BLASTX nr result

ID: Cheilocostus21_contig00002299 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00002299
         (573 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009397707.1| PREDICTED: small nuclear ribonucleoprotein-a...   194   1e-58
ref|XP_017234761.1| PREDICTED: small nuclear ribonucleoprotein-a...   184   4e-55
gb|PKA59767.1| hypothetical protein AXF42_Ash011891 [Apostasia s...   182   6e-54
ref|XP_006280941.2| small nuclear ribonucleoprotein-associated p...   181   6e-54
gb|EOA13839.1| hypothetical protein CARUB_v10026942mg, partial [...   181   1e-53
ref|XP_023734665.1| small nuclear ribonucleoprotein-associated p...   181   2e-53
ref|XP_020579858.1| small nuclear ribonucleoprotein-associated p...   181   2e-53
ref|XP_023764701.1| small nuclear ribonucleoprotein-associated p...   180   2e-53
dbj|GAV65600.1| LSM domain-containing protein [Cephalotus follic...   180   3e-53
gb|KVI09709.1| Like-Sm (LSM) domain-containing protein [Cynara c...   180   4e-53
ref|XP_002865361.1| small nuclear ribonucleoprotein-associated p...   179   4e-53
gb|KVI05011.1| Like-Sm (LSM) domain-containing protein [Cynara c...   179   5e-53
dbj|BAD43836.1| unknown protein [Arabidopsis thaliana]                179   6e-53
ref|NP_199263.1| Small nuclear ribonucleoprotein family protein ...   179   6e-53
gb|AAM61039.1| putative snRNP protein [Arabidopsis thaliana]          179   6e-53
ref|XP_012075536.1| small nuclear ribonucleoprotein-associated p...   180   6e-53
ref|XP_020677094.1| small nuclear ribonucleoprotein-associated p...   179   6e-53
ref|XP_021644518.1| small nuclear ribonucleoprotein-associated p...   179   8e-53
ref|XP_006377905.1| small nuclear ribonucleoprotein associated p...   178   1e-52
ref|XP_010494476.1| PREDICTED: small nuclear ribonucleoprotein-a...   178   1e-52

>ref|XP_009397707.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
           B-like [Musa acuminata subsp. malaccensis]
          Length = 268

 Score =  194 bits (492), Expect = 1e-58
 Identities = 105/154 (68%), Positives = 108/154 (70%), Gaps = 5/154 (3%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGA--- 296
           MSMSKGSKM QYINYRMRVTIQD RQLVGKFMAFDRHMNLVLGDCEEFR+LPPVKGA   
Sbjct: 1   MSMSKGSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRRLPPVKGAAAA 60

Query: 297 --KKPGXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXX 470
             KKPG       TLGLV+LRGE V+SMTVEGPPPPDESRAKAHAA              
Sbjct: 61  AGKKPGEEREDRRTLGLVLLRGEEVVSMTVEGPPPPDESRAKAHAAAALAGPGVGRAAGR 120

Query: 471 XIPTAPLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
            IPTAPLVQAQ                MMQPQIS
Sbjct: 121 GIPTAPLVQAQPGLAGPVRGVGGPAPGMMQPQIS 154


>ref|XP_017234761.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
           B'-like [Daucus carota subsp. sativus]
 gb|KZN05794.1| hypothetical protein DCAR_006631 [Daucus carota subsp. sativus]
          Length = 262

 Score =  184 bits (468), Expect = 4e-55
 Identities = 98/149 (65%), Positives = 103/149 (69%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSK SKM QYINYRMRVTIQD RQLVGKFMAFDRHMNLV+GDCEEFRKLPP+KGAKK 
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPLKGAKKS 60

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPPDESRA+A AA               +PT 
Sbjct: 61  DEPREDRRTLGLVLLRGEEVISMTVEGPPPPDESRARAAAAANLSGPGVGRAAGRGVPTG 120

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PLVQAQ                MMQPQIS
Sbjct: 121 PLVQAQPGLAGPVRGIGGPAPGMMQPQIS 149


>gb|PKA59767.1| hypothetical protein AXF42_Ash011891 [Apostasia shenzhenica]
          Length = 285

 Score =  182 bits (462), Expect = 6e-54
 Identities = 99/153 (64%), Positives = 105/153 (68%), Gaps = 4/153 (2%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSKGSKM QYINYRMRVTIQD R LVGKFMAFDRHMNLVLGDCEEFRKLPP KG+KK 
Sbjct: 1   MSMSKGSKMLQYINYRMRVTIQDGRMLVGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKKA 60

Query: 306 G----XXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXX 473
           G           TLGLV+LRGE V+SMTVEGPPPPDESRAKA AA+              
Sbjct: 61  GGGTAEEREDRRTLGLVLLRGEEVVSMTVEGPPPPDESRAKATAASALAGPGIGRAAGRG 120

Query: 474 IPTAPLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           IPTAP+VQAQ                MMQPQI+
Sbjct: 121 IPTAPMVQAQPGLAGPIRGVGGPSPGMMQPQIA 153


>ref|XP_006280941.2| small nuclear ribonucleoprotein-associated protein B' [Capsella
           rubella]
 ref|XP_023638092.1| small nuclear ribonucleoprotein-associated protein B' [Capsella
           rubella]
          Length = 252

 Score =  181 bits (459), Expect = 6e-54
 Identities = 95/149 (63%), Positives = 102/149 (68%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSK SKM Q+INYRMRVTIQD RQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG KK 
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGGKKT 60

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPP+ESRAK+ +AT              +PT 
Sbjct: 61  NEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSATAVAGPGIGRAAGRGVPTG 120

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PLVQAQ                MMQPQIS
Sbjct: 121 PLVQAQPGLSGPVRGIGGPAPGMMQPQIS 149


>gb|EOA13839.1| hypothetical protein CARUB_v10026942mg, partial [Capsella rubella]
          Length = 275

 Score =  181 bits (459), Expect = 1e-53
 Identities = 95/149 (63%), Positives = 102/149 (68%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSK SKM Q+INYRMRVTIQD RQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG KK 
Sbjct: 24  MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGGKKT 83

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPP+ESRAK+ +AT              +PT 
Sbjct: 84  NEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSATAVAGPGIGRAAGRGVPTG 143

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PLVQAQ                MMQPQIS
Sbjct: 144 PLVQAQPGLSGPVRGIGGPAPGMMQPQIS 172


>ref|XP_023734665.1| small nuclear ribonucleoprotein-associated protein B'-like [Lactuca
           sativa]
 ref|XP_023734666.1| small nuclear ribonucleoprotein-associated protein B'-like [Lactuca
           sativa]
 ref|XP_023734667.1| small nuclear ribonucleoprotein-associated protein B'-like [Lactuca
           sativa]
 ref|XP_023734668.1| small nuclear ribonucleoprotein-associated protein B'-like [Lactuca
           sativa]
 ref|XP_023734669.1| small nuclear ribonucleoprotein-associated protein B'-like [Lactuca
           sativa]
 ref|XP_023734670.1| small nuclear ribonucleoprotein-associated protein B'-like [Lactuca
           sativa]
 ref|XP_023734672.1| small nuclear ribonucleoprotein-associated protein B'-like [Lactuca
           sativa]
 ref|XP_023734673.1| small nuclear ribonucleoprotein-associated protein B'-like [Lactuca
           sativa]
 gb|PLY73162.1| hypothetical protein LSAT_2X112821 [Lactuca sativa]
          Length = 279

 Score =  181 bits (458), Expect = 2e-53
 Identities = 98/149 (65%), Positives = 103/149 (69%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSKGSKM Q+INYRMRVTIQD RQLVGKFMAFDRHMNLV+GDCEEFRKLPP KGAKK 
Sbjct: 1   MSMSKGSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKK- 59

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPPDE+RAKA  A               IPTA
Sbjct: 60  NEEREDRRTLGLVLLRGEEVISMTVEGPPPPDENRAKAVGAAALAGPGLGRAAGRGIPTA 119

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PL+QAQ                MMQPQIS
Sbjct: 120 PLIQAQPGLAGPVRGIGGPAPGMMQPQIS 148


>ref|XP_020579858.1| small nuclear ribonucleoprotein-associated protein B' [Phalaenopsis
           equestris]
          Length = 284

 Score =  181 bits (458), Expect = 2e-53
 Identities = 98/153 (64%), Positives = 104/153 (67%), Gaps = 4/153 (2%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSKGSKM QYINYRMRVTIQD R LVGKFMAFDRHMNLVLGDCEEFRKLPP KG+KK 
Sbjct: 1   MSMSKGSKMLQYINYRMRVTIQDGRMLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGSKKG 60

Query: 306 G----XXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXX 473
           G           TLGLV+LRGE V+SMTVEGPPPPDESRAKA AA+              
Sbjct: 61  GGGLPEEREDRRTLGLVLLRGEEVVSMTVEGPPPPDESRAKASAASALAGPGIGRAAGRG 120

Query: 474 IPTAPLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           IPTAPL+ AQ                MMQPQI+
Sbjct: 121 IPTAPLIHAQPGLAGPVRGIGGPSPGMMQPQIA 153


>ref|XP_023764701.1| small nuclear ribonucleoprotein-associated protein B'-like [Lactuca
           sativa]
 ref|XP_023764702.1| small nuclear ribonucleoprotein-associated protein B'-like [Lactuca
           sativa]
 gb|PLY84819.1| hypothetical protein LSAT_8X20501 [Lactuca sativa]
          Length = 272

 Score =  180 bits (457), Expect = 2e-53
 Identities = 97/149 (65%), Positives = 103/149 (69%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSKGSKM Q+INYRMR+TIQD RQLVGKFMAFDRHMNLV+GDCEEFRKLPP KGAKK 
Sbjct: 1   MSMSKGSKMLQFINYRMRITIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKK- 59

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPPDE+RAKA  A               IPTA
Sbjct: 60  NEEREDRRTLGLVLLRGEEVISMTVEGPPPPDENRAKAVGAAALAGPGLGRAAGRGIPTA 119

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PL+QAQ                MMQPQIS
Sbjct: 120 PLIQAQPGLAGPVRGIGGPAPGMMQPQIS 148


>dbj|GAV65600.1| LSM domain-containing protein [Cephalotus follicularis]
          Length = 279

 Score =  180 bits (457), Expect = 3e-53
 Identities = 95/149 (63%), Positives = 102/149 (68%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSK SKM QY+NYRMRVTIQD RQLVGKFMAFDRHMNLVLGDCEEFRKLPP KG K  
Sbjct: 1   MSMSKSSKMLQYVNYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTT 60

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPP+ESRAKA +A+              +PTA
Sbjct: 61  NDDREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSASAIAGPGIGRAAGRGVPTA 120

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PL+QAQ                MMQPQIS
Sbjct: 121 PLIQAQPGLAGPVRGVGGPAPGMMQPQIS 149


>gb|KVI09709.1| Like-Sm (LSM) domain-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 279

 Score =  180 bits (456), Expect = 4e-53
 Identities = 98/149 (65%), Positives = 102/149 (68%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSK SKM QYINYRMRVTIQD RQLVGKFMAFDRHMNLV+GDCEEFRKLPP KGAKK 
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKK- 59

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPPDE+RAKA  A               IPTA
Sbjct: 60  NEEREDRRTLGLVLLRGEEVISMTVEGPPPPDENRAKAVGAAALAGPGLGRAAGRGIPTA 119

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PL+QAQ                MMQPQIS
Sbjct: 120 PLIQAQPGLAGPVRGVGGPAPGMMQPQIS 148


>ref|XP_002865361.1| small nuclear ribonucleoprotein-associated proteins B and B'
           [Arabidopsis lyrata subsp. lyrata]
 gb|EFH41620.1| hypothetical protein ARALYDRAFT_494537 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 256

 Score =  179 bits (454), Expect = 4e-53
 Identities = 94/149 (63%), Positives = 102/149 (68%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSK SKM Q+INYRMRVTIQD RQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG+KK 
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGSKKT 60

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPP+ESRAK+ + T              +PT 
Sbjct: 61  KEDREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTG 120

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PLVQAQ                MMQPQIS
Sbjct: 121 PLVQAQPGLSGPVRGIGGPAPGMMQPQIS 149


>gb|KVI05011.1| Like-Sm (LSM) domain-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 277

 Score =  179 bits (455), Expect = 5e-53
 Identities = 96/149 (64%), Positives = 103/149 (69%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSKGSKM Q+INYRMR+TIQD RQLVGKFMAFDRHMNLV+GDCEEFRKLPP KGAKK 
Sbjct: 1   MSMSKGSKMLQFINYRMRITIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKK- 59

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPPDE+RAKA  A               IPTA
Sbjct: 60  NEEREDRRTLGLVLLRGEEVISMTVEGPPPPDENRAKAVGAAALAGPGLGRAAGRGIPTA 119

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           P++QAQ                MMQPQIS
Sbjct: 120 PMIQAQPGLAGPVRGIGGPAPGMMQPQIS 148


>dbj|BAD43836.1| unknown protein [Arabidopsis thaliana]
          Length = 254

 Score =  179 bits (453), Expect = 6e-53
 Identities = 94/149 (63%), Positives = 101/149 (67%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSK SKM Q+INYRMRVTIQD RQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG KK 
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGNKKT 60

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPP+ESRAK+ + T              +PT 
Sbjct: 61  NEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTG 120

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PLVQAQ                MMQPQIS
Sbjct: 121 PLVQAQPGLSGPVRGIGGPAPGMMQPQIS 149


>ref|NP_199263.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
           thaliana]
 ref|NP_001032011.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
           thaliana]
 dbj|BAB09157.1| unnamed protein product [Arabidopsis thaliana]
 gb|AAK68796.1| Unknown protein [Arabidopsis thaliana]
 gb|AAL66885.1| unknown protein [Arabidopsis thaliana]
 dbj|BAD44612.1| unknown protein [Arabidopsis thaliana]
 dbj|BAD95039.1| hypothetical protein [Arabidopsis thaliana]
 gb|AED95116.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
           thaliana]
 gb|AED95117.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
           thaliana]
 gb|OAO95911.1| hypothetical protein AXX17_AT5G42630 [Arabidopsis thaliana]
          Length = 254

 Score =  179 bits (453), Expect = 6e-53
 Identities = 94/149 (63%), Positives = 101/149 (67%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSK SKM Q+INYRMRVTIQD RQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG KK 
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGNKKT 60

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPP+ESRAK+ + T              +PT 
Sbjct: 61  NEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTG 120

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PLVQAQ                MMQPