BLASTX nr result

ID: Cheilocostus21_contig00004198 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00004198
         (445 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009396425.1| PREDICTED: pentatricopeptide repeat-containi...    81   5e-15

>ref|XP_009396425.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290
           [Musa acuminata subsp. malaccensis]
 ref|XP_018681047.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290
           [Musa acuminata subsp. malaccensis]
          Length = 606

 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 50/128 (39%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
 Frame = +2

Query: 83  APAFLVVIKSGRLNRVD------LNSLSFC-KPECSAPAFY*KSNVAVAEEILMHSWDEE 241
           +P  LVV +SGRL  +       +  +SF  + +    A Y KS VA  ++I M +WD+E
Sbjct: 57  SPVLLVVAQSGRLCELKPLVMSRMTKISFSIRRDHVVSACYCKSGVAYRQQISMLTWDQE 116

Query: 242 GDVNKDGCLSKHLPLATPVFQQELGPEIGQRASSTKVQRLFELSKGELHYMEETNEDSLT 421
              + +  + K LPL + V QQELG EI    S +  +R F+LS+G+L ++EE +E+ L+
Sbjct: 117 VRFSTNEYIQKQLPLGSSVIQQELGVEITHDLSCSNSERQFQLSEGKLLFLEEQDEELLS 176

Query: 422 NRILILSR 445
            R+LILSR
Sbjct: 177 KRVLILSR 184


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