BLASTX nr result
ID: Cheilocostus21_contig00004846
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00004846
(494 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDM87113.1| unnamed protein product [Triticum aestivum] 101 5e-25
ref|XP_009397683.1| PREDICTED: 40S ribosomal protein S28-like [M... 100 9e-25
ref|XP_009396924.1| PREDICTED: 40S ribosomal protein S28 [Musa a... 100 9e-25
ref|XP_020256600.1| 40S ribosomal protein S28 [Asparagus officin... 100 1e-24
ref|XP_010241388.1| PREDICTED: 40S ribosomal protein S28 [Nelumb... 100 1e-24
gb|OAY80870.1| 40S ribosomal protein S28, partial [Ananas comosus] 100 1e-24
gb|OUZ99539.1| Ribosomal protein S28e [Macleaya cordata] >gi|120... 99 2e-24
gb|EEC74585.1| hypothetical protein OsI_10164 [Oryza sativa Indi... 100 3e-24
gb|ACG31085.1| 40S ribosomal protein S28 [Zea mays] 99 3e-24
ref|NP_001147283.1| 40S ribosomal protein S28 [Zea mays] >gi|226... 99 3e-24
gb|ONL94056.1| 40S ribosomal protein S28 [Zea mays] 99 4e-24
ref|XP_020104262.1| 40S ribosomal protein S28-like isoform X1 [A... 99 4e-24
dbj|BAT10815.1| Os10g0411700, partial [Oryza sativa Japonica Group] 99 4e-24
gb|OAY82565.1| 40S ribosomal protein S28, partial [Ananas comosus] 99 5e-24
gb|OAY82556.1| 40S ribosomal protein S28, partial [Ananas comosus] 99 5e-24
gb|KMZ73331.1| 40S ribosomal protein S28 [Zostera marina] 98 5e-24
ref|XP_008789172.1| PREDICTED: 40S ribosomal protein S28 [Phoeni... 98 5e-24
ref|XP_010233649.1| PREDICTED: 40S ribosomal protein S28 [Brachy... 98 5e-24
gb|ONK74785.1| uncharacterized protein A4U43_C03F10120 [Asparagu... 100 6e-24
gb|AAP80664.1|AF479045_1 S28 ribosomal protein, partial [Triticu... 99 6e-24
>emb|CDM87113.1| unnamed protein product [Triticum aestivum]
Length = 86
Score = 101 bits (251), Expect = 5e-25
Identities = 54/72 (75%), Positives = 58/72 (80%)
Frame = -1
Query: 467 LILQRETVCGSISFLQ*TLARMDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIM 288
++L + C S L L MD+Q KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIM
Sbjct: 1 MLLVSDGFCLMQSILCDGLCSMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIM 60
Query: 287 RNVKGPVREGDI 252
RNVKGPVREGDI
Sbjct: 61 RNVKGPVREGDI 72
>ref|XP_009397683.1| PREDICTED: 40S ribosomal protein S28-like [Musa acuminata subsp.
malaccensis]
Length = 65
Score = 100 bits (248), Expect = 9e-25
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MD+QAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 1 MDAQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 51
>ref|XP_009396924.1| PREDICTED: 40S ribosomal protein S28 [Musa acuminata subsp.
malaccensis]
ref|XP_009396925.1| PREDICTED: 40S ribosomal protein S28 [Musa acuminata subsp.
malaccensis]
ref|XP_009398420.1| PREDICTED: 40S ribosomal protein S28 [Musa acuminata subsp.
malaccensis]
ref|XP_009400847.1| PREDICTED: 40S ribosomal protein S28 [Musa acuminata subsp.
malaccensis]
ref|XP_009418809.1| PREDICTED: 40S ribosomal protein S28 [Musa acuminata subsp.
malaccensis]
ref|XP_009418811.1| PREDICTED: 40S ribosomal protein S28 [Musa acuminata subsp.
malaccensis]
ref|XP_018673995.1| PREDICTED: 40S ribosomal protein S28 [Musa acuminata subsp.
malaccensis]
ref|XP_018673996.1| PREDICTED: 40S ribosomal protein S28 [Musa acuminata subsp.
malaccensis]
Length = 65
Score = 100 bits (248), Expect = 9e-25
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MD+QAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 1 MDTQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 51
>ref|XP_020256600.1| 40S ribosomal protein S28 [Asparagus officinalis]
Length = 65
Score = 99.8 bits (247), Expect = 1e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MD+QAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGD+
Sbjct: 1 MDAQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDV 51
>ref|XP_010241388.1| PREDICTED: 40S ribosomal protein S28 [Nelumbo nucifera]
ref|XP_010241389.1| PREDICTED: 40S ribosomal protein S28 [Nelumbo nucifera]
ref|XP_010241390.1| PREDICTED: 40S ribosomal protein S28 [Nelumbo nucifera]
ref|XP_010241391.1| PREDICTED: 40S ribosomal protein S28 [Nelumbo nucifera]
ref|XP_020092731.1| 40S ribosomal protein S28-like [Ananas comosus]
ref|XP_020092732.1| 40S ribosomal protein S28-like [Ananas comosus]
gb|OAY64190.1| 40S ribosomal protein S28 [Ananas comosus]
gb|OAY66730.1| 40S ribosomal protein S28 [Ananas comosus]
Length = 65
Score = 99.8 bits (247), Expect = 1e-24
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MDSQ KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 1 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 51
>gb|OAY80870.1| 40S ribosomal protein S28, partial [Ananas comosus]
Length = 79
Score = 100 bits (248), Expect = 1e-24
Identities = 50/54 (92%), Positives = 52/54 (96%)
Frame = -1
Query: 413 LARMDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
+A MD+Q KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 12 VAAMDAQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 65
>gb|OUZ99539.1| Ribosomal protein S28e [Macleaya cordata]
gb|OVA18975.1| Ribosomal protein S28e [Macleaya cordata]
gb|OVA20666.1| Ribosomal protein S28e [Macleaya cordata]
gb|OVA20667.1| Ribosomal protein S28e [Macleaya cordata]
Length = 65
Score = 99.0 bits (245), Expect = 2e-24
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MDSQ KLAVV+KVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP+REGDI
Sbjct: 1 MDSQVKLAVVIKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDI 51
>gb|EEC74585.1| hypothetical protein OsI_10164 [Oryza sativa Indica Group]
Length = 101
Score = 99.8 bits (247), Expect = 3e-24
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = -1
Query: 410 ARMDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
A MD+Q KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 35 ASMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 87
>gb|ACG31085.1| 40S ribosomal protein S28 [Zea mays]
Length = 65
Score = 98.6 bits (244), Expect = 3e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MD+Q KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 51
>ref|NP_001147283.1| 40S ribosomal protein S28 [Zea mays]
ref|NP_001147474.1| 40S ribosomal protein S28 [Zea mays]
ref|NP_001147106.1| 40S ribosomal protein S28 [Zea mays]
ref|XP_002468448.1| 40S ribosomal protein S28 [Sorghum bicolor]
ref|XP_015632495.1| PREDICTED: 40S ribosomal protein S28 [Oryza sativa Japonica Group]
ref|XP_015614739.1| PREDICTED: 40S ribosomal protein S28 [Oryza sativa Japonica Group]
ref|XP_020099598.1| 40S ribosomal protein S28 [Ananas comosus]
ref|XP_020099599.1| 40S ribosomal protein S28 [Ananas comosus]
ref|XP_020181149.1| 40S ribosomal protein S28 [Aegilops tauschii subsp. tauschii]
ref|XP_020181150.1| 40S ribosomal protein S28 [Aegilops tauschii subsp. tauschii]
ref|XP_020175820.1| 40S ribosomal protein S28 [Aegilops tauschii subsp. tauschii]
ref|XP_021306979.1| 40S ribosomal protein S28 [Sorghum bicolor]
ref|XP_021306980.1| 40S ribosomal protein S28 [Sorghum bicolor]
pdb|3J60|CC Chain c, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome
dbj|BAF26498.1| Os10g0411700 [Oryza sativa Japonica Group]
gb|ACF86311.1| unknown [Zea mays]
gb|ACG24343.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG24347.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG25459.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG26566.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG26738.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG26863.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG27650.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG30883.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG30999.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG31175.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG31661.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG31904.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG47269.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG47462.1| 40S ribosomal protein S28 [Zea mays]
gb|EEE50948.1| hypothetical protein OsJ_31495 [Oryza sativa Japonica Group]
