BLASTX nr result
ID: Cheilocostus21_contig00003946
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00003946
(582 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009402400.1| PREDICTED: pentatricopeptide repeat-containi... 60 9e-14
ref|XP_008787689.1| PREDICTED: pentatricopeptide repeat-containi... 55 4e-13
ref|XP_019709184.1| PREDICTED: pentatricopeptide repeat-containi... 51 5e-12
ref|XP_020093580.1| pentatricopeptide repeat-containing protein ... 50 1e-10
gb|OAY77918.1| Pentatricopeptide repeat-containing protein [Anan... 50 1e-10
>ref|XP_009402400.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
[Musa acuminata subsp. malaccensis]
ref|XP_018684311.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
[Musa acuminata subsp. malaccensis]
ref|XP_018684314.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
[Musa acuminata subsp. malaccensis]
Length = 924
Score = 60.5 bits (145), Expect(3) = 9e-14
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = -2
Query: 473 LKAEALFAHATSGEFPVDPSMLDAMIECFSKLGKVGGSKSLLDQMNK 333
LKAEALFAHATSG DPS+LDA+IEC K+GK+ +K LDQM K
Sbjct: 117 LKAEALFAHATSGALSDDPSVLDAIIECLCKMGKLVEAKFHLDQMIK 163
Score = 37.7 bits (86), Expect(3) = 9e-14
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -1
Query: 228 PSLR*KGFLSQARHLFDIMPSTGFSPRLQMHKSFV 124
P+L KG+L QAR+LFD M TG P ++KS +
Sbjct: 213 PNLCSKGYLGQARYLFDTMIGTGLHPAAHVYKSLI 247
Score = 25.8 bits (55), Expect(3) = 9e-14
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 286 KFLEALGIVSLVAGAGDFP 230
KFLEA+ + L+AGAG +P
Sbjct: 185 KFLEAVDLFLLMAGAGVYP 203
>ref|XP_008787689.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
[Phoenix dactylifera]
Length = 1026
Score = 55.5 bits (132), Expect(3) = 4e-13
Identities = 28/53 (52%), Positives = 39/53 (73%)
Frame = -2
Query: 491 VSFG*TLKAEALFAHATSGEFPVDPSMLDAMIECFSKLGKVGGSKSLLDQMNK 333
V+ G LKAEALF++AT G P DPS+LD+M EC+ KLG + +K+ L+Q+ K
Sbjct: 115 VASGQLLKAEALFSYATKGNPPNDPSVLDSMTECYCKLGNLVQAKAHLNQLIK 167
Score = 38.1 bits (87), Expect(3) = 4e-13
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -1
Query: 213 KGFLSQARHLFDIMPSTGFSPRLQMHKSFVY 121
KG+L +AR LFDIM TG P ++ KS VY
Sbjct: 222 KGYLDEARCLFDIMAGTGLRPTARLFKSMVY 252
Score = 28.1 bits (61), Expect(3) = 4e-13
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -3
Query: 319 FDAIENVRSAE-KFLEALGIVSLVAGAGDFPSFFA 218
++A+ + AE K+LEAL + L+AGAG P F A
Sbjct: 177 YNALLHALCAELKYLEALDLFFLMAGAGVLPPFSA 211
>ref|XP_019709184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
[Elaeis guineensis]
ref|XP_019709185.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
[Elaeis guineensis]
ref|XP_019709186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
[Elaeis guineensis]
ref|XP_019709187.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
[Elaeis guineensis]
Length = 1026
Score = 50.8 bits (120), Expect(3) = 5e-12
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -2
Query: 491 VSFG*TLKAEALFAHATSGEFPVDPSMLDAMIECFSKLGKVGGSKSLLDQMNK 333
V+ G LKAEALF+HAT DPS+LD+M EC+ KLG + +K+ L+Q+ K
Sbjct: 115 VASGQLLKAEALFSHATKRNPLNDPSVLDSMTECYCKLGNLVQAKAHLNQLIK 167
Score = 39.7 bits (91), Expect(3) = 5e-12
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = -1
Query: 228 PSLR*KGFLSQARHLFDIMPSTGFSPRLQMHKSFVY 121
P L KG+L +AR+LFDIM G P ++ KS VY
Sbjct: 217 PGLCLKGYLDEARYLFDIMAGVGLRPTARLFKSMVY 252
Score = 27.3 bits (59), Expect(3) = 5e-12
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3
Query: 286 KFLEALGIVSLVAGAGDFPSFFA 218
K+LEAL + L+AGAG P F A
Sbjct: 189 KYLEALDLFFLMAGAGVLPPFSA 211
>ref|XP_020093580.1| pentatricopeptide repeat-containing protein At5g62370 [Ananas
comosus]
ref|XP_020093581.1| pentatricopeptide repeat-containing protein At5g62370 [Ananas
comosus]
ref|XP_020093582.1| pentatricopeptide repeat-containing protein At5g62370 [Ananas
comosus]
ref|XP_020093583.1| pentatricopeptide repeat-containing protein At5g62370 [Ananas
comosus]
ref|XP_020093584.1| pentatricopeptide repeat-containing protein At5g62370 [Ananas
comosus]
Length = 972
Score = 49.7 bits (117), Expect(3) = 1e-10
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -2
Query: 473 LKAEALFAHATSGEFPVDPSMLDAMIECFSKLGKVGGSKSLLDQMNK 333
LKAEAL+A A G P DP +LD+MI C+S+LG + +++ LD M K
Sbjct: 70 LKAEALYARAHEGTLPDDPLLLDSMIICYSELGNLVSARTHLDHMIK 116
Score = 41.6 bits (96), Expect(3) = 1e-10
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = -1
Query: 228 PSLR*KGFLSQARHLFDIMPSTGFSPRLQMHKSFVY 121
P L KGFL +AR LFD+M +G SP +++KS VY
Sbjct: 166 PGLCSKGFLDKARFLFDVMLGSGLSPSARLYKSLVY 201
Score = 21.9 bits (45), Expect(3) = 1e-10
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 328 RSMFDAIENVRSAEK-FLEALGIVSLVAGAGDFPSFFA 218
+ ++A+ + AE +LEA+ + L+AG G P A
Sbjct: 123 KDAYNALLHALCAESMYLEAMDLFVLMAGGGVLPPLSA 160
>gb|OAY77918.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
Length = 877
Score = 49.7 bits (117), Expect(3) = 1e-10
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -2
Query: 473 LKAEALFAHATSGEFPVDPSMLDAMIECFSKLGKVGGSKSLLDQMNK 333
LKAEAL+A A G P DP +LD+MI C+S+LG + +++ LD M K
Sbjct: 116 LKAEALYARAHEGTLPDDPLLLDSMIICYSELGNLVSARTHLDHMIK 162
Score = 41.6 bits (96), Expect(3) = 1e-10
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = -1
Query: 228 PSLR*KGFLSQARHLFDIMPSTGFSPRLQMHKSFVY 121
P L KGFL +AR LFD+M +G SP +++KS VY
Sbjct: 212 PGLCSKGFLDKARFLFDVMLGSGLSPSARLYKSLVY 247
Score = 21.9 bits (45), Expect(3) = 1e-10
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 328 RSMFDAIENVRSAEK-FLEALGIVSLVAGAGDFPSFFA 218
+ ++A+ + AE +LEA+ + L+AG G P A
Sbjct: 169 KDAYNALLHALCAESMYLEAMDLFVLMAGGGVLPPLSA 206