BLASTX nr result
ID: Cheilocostus21_contig00002307
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00002307
(543 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009398052.1| PREDICTED: DNA-directed RNA polymerase II su... 97 3e-22
ref|XP_020691757.1| DNA-directed RNA polymerase II subunit 4 iso... 91 4e-20
ref|XP_020590851.1| DNA-directed RNA polymerase II subunit 4 iso... 90 1e-19
ref|XP_010940283.1| PREDICTED: DNA-directed RNA polymerase II su... 90 1e-19
gb|KMZ71261.1| hypothetical protein ZOSMA_184G00120 [Zostera mar... 87 2e-19
ref|XP_020691754.1| DNA-directed RNA polymerase II subunit 4 iso... 91 2e-19
ref|XP_017244290.1| PREDICTED: DNA-directed RNA polymerase II su... 89 2e-19
gb|OVA08111.1| RNA polymerase II [Macleaya cordata] 88 7e-19
ref|XP_008813022.1| PREDICTED: DNA-directed RNA polymerase II su... 88 7e-19
emb|CDP12892.1| unnamed protein product [Coffea canephora] 88 7e-19
gb|KMZ56185.1| DNA-directed RNA polymerase II subunit 4 [Zostera... 87 1e-18
ref|XP_009781522.1| PREDICTED: DNA-directed RNA polymerase II su... 87 1e-18
gb|PIA47899.1| hypothetical protein AQUCO_01400477v1 [Aquilegia ... 86 1e-18
ref|XP_020261870.1| DNA-directed RNA polymerase II subunit 4 [As... 87 2e-18
ref|XP_019199551.1| PREDICTED: DNA-directed RNA polymerase II su... 87 2e-18
gb|EPS68209.1| hypothetical protein M569_06563 [Genlisea aurea] 87 2e-18
gb|KDO59899.1| hypothetical protein CISIN_1g0325681mg, partial [... 84 3e-18
gb|KDO37892.1| hypothetical protein CISIN_1g0424881mg, partial [... 84 3e-18
gb|PIA47900.1| hypothetical protein AQUCO_01400477v1 [Aquilegia ... 86 3e-18
gb|KHG12393.1| DNA-directed RNA polymerase II subunit RPB4 [Goss... 86 4e-18
>ref|XP_009398052.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Musa acuminata
subsp. malaccensis]
Length = 138
Score = 96.7 bits (239), Expect = 3e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPSIKSKGRMLEDDAIEKMLHDLSLIKKFE
Sbjct: 91 LCVLGNLCPETVEEAIAIVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 138
>ref|XP_020691757.1| DNA-directed RNA polymerase II subunit 4 isoform X5 [Dendrobium
catenatum]
Length = 138
Score = 90.9 bits (224), Expect = 4e-20
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPS+KSKGR LEDDAIEKML+DLSLIKKFE
Sbjct: 91 LCVLGNLCPETVEEAIAMVPSLKSKGRALEDDAIEKMLNDLSLIKKFE 138
>ref|XP_020590851.1| DNA-directed RNA polymerase II subunit 4 isoform X2 [Phalaenopsis
equestris]
Length = 138
Score = 89.7 bits (221), Expect = 1e-19
Identities = 43/48 (89%), Positives = 47/48 (97%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPS+K+KGR LEDDAIEKML+DLSLIKKFE
Sbjct: 91 LCVLGNLCPETVEEAIAMVPSLKTKGRSLEDDAIEKMLNDLSLIKKFE 138
>ref|XP_010940283.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Elaeis
guineensis]
Length = 138
Score = 89.7 bits (221), Expect = 1e-19
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPSIKSKGR+ EDDAIEKML+DLSLIKKFE
Sbjct: 91 LCVLGNLCPETVEEAIAMVPSIKSKGRIHEDDAIEKMLNDLSLIKKFE 138
>gb|KMZ71261.1| hypothetical protein ZOSMA_184G00120 [Zostera marina]
Length = 69
Score = 87.4 bits (215), Expect = 2e-19
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEA+A+VPS+K+KGR DDAIEKMLHDLSLIKKFE
Sbjct: 22 LCVLGNLCPETVEEAVAMVPSVKTKGRSHTDDAIEKMLHDLSLIKKFE 69
>ref|XP_020691754.1| DNA-directed RNA polymerase II subunit 4 isoform X2 [Dendrobium
catenatum]
gb|PKU87537.1| hypothetical protein MA16_Dca018068 [Dendrobium catenatum]
Length = 201
Score = 90.9 bits (224), Expect = 2e-19
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPS+KSKGR LEDDAIEKML+DLSLIKKFE
Sbjct: 154 LCVLGNLCPETVEEAIAMVPSLKSKGRALEDDAIEKMLNDLSLIKKFE 201
>ref|XP_017244290.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Daucus carota
subsp. sativus]
gb|KZM98375.1| hypothetical protein DCAR_014263 [Daucus carota subsp. sativus]
Length = 138
Score = 89.0 bits (219), Expect = 2e-19
Identities = 42/48 (87%), Positives = 47/48 (97%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPSI+S+GR L+DDAIEKMLHDLSLIKKF+
Sbjct: 91 LCVLGNLCPETVEEAIAMVPSIRSRGRGLDDDAIEKMLHDLSLIKKFD 138
>gb|OVA08111.1| RNA polymerase II [Macleaya cordata]
Length = 138
Score = 87.8 bits (216), Expect = 7e-19
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPSIK+KGR EDDAIEKML+DLSLIKKFE