dbj|BAF10993.2| Os03g0167100 [Oryza sativa Japonica Group]
dbj|BAJ87180.1| predicted protein [Hordeum vulgare subsp. vulgare]
dbj|BAJ93212.1| predicted protein [Hordeum vulgare subsp. vulgare]
gb|EMS64988.1| 40S ribosomal protein S28 [Triticum urartu]
gb|KQK89165.1| hypothetical protein SETIT_038573mg [Setaria italica]
gb|OEL20194.1| 40S ribosomal protein S28 [Dichanthelium oligosanthes]
gb|ONL97069.1| 40S ribosomal protein S28 [Zea mays]
gb|AQL07313.1| 40S ribosomal protein S28 [Zea mays]
gb|AQL07314.1| 40S ribosomal protein S28 [Zea mays]
gb|PAN47374.1| hypothetical protein PAHAL_B03374 [Panicum hallii]
gb|PAN51410.1| hypothetical protein PAHAL_I00548 [Panicum hallii]
Length = 65
Score = 98.6 bits (244), Expect = 3e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MD+Q KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 51
>gb|ONL94056.1| 40S ribosomal protein S28 [Zea mays]
Length = 68
Score = 98.6 bits (244), Expect = 4e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MD+Q KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 4 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 54
>ref|XP_020104262.1| 40S ribosomal protein S28-like isoform X1 [Ananas comosus]
Length = 82
Score = 99.0 bits (245), Expect = 4e-24
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = -1
Query: 407 RMDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
RMD+Q KLAVVVKV+GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 17 RMDAQVKLAVVVKVIGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 68
>dbj|BAT10815.1| Os10g0411700, partial [Oryza sativa Japonica Group]
Length = 71
Score = 98.6 bits (244), Expect = 4e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MD+Q KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 7 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 57
>gb|OAY82565.1| 40S ribosomal protein S28, partial [Ananas comosus]
Length = 76
Score = 98.6 bits (244), Expect = 5e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MD+Q KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 51
>gb|OAY82556.1| 40S ribosomal protein S28, partial [Ananas comosus]
Length = 76
Score = 98.6 bits (244), Expect = 5e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MD+Q KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 1 MDAQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 51
>gb|KMZ73331.1| 40S ribosomal protein S28 [Zostera marina]
Length = 65
Score = 98.2 bits (243), Expect = 5e-24
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MD+Q KLAVVVK+MGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 1 MDTQVKLAVVVKIMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 51
>ref|XP_008789172.1| PREDICTED: 40S ribosomal protein S28 [Phoenix dactylifera]
ref|XP_008804325.1| PREDICTED: 40S ribosomal protein S28 [Phoenix dactylifera]
ref|XP_019703417.1| PREDICTED: 40S ribosomal protein S28 [Elaeis guineensis]
ref|XP_019706631.1| PREDICTED: 40S ribosomal protein S28 [Elaeis guineensis]
Length = 65
Score = 98.2 bits (243), Expect = 5e-24
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MD+Q KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGD+
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDV 51
>ref|XP_010233649.1| PREDICTED: 40S ribosomal protein S28 [Brachypodium distachyon]
ref|XP_010237562.1| PREDICTED: 40S ribosomal protein S28 [Brachypodium distachyon]
ref|XP_010237563.1| PREDICTED: 40S ribosomal protein S28 [Brachypodium distachyon]
ref|XP_014755691.1| PREDICTED: 40S ribosomal protein S28 [Brachypodium distachyon]
gb|KQJ87847.1| hypothetical protein BRADI_4g13890v3 [Brachypodium distachyon]
gb|KQJ87849.1| hypothetical protein BRADI_4g13910v3 [Brachypodium distachyon]
gb|KQJ92758.1| hypothetical protein BRADI_3g00500v3 [Brachypodium distachyon]
gb|KQJ92759.1| hypothetical protein BRADI_3g00500v3 [Brachypodium distachyon]
Length = 65
Score = 98.2 bits (243), Expect = 5e-24
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MD+Q KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP+REGDI
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDI 51
>gb|ONK74785.1| uncharacterized protein A4U43_C03F10120 [Asparagus officinalis]
Length = 122
Score = 99.8 bits (247), Expect = 6e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MD+QAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGD+
Sbjct: 58 MDAQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDV 108
>gb|AAP80664.1|AF479045_1 S28 ribosomal protein, partial [Triticum aestivum]
Length = 86
Score = 98.6 bits (244), Expect = 6e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = -1
Query: 404 MDSQAKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 252
MD+Q KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 22 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 72