSKKI+AG+ LE+HR+K+K KLGF+P+DK LA+SL MS +EL+SK+ E SLAREKLAM+
Sbjct: 206 HLSKKIKAGLSLEDHRAKMKGKLGFEPSDKQLASSLRMSHSELRSKLTECSLAREKLAMS 265

Query: 195 NVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVTRA 16
           N+RLVMSIAQKYDN+G  MADL+Q GLIGL+RGIEKFDSSKGFRISTYVYWWIRQGV+R 
Sbjct: 266 NIRLVMSIAQKYDNLGAEMADLIQGGLIGLVRGIEKFDSSKGFRISTYVYWWIRQGVSRT 325

Query: 15  LFKNS 1
           L +NS
Sbjct: 326 LAENS 330


>gb|OVA18378.1| RNA polymerase sigma-70 [Macleaya cordata]
          Length = 506

 Score =  322 bits (824), Expect = e-104
 Identities = 178/307 (57%), Positives = 228/307 (74%), Gaps = 12/307 (3%)
 Frame = -2

Query: 885 LFATADKGLPPFSVAS-KCVIVSQKTSQFGLNVPPTRHKQAIKAL---RENTLAPSTSET 718
           LF+  D GL  + VAS K +I+++K+S FG N P  RH Q+I AL    E++  PST++ 
Sbjct: 30  LFSVHDHGLTQYQVASGKSLIIAKKSSDFGPNFPSNRHTQSINALIEHLESSSVPSTADG 89

Query: 717 M-------AEGSELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGKIH-QMPQITGSG 562
           +        E ++  SSLE ++LLQKS+LEKQW L   +   +  PG+   +  Q+  SG
Sbjct: 90  IWRSDFLEEEDNDSRSSLEAILLLQKSMLEKQWNLSFERKQTMIVPGEESCKNIQVARSG 149

Query: 561 ISARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTHAE 382
           ISAR RR  +R+K   H   +    R KQL S +SPELL+  + GY++G VSE+LLTHAE
Sbjct: 150 ISARQRRTSTRKKSLNHISPLMLLRR-KQLGSIVSPELLQNRLKGYVKGVVSEELLTHAE 208

Query: 381 VVNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREKLA 202
           VVNLSKKI+AG+ LE H+S+LKE+LG++P+++ LATSL +SRAELQ+K+IE SLAREKLA
Sbjct: 209 VVNLSKKIKAGLSLEGHKSRLKERLGYEPSNEQLATSLRISRAELQAKLIECSLAREKLA 268

Query: 201 MNNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVT 22
           M+NVRLVMSIAQKYDNMG  +ADLVQ GLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGV+
Sbjct: 269 MSNVRLVMSIAQKYDNMGVELADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS 328

Query: 21  RALFKNS 1
           RAL +NS
Sbjct: 329 RALMENS 335


>ref|XP_021656961.1| RNA polymerase sigma factor sigA-like isoform X1 [Hevea
           brasiliensis]
 ref|XP_021656962.1| RNA polymerase sigma factor sigA-like isoform X1 [Hevea
           brasiliensis]
          Length = 509

 Score =  316 bits (809), Expect = e-101
 Identities = 182/313 (58%), Positives = 230/313 (73%), Gaps = 18/313 (5%)
 Frame = -2

Query: 885 LFATADKGLPPFSVAS-KCVIVSQKTSQFGLNVPPT-RHKQAIKALREN---TLAPSTSE 721
           LF   D GL  + +AS K VIV++K+S +G + P + R+ Q+IKAL+E+     APST+ 
Sbjct: 30  LFNVNDNGLTHYQIASTKNVIVAKKSSNYGPSYPSSNRNTQSIKALKEHMDTASAPSTAA 89

Query: 720 TMAEG--------SELESSLEIMVLLQKSILEKQWELP-----SSQMTNVASPGKIHQMP 580
           T  +         S+L+ S+E ++LLQKS+LEKQW L      SS  TN  S  KI    
Sbjct: 90  TRFKTFHDIEEDISDLDYSVEALLLLQKSMLEKQWNLSFERTASSDSTNKKSQKKI---- 145

