BLASTX nr result

ID: Cheilocostus21_contig00004486 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00004486
         (1027 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PAN20319.1| hypothetical protein PAHAL_C03626 [Panicum hallii]      58   3e-06
ref|XP_020108005.1| 40S ribosomal protein S7 [Ananas comosus] >g...    57   6e-06

>gb|PAN20319.1| hypothetical protein PAHAL_C03626 [Panicum hallii]
          Length = 192

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -3

Query: 560 TAIHKGILEDIVYLVEIIGKRIRYCLDGAKVMKV 459
           TA+H GILED+VY  EI+GKR+RY LDGAKVMKV
Sbjct: 120 TAVHDGILEDVVYPAEIVGKRVRYHLDGAKVMKV 153


>ref|XP_020108005.1| 40S ribosomal protein S7 [Ananas comosus]
 ref|XP_020108006.1| 40S ribosomal protein S7 [Ananas comosus]
 ref|XP_020108007.1| 40S ribosomal protein S7 [Ananas comosus]
          Length = 192

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 24/34 (70%), Positives = 31/34 (91%)
 Frame = -3

Query: 560 TAIHKGILEDIVYLVEIIGKRIRYCLDGAKVMKV 459
           TA+H+GILED+VY  EI+GKRIRY LDG+K+MK+
Sbjct: 120 TAVHEGILEDVVYPAEIVGKRIRYRLDGSKIMKI 153


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