BLASTX nr result

ID: Cheilocostus21_contig00005558 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00005558
         (723 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009380014.1| PREDICTED: BOI-related E3 ubiquitin-protein ...    74   9e-12
ref|XP_009404199.1| PREDICTED: probable BOI-related E3 ubiquitin...    59   2e-06

>ref|XP_009380014.1| PREDICTED: BOI-related E3 ubiquitin-protein ligase 1-like [Musa
           acuminata subsp. malaccensis]
          Length = 352

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 56/159 (35%), Positives = 77/159 (48%), Gaps = 23/159 (14%)
 Frame = +1

Query: 316 RARSSSLDELYAMQDPRNFQHLQSSNLGNGGAGMXXXXXXXXILNYAEGFGERHGAFTTN 495
           RARS +LD+   MQ+PR+   L  +NLG G            ILN A  F +R    T N
Sbjct: 19  RARSGALDDPLMMQEPRDLLQLHGNNLGTG-------EQQHQILNNAGVFSDRQSELTCN 71

Query: 496 QHVAQACQ-------------INPAISLLF--PNPSAMPAPANLAG--GSGFPQARLPQS 624
              A  C+              NPA+S LF  PN +A+P     A     G P +R  +S
Sbjct: 72  ---ASGCRKRSREEAMVLPGLHNPALSTLFRYPNATAVPVKPTAAQTFSVGLPHSRSIES 128

Query: 625 VGASTSGRRISEAHR------EIVSLIYRQNMELDNLIR 723
              STSGR +S +H       ++VSL+++QN E+D L+R
Sbjct: 129 GATSTSGRHVSSSHAAPPPPCDLVSLLFQQNTEIDALVR 167


>ref|XP_009404199.1| PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2
           isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 322

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
 Frame = +1

Query: 322 RSSSLDELYAMQDPRNFQHLQSSNLGNGGAGMXXXXXXXXILNYAEGFGERHGAFTTN-- 495
           R+ +LD++  MQDPR+   L    +G  G           ILN   GF  R   FT N  
Sbjct: 17  RNRALDDVQMMQDPRDLLQLHGGGIGGLGK------QEHQILNAGVGFSGRQSEFTCNAS 70

Query: 496 --------QHVAQACQINPAISLLFPNPSAMPAPANLAGGSGFPQARLPQSVGASTSGRR 651
                     +A     NPA+S L P P  +             Q+R  +S   STSGR 
Sbjct: 71  GSRKRAREDSMALPILHNPALSPLIPIPGVLL------------QSRSLESGATSTSGRH 118

Query: 652 ISEAH-----REIVSLIYRQNMELDNLIR 723
           +  +      R++VSL+ +QN+E+D L+R
Sbjct: 119 VPSSQAVSPVRDLVSLLLQQNLEIDALVR 147


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