Query: 579 QITGSGISARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEK 400
            +T SG+SAR RR  +RRK      ++  AS  KQL S++SPELL+  + GY++G VSE+
Sbjct: 146 PVTCSGLSARQRRINTRRKNLSQSKSIVQASTFKQLKSAVSPELLQNRLKGYVKGVVSEE 205

Query: 399 LLTHAEVVNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASL 220
           LLTHAEVV LS+ I+AG+ +EEHRS+LKE+LG +P+D+ LATSL +SRAELQSK+I  SL
Sbjct: 206 LLTHAEVVCLSRIIKAGLSMEEHRSRLKERLGCEPSDEELATSLRISRAELQSKLIACSL 265

Query: 219 AREKLAMNNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWW 40
           AREKLAM+NVRLVMSIAQ+YDNMG  MADLVQ GLIGLLRGIEKFDSSKGF+ISTYVYWW
Sbjct: 266 AREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWW 325

Query: 39  IRQGVTRALFKNS 1
           IRQGV+RAL +NS
Sbjct: 326 IRQGVSRALVENS 338


>ref|XP_021656963.1| RNA polymerase sigma factor sigA-like isoform X2 [Hevea
           brasiliensis]
          Length = 579

 Score =  316 bits (809), Expect = e-101
 Identities = 182/313 (58%), Positives = 230/313 (73%), Gaps = 18/313 (5%)
 Frame = -2

Query: 885 LFATADKGLPPFSVAS-KCVIVSQKTSQFGLNVPPT-RHKQAIKALREN---TLAPSTSE 721
           LF   D GL  + +AS K VIV++K+S +G + P + R+ Q+IKAL+E+     APST+ 
Sbjct: 30  LFNVNDNGLTHYQIASTKNVIVAKKSSNYGPSYPSSNRNTQSIKALKEHMDTASAPSTAA 89

Query: 720 TMAEG--------SELESSLEIMVLLQKSILEKQWELP-----SSQMTNVASPGKIHQMP 580
           T  +         S+L+ S+E ++LLQKS+LEKQW L      SS  TN  S  KI    
Sbjct: 90  TRFKTFHDIEEDISDLDYSVEALLLLQKSMLEKQWNLSFERTASSDSTNKKSQKKI---- 145

Query: 579 QITGSGISARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEK 400
            +T SG+SAR RR  +RRK      ++  AS  KQL S++SPELL+  + GY++G VSE+
Sbjct: 146 PVTCSGLSARQRRINTRRKNLSQSKSIVQASTFKQLKSAVSPELLQNRLKGYVKGVVSEE 205

Query: 399 LLTHAEVVNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASL 220
           LLTHAEVV LS+ I+AG+ +EEHRS+LKE+LG +P+D+ LATSL +SRAELQSK+I  SL
Sbjct: 206 LLTHAEVVCLSRIIKAGLSMEEHRSRLKERLGCEPSDEELATSLRISRAELQSKLIACSL 265

Query: 219 AREKLAMNNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWW 40
           AREKLAM+NVRLVMSIAQ+YDNMG  MADLVQ GLIGLLRGIEKFDSSKGF+ISTYVYWW
Sbjct: 266 AREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWW 325

Query: 39  IRQGVTRALFKNS 1
           IRQGV+RAL +NS
Sbjct: 326 IRQGVSRALVENS 338


>gb|ONK58865.1| uncharacterized protein A4U43_C08F530 [Asparagus officinalis]
          Length = 521

 Score =  310 bits (794), Expect = 3e-99
 Identities = 167/325 (51%), Positives = 226/325 (69%), Gaps = 31/325 (9%)
 Frame = -2

Query: 882  FATADKGLPPFSV-ASKCVIVSQKTSQFGLNVPPTRHKQAIKALRENT--LAPSTSETMA 712
            F   D G P FS   SK +I+++++S    +VP  RH  +IKA++E+T  ++P  ++  +
Sbjct: 26   FTFIDHGSPQFSAPTSKSIIIARRSSHPNTSVPSERHSVSIKAVKEHTDTISPIATDDWS 85

Query: 711  E--------GSELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGKIHQMPQITGSGIS 556
            +         S+++SSLE+ +LLQKS+LEKQW+L  +QM+   +PG+  +  ++  SGIS
Sbjct: 86   DLIEEEEDGDSDIKSSLEVFLLLQKSMLEKQWKLSFNQMSTATAPGETCRKTEVIRSGIS 145

Query: 555  ARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTHAEVV 376
            AR RR  +R K       V      KQL +++SPELL+  ++GY+RG VSE LLTH+EVV
Sbjct: 146  ARKRRTSTRTKSINQSSYVGIMEEGKQLRAAVSPELLQAKLTGYVRGTVSEDLLTHSEVV 205

Query: 375  NLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREKLAMN 196
            +LSKKI+AG+ LE+HR+K+K KLGF+P+DK LA+SL MS +EL+SK+ E SLAREKLAM+
Sbjct: 206  HLSKKIKAGLSLEDHRAKMKGKLGFEPSDKQLASSLRMSHSELRSKLTECSLAREKLAMS 265

Query: 195  NVRLVMSIA--------------------QKYDNMGTSMADLVQAGLIGLLRGIEKFDSS 76
            N+RLVMSIA                    QKYDN+G  MADL+Q GLIGL+RGIEKFDSS
Sbjct: 266  NIRLVMSIAQKYDNLGAEMADNEQYSTFAQKYDNLGAEMADLIQGGLIGLVRGIEKFDSS 325

Query: 75   KGFRISTYVYWWIRQGVTRALFKNS 1
            KGFRISTYVYWWIRQGV+R L +NS
Sbjct: 326  KGFRISTYVYWWIRQGVSRTLAENS 350


>gb|PKA46184.1| RNA polymerase sigma factor sigA [Apostasia shenzhenica]
          Length = 503

 Score =  309 bits (792), Expect = 3e-99
 Identities = 170/305 (55%), Positives = 214/305 (70%), Gaps = 15/305 (4%)
 Frame = -2

Query: 873 ADKGLPPF------SVASKCVIVSQKTSQFGLNVPPTRHKQAIKALREN--TLAPSTSET 718
           ADK LP        S A+K V+ +QK S FG++    RH Q +KAL  +  T APST+  
Sbjct: 27  ADKCLPDHGPVQTSSAANKNVVYAQKPSHFGMDSSKNRHPQLVKALMAHVDTSAPSTTNN 86

Query: 717 MAEGS-------ELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGKIHQMPQITGSGI 559
             E S       ++ESSLE+++LLQKS+LEKQWEL       + SP K  +  ++T SGI
Sbjct: 87  WFENSNTSKNDNDIESSLEVLILLQKSMLEKQWELSFDHTRTITSPHKGSRKSEVTRSGI 146

Query: 558 SARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTHAEV 379
           SAR RR   RRK           +  KQ +S+++PELL+  +  Y+RG  ++ LL+HAEV
Sbjct: 147 SARQRRVDMRRKLSDQNAYEVSTNERKQHYSAVNPELLQTSLGSYVRGTPADALLSHAEV 206

Query: 378 VNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREKLAM 199
           V LSK ++ G+ LEE ++KLKE+LGF+P+DK LA+SL M+ AEL+SK+IE SLAREKLAM
Sbjct: 207 VRLSKNVKVGLSLEEQKTKLKERLGFEPSDKQLASSLKMTCAELRSKLIECSLAREKLAM 266

Query: 198 NNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVTR 19
           +NVRLVMSIAQKYDNMG  +ADLVQ GLIGLLRGIEKFDSSKG RISTYVYWWIRQGVTR
Sbjct: 267 SNVRLVMSIAQKYDNMGAEIADLVQGGLIGLLRGIEKFDSSKGCRISTYVYWWIRQGVTR 326

Query: 18  ALFKN 4
            L +N
Sbjct: 327 TLAEN 331


>ref|XP_021624392.1| RNA polymerase sigma factor sigA-like [Manihot esculenta]
 ref|XP_021624393.1| RNA polymerase sigma factor sigA-like [Manihot esculenta]
 gb|OAY41811.1| hypothetical protein MANES_09G130800 [Manihot esculenta]
 gb|OAY41812.1| hypothetical protein MANES_09G130800 [Manihot esculenta]
          Length = 509

 Score =  308 bits (789), Expect = 1e-98
 Identities = 178/313 (56%), Positives = 224/313 (71%), Gaps = 18/313 (5%)
 Frame = -2

Query: 885 LFATADKGLPPFSVAS-KCVIVSQKTSQFGLNVPPT-RHKQAIKALRENTLAPSTSETMA 712
           LF   D GL  + +AS K VI ++K+S +G   P + R+ Q+IKAL+E+    S+S T  
Sbjct: 30  LFNVNDHGLTHYQIASTKNVIGAKKSSNYGPTYPSSNRNTQSIKALKEHVDTASSSSTTE 89

Query: 711 -----------EGSELESSLEIMVLLQKSILEKQWELP-----SSQMTNVASPGKIHQMP 580
                      + S+L+ S+E ++LLQKS+LEKQW L      SS  TN  S  KI    
Sbjct: 90  TRFKTFHDIEEDISDLDYSVEALLLLQKSMLEKQWNLSFERTASSDSTNRKSEKKI---- 145

Query: 579 QITGSGISARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEK 400
            +T SG+SAR RR  +RRK  G       AS  KQL S++SPELL+  + GY++G VSE+
Sbjct: 146 PVTCSGLSARQRRINTRRKNLGQNKATVQASTFKQLQSAVSPELLQNRLKGYVKGVVSEE 205

Query: 399 LLTHAEVVNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASL 220
           LLTHAEVV LS+ I+AG+ LE+H+S+LKE+LG +P+D+ LATSL +SRAELQSK+I  SL
Sbjct: 206 LLTHAEVVRLSRIIKAGLSLEDHKSRLKERLGCEPSDEQLATSLRISRAELQSKLIACSL 265

Query: 219 AREKLAMNNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWW 40
           AREKLAM+NVRLVMSIAQ+YD+MG  MADLVQ GLIGLLRGIEKFDSSKGF+ISTYVYWW
Sbjct: 266 AREKLAMSNVRLVMSIAQRYDHMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWW 325

Query: 39  IRQGVTRALFKNS 1
           IRQGV+RAL  NS
Sbjct: 326 IRQGVSRALVDNS 338


>ref|XP_021673261.1| RNA polymerase sigma factor sigA-like isoform X3 [Hevea
           brasiliensis]
          Length = 472

 Score =  306 bits (785), Expect = 1e-98
 Identities = 173/307 (56%), Positives = 219/307 (71%), Gaps = 13/307 (4%)
 Frame = -2

Query: 882 FATADKGLPPFSVAS-KCVIVSQKTSQFGLNVPPT-RHKQAIKALRENTLAPSTSETMA- 712
           F   D GL  + +AS K VIV++K+S +G + P + R+ Q+IKAL+E+    S S T   
Sbjct: 32  FNVNDYGLTHYQIASTKNVIVAKKSSNYGSSSPSSSRNTQSIKALKEHVDTASASSTATW 91

Query: 711 ---------EGSELESSLEIMVLLQKSILEKQWELPSSQMTNVASPG-KIHQMPQITGSG 562
                    + S+L  S+E ++LLQKS LEKQW L   + T+  SP  K  +   IT SG
Sbjct: 92  FKTFNDTEEDSSDLYYSVEALLLLQKSFLEKQWHLSFERATSCDSPSRKSKKKIPITCSG 151

Query: 561 ISARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTHAE 382
           +SAR RR  +RRK      ++  A    QL SS+SPELL+  + GY++G VSE+LLTH E
Sbjct: 152 LSARQRRINTRRKNLSQSKSIVQACTFMQLKSSVSPELLQNCLKGYVKGVVSEELLTHGE 211

Query: 381 VVNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREKLA 202
           VV LS+ I+AG+ +EEH+S+LKE+LG  P+D+ LATSL +S AELQSK+I  SLAREKLA
Sbjct: 212 VVRLSRIIKAGLSMEEHKSRLKERLGCGPSDQQLATSLRISHAELQSKLIACSLAREKLA 271

Query: 201 MNNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVT 22
           M+NVRLVMSIAQ+YDNMG  MADLVQ GLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGV+
Sbjct: 272 MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS 331

Query: 21  RALFKNS 1
           RAL +NS
Sbjct: 332 RALVENS 338


>ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
 ref|XP_010275190.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
 ref|XP_010275191.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 516

 Score =  307 bits (786), Expect = 4e-98
 Identities = 170/307 (55%), Positives = 221/307 (71%), Gaps = 12/307 (3%)
 Frame = -2

Query: 885 LFATADKGLPPFSVA-SKCVIVSQKTSQFGLNVPPTRHKQAIKALRE--NTLAPST---- 727
           L +  D GL  +  A SK V++++K+S F  +    RH Q+IKAL+E  NT + ST    
Sbjct: 39  LASVYDHGLAQYQTAPSKSVVIAKKSSNFDHDFASNRHNQSIKALKEHLNTFSTSTEDMW 98

Query: 726 ---SETMAEG-SELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGK-IHQMPQITGSG 562
              S+ + EG S+L+ SLE ++LLQKS+LEKQW L   +     +P +   +  Q+T SG
Sbjct: 99  LQTSDHLEEGNSDLDYSLEALLLLQKSLLEKQWNLSFEKSMRKGAPKEETRKKIQVTRSG 158

Query: 561 ISARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTHAE 382
           +SAR RR  +R+K      ++   +R + L S +S ELL+  + GY++G +SE+LLTH+E
Sbjct: 159 VSARQRRTNTRKKYLNTDSSMMQTTRRRHLGSMVSEELLQSRLKGYVKGVISEELLTHSE 218

Query: 381 VVNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREKLA 202
           VV LSKKI+ GI LEEH+ +LKE+LG +P+D+ LATSL +SRAELQ KMIE SLAREK+A
Sbjct: 219 VVQLSKKIKVGISLEEHKMRLKERLGCEPSDEQLATSLRISRAELQMKMIECSLAREKIA 278

Query: 201 MNNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVT 22
           M+NVRLVMSIA KYDNMG  MADLVQ GLIGLLRGIEKFDSSKG +ISTYVYWWIRQGV+
Sbjct: 279 MSNVRLVMSIAHKYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGCKISTYVYWWIRQGVS 338

Query: 21  RALFKNS 1
           RAL +NS
Sbjct: 339 RALVENS 345


>gb|EEF38395.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
          Length = 508

 Score =  306 bits (785), Expect = 4e-98
 Identities = 173/309 (55%), Positives = 224/309 (72%), Gaps = 14/309 (4%)
 Frame = -2

Query: 885 LFATADKGLPPFSVAS-KCVIVSQKTSQFGLNVPPT-RHKQAIKALRENT---LAPSTSE 721
           L +  + GL  + + S K +IV++K+S +G + P + R+ Q+IKAL+E+     APST+ 
Sbjct: 29  LSSANEHGLTHYQITSTKTLIVAKKSSNYGPSFPSSNRNTQSIKALKEHVDTASAPSTAA 88

Query: 720 TM--------AEGSELESSLEIMVLLQKSILEKQWELPSSQMTNVASPGKIHQMP-QITG 568
           T          E S+L+ S+E ++LLQKS+LEKQW L   +  +  SP +  Q    +T 
Sbjct: 89  TQFKTFNDMEEESSDLDYSVEALLLLQKSMLEKQWNLSFERTDSSDSPSRKSQKKIPVTC 148

Query: 567 SGISARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTH 388
           SG+SAR RR   RRK          A+  KQL S++SPELL+  + GY++G VSE+LL+H
Sbjct: 149 SGVSARQRRINIRRKNLSQSKFTVQANVFKQLKSAVSPELLQNRLKGYVKGVVSEELLSH 208

Query: 387 AEVVNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREK 208
           AEVV LS+ I+AG+ LE+H+S+LKE+LG DP+D+ +ATSL +SRAELQSK I  SLAREK
Sbjct: 209 AEVVRLSRIIKAGLSLEDHKSRLKERLGCDPSDEQVATSLKISRAELQSKSIACSLAREK 268

Query: 207 LAMNNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQG 28
           LAM+NVRLVMSIAQ+YDNMG  MADLVQ GLIGLLRGIEKFDSSKGFRISTYVYWWIRQG
Sbjct: 269 LAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQG 328

Query: 27  VTRALFKNS 1
           V+RAL +NS
Sbjct: 329 VSRALVENS 337


>ref|XP_021673258.1| RNA polymerase sigma factor sigA-like isoform X1 [Hevea
           brasiliensis]
 ref|XP_021673259.1| RNA polymerase sigma factor sigA-like isoform X1 [Hevea
           brasiliensis]
 ref|XP_021673260.1| RNA polymerase sigma factor sigA-like isoform X2 [Hevea
           brasiliensis]
          Length = 509

 Score =  306 bits (785), Expect = 4e-98
 Identities = 173/307 (56%), Positives = 219/307 (71%), Gaps = 13/307 (4%)
 Frame = -2

Query: 882 FATADKGLPPFSVAS-KCVIVSQKTSQFGLNVPPT-RHKQAIKALRENTLAPSTSETMA- 712
           F   D GL  + +AS K VIV++K+S +G + P + R+ Q+IKAL+E+    S S T   
Sbjct: 32  FNVNDYGLTHYQIASTKNVIVAKKSSNYGSSSPSSSRNTQSIKALKEHVDTASASSTATW 91

Query: 711 ---------EGSELESSLEIMVLLQKSILEKQWELPSSQMTNVASPG-KIHQMPQITGSG 562
                    + S+L  S+E ++LLQKS LEKQW L   + T+  SP  K  +   IT SG
Sbjct: 92  FKTFNDTEEDSSDLYYSVEALLLLQKSFLEKQWHLSFERATSCDSPSRKSKKKIPITCSG 151

Query: 561 ISARDRRKISRRKCFGHKDNVPPASRVKQLHSSISPELLKGDVSGYIRGAVSEKLLTHAE 382
           +SAR RR  +RRK      ++  A    QL SS+SPELL+  + GY++G VSE+LLTH E
Sbjct: 152 LSARQRRINTRRKNLSQSKSIVQACTFMQLKSSVSPELLQNCLKGYVKGVVSEELLTHGE 211

Query: 381 VVNLSKKIRAGIRLEEHRSKLKEKLGFDPTDKHLATSLSMSRAELQSKMIEASLAREKLA 202
           VV LS+ I+AG+ +EEH+S+LKE+LG  P+D+ LATSL +S AELQSK+I  SLAREKLA
Sbjct: 212 VVRLSRIIKAGLSMEEHKSRLKERLGCGPSDQQLATSLRISHAELQSKLIACSLAREKLA 271

Query: 201 MNNVRLVMSIAQKYDNMGTSMADLVQAGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVT 22
           M+NVRLVMSIAQ+YDNMG  MADLVQ GLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGV+
Sbjct: 272 MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS 331

Query: 21  RALFKNS 1
           RAL +NS
Sbjct: 332 RALVENS 338