BLASTX nr result

ID: Cheilocostus21_contig00005557 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00005557
         (500 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009380014.1| PREDICTED: BOI-related E3 ubiquitin-protein ...    75   1e-12
ref|XP_009404199.1| PREDICTED: probable BOI-related E3 ubiquitin...    62   3e-08

>ref|XP_009380014.1| PREDICTED: BOI-related E3 ubiquitin-protein ligase 1-like [Musa
           acuminata subsp. malaccensis]
          Length = 352

 Score = 74.7 bits (182), Expect = 1e-12
 Identities = 54/156 (34%), Positives = 73/156 (46%), Gaps = 20/156 (12%)
 Frame = +3

Query: 93  RARSSSLDELYAMQDPRNFQHLQSSNLGNGGAGMXXXXXXXXILNYAEGFGERHGEFTAN 272
           RARS +LD+   MQ+PR+   L  +NLG G            ILN A  F +R  E T N
Sbjct: 19  RARSGALDDPLMMQEPRDLLQLHGNNLGTG-------EQQHQILNNAGVFSDRQSELTCN 71

Query: 273 ----------QHMAQACQINPPISLLFPNPSAMPAPANLAGGSDF----PQARLPQSVGA 410
                     + M      NP +S LF  P+A   P        F    P +R  +S   
Sbjct: 72  ASGCRKRSREEAMVLPGLHNPALSTLFRYPNATAVPVKPTAAQTFSVGLPHSRSIESGAT 131

Query: 411 STSGRRVSEAHR------EIVSLMYRQNLELDNLIR 500
           STSGR VS +H       ++VSL+++QN E+D L+R
Sbjct: 132 STSGRHVSSSHAAPPPPCDLVSLLFQQNTEIDALVR 167


>ref|XP_009404199.1| PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2
           isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 322

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 49/149 (32%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
 Frame = +3

Query: 99  RSSSLDELYAMQDPRNFQHLQSSNLGNGGAGMXXXXXXXXILNYAEGFGERHGEFTAN-- 272
           R+ +LD++  MQDPR+   L    +G  G           ILN   GF  R  EFT N  
Sbjct: 17  RNRALDDVQMMQDPRDLLQLHGGGIGGLGK------QEHQILNAGVGFSGRQSEFTCNAS 70

Query: 273 --------QHMAQACQINPPISLLFPNPSAMPAPANLAGGSDFPQARLPQSVGASTSGRR 428
                     MA     NP +S L P P  +             Q+R  +S   STSGR 
Sbjct: 71  GSRKRAREDSMALPILHNPALSPLIPIPGVLL------------QSRSLESGATSTSGRH 118

Query: 429 VSEAH-----REIVSLMYRQNLELDNLIR 500
           V  +      R++VSL+ +QNLE+D L+R
Sbjct: 119 VPSSQAVSPVRDLVSLLLQQNLEIDALVR 147


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