BLASTX nr result

ID: Cheilocostus21_contig00004777 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00004777
         (711 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009406626.1| PREDICTED: probable bifunctional riboflavin ...    74   2e-11
ref|XP_009409285.1| PREDICTED: probable bifunctional riboflavin ...    58   5e-06

>ref|XP_009406626.1| PREDICTED: probable bifunctional riboflavin biosynthesis protein
           RIBA 1, chloroplastic [Musa acuminata subsp.
           malaccensis]
 ref|XP_009406627.1| PREDICTED: probable bifunctional riboflavin biosynthesis protein
           RIBA 1, chloroplastic [Musa acuminata subsp.
           malaccensis]
          Length = 552

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/83 (48%), Positives = 49/83 (59%)
 Frame = -3

Query: 250 VGFHRPRVHCFSSVSRSFKELGGFNSTYVVTRRILNLTPNGFKKTSCFALKANGGFTTVP 71
           VG  RP+VHCFS    SFK L      +VV +RI N T  GF K  CF+LK +  F  VP
Sbjct: 10  VGLRRPQVHCFSRGFISFKGL--CYKAFVVNQRISNFTSTGFGKAVCFSLKEDDRFIAVP 67

Query: 70  KSKENDVQSKENTVSAQDNATTN 2
           +S E+D+   E+ V  QDNAT N
Sbjct: 68  RSSESDILLGESAVVEQDNATVN 90


>ref|XP_009409285.1| PREDICTED: probable bifunctional riboflavin biosynthesis protein
           RIBA 1, chloroplastic [Musa acuminata subsp.
           malaccensis]
 ref|XP_018684299.1| PREDICTED: probable bifunctional riboflavin biosynthesis protein
           RIBA 1, chloroplastic [Musa acuminata subsp.
           malaccensis]
          Length = 546

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = -3

Query: 253 FVGFHRPRVHCFSSVSRSFKELGGF-NSTYVVTRRILNLTPNGFKKTSCFALKANGGFTT 77
           F+ F RPRVHC S  S SFKE  GF  S + V +R    T NGF+K +CFAL A      
Sbjct: 11  FLVFFRPRVHCISRGSSSFKEFRGFYYSEFAVNQR----TSNGFRKAACFALNA-----A 61

Query: 76  VPKSKENDVQSKENTVSAQDNATTN 2
           V +S E ++   ++T+  Q   T N
Sbjct: 62  VQRSSEGNMLPGQSTIIEQGCLTAN 86


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