Sbjct: 91 LCVLGNLCPETVEEAIAMVPSIKTKGRAHEDDAIEKMLNDLSLIKKFE 138
>ref|XP_008813022.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Phoenix
dactylifera]
Length = 138
Score = 87.8 bits (216), Expect = 7e-19
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPSIK KGR+ EDDAIEKML+DLSLIKKFE
Sbjct: 91 LCVLGNLCPETVEEAIAMVPSIKRKGRIHEDDAIEKMLNDLSLIKKFE 138
>emb|CDP12892.1| unnamed protein product [Coffea canephora]
Length = 138
Score = 87.8 bits (216), Expect = 7e-19
Identities = 41/48 (85%), Positives = 47/48 (97%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPSIK++GR L+DDAIEKML+DLSL+KKFE
Sbjct: 91 LCVLGNLCPETVEEAIAMVPSIKNRGRALDDDAIEKMLNDLSLVKKFE 138
>gb|KMZ56185.1| DNA-directed RNA polymerase II subunit 4 [Zostera marina]
Length = 138
Score = 87.4 bits (215), Expect = 1e-18
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEA+A+VPS+K+KGR DDAIEKMLHDLSLIKKFE
Sbjct: 91 LCVLGNLCPETVEEAVAMVPSVKTKGRSHTDDAIEKMLHDLSLIKKFE 138
>ref|XP_009781522.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Nicotiana
sylvestris]
ref|XP_016497278.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Nicotiana
tabacum]
Length = 138
Score = 87.4 bits (215), Expect = 1e-18
Identities = 41/48 (85%), Positives = 48/48 (100%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPSIK++GRML+++AIEKML+DLSLIKKFE
Sbjct: 91 LCVLGNLCPETVEEAIAMVPSIKNRGRMLDEEAIEKMLNDLSLIKKFE 138
>gb|PIA47899.1| hypothetical protein AQUCO_01400477v1 [Aquilegia coerulea]
Length = 114
Score = 86.3 bits (212), Expect = 1e-18
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPSIKS+GR ED+AIEKML+DLSLIKKFE
Sbjct: 67 LCVLGNLCPETVEEAIAMVPSIKSRGRTHEDEAIEKMLNDLSLIKKFE 114
>ref|XP_020261870.1| DNA-directed RNA polymerase II subunit 4 [Asparagus officinalis]
gb|ONK81688.1| uncharacterized protein A4U43_C01F31860 [Asparagus officinalis]
Length = 138
Score = 86.7 bits (213), Expect = 2e-18
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
L V+GNLCPETVEEAIA+VPS+KSKGR L+DDAIEKMLHDLSLIKKFE
Sbjct: 91 LVVIGNLCPETVEEAIAMVPSMKSKGRGLDDDAIEKMLHDLSLIKKFE 138
>ref|XP_019199551.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Ipomoea nil]
Length = 138
Score = 86.7 bits (213), Expect = 2e-18
Identities = 41/48 (85%), Positives = 47/48 (97%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPSIK++GR L+D+AIEKML+DLSLIKKFE
Sbjct: 91 LCVLGNLCPETVEEAIAMVPSIKNRGRALDDEAIEKMLNDLSLIKKFE 138
>gb|EPS68209.1| hypothetical protein M569_06563 [Genlisea aurea]
Length = 138
Score = 86.7 bits (213), Expect = 2e-18
Identities = 41/48 (85%), Positives = 47/48 (97%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAI++VPSIK+KGR L+D+AIEKML+DLSLIKKFE
Sbjct: 91 LCVLGNLCPETVEEAISMVPSIKAKGRALDDEAIEKMLNDLSLIKKFE 138
>gb|KDO59899.1| hypothetical protein CISIN_1g0325681mg, partial [Citrus sinensis]
Length = 59
Score = 84.0 bits (206), Expect = 3e-18
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPSIK++GR +D+AIEKML+DLSLIKKFE
Sbjct: 12 LCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 59
>gb|KDO37892.1| hypothetical protein CISIN_1g0424881mg, partial [Citrus sinensis]
Length = 61
Score = 84.0 bits (206), Expect = 3e-18
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPSIK++GR +D+AIEKML+DLSLIKKFE
Sbjct: 14 LCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 61
>gb|PIA47900.1| hypothetical protein AQUCO_01400477v1 [Aquilegia coerulea]
Length = 139
Score = 86.3 bits (212), Expect = 3e-18
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPSIKS+GR ED+AIEKML+DLSLIKKFE
Sbjct: 92 LCVLGNLCPETVEEAIAMVPSIKSRGRTHEDEAIEKMLNDLSLIKKFE 139
>gb|KHG12393.1| DNA-directed RNA polymerase II subunit RPB4 [Gossypium arboreum]
gb|KJB38134.1| hypothetical protein B456_006G238100 [Gossypium raimondii]
gb|PPD72010.1| hypothetical protein GOBAR_DD31092 [Gossypium barbadense]
gb|PPS08285.1| hypothetical protein GOBAR_AA12366 [Gossypium barbadense]
Length = 124
Score = 85.5 bits (210), Expect = 4e-18
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = +1
Query: 1 LCVLGNLCPETVEEAIALVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 144
LCVLGNLCPETVEEAIA+VPSIK+KGR +DDAIE+ML+DLSLIKKFE
Sbjct: 77 LCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDAIERMLNDLSLIKKFE 124