BLASTX nr result

ID: Cheilocostus21_contig00004060 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00004060
         (506 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009388982.1| PREDICTED: methyl-CpG-binding domain-contain...    72   8e-12
ref|XP_009397428.1| PREDICTED: methyl-CpG-binding domain-contain...    63   1e-08

>ref|XP_009388982.1| PREDICTED: methyl-CpG-binding domain-containing protein 11-like
           [Musa acuminata subsp. malaccensis]
          Length = 299

 Score = 72.0 bits (175), Expect = 8e-12
 Identities = 37/58 (63%), Positives = 42/58 (72%)
 Frame = -2

Query: 493 PPAANREEESAAIEKQDGEISSASSKHMGDAETVVLKEVPSASRSDGQHLPKASPVNC 320
           PP+ + +E SAA E QDGEI S  S H  DA  VV+KEVPSA  +DGQHLPK SPVNC
Sbjct: 244 PPSDHHKEASAAKENQDGEILSEKSSHKEDAGAVVMKEVPSA--TDGQHLPKTSPVNC 299


>ref|XP_009397428.1| PREDICTED: methyl-CpG-binding domain-containing protein 11-like
           [Musa acuminata subsp. malaccensis]
          Length = 298

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 31/57 (54%), Positives = 37/57 (64%)
 Frame = -2

Query: 493 PPAANREEESAAIEKQDGEISSASSKHMGDAETVVLKEVPSASRSDGQHLPKASPVN 323
           P A N EE SA  E QD E+ S +  H  D+  VV K+VPSA  SDG+HLP ASP+N
Sbjct: 241 PSAGNPEEASAGKEMQDREVLSGNISHKEDSSAVVSKDVPSAKCSDGEHLPSASPIN 297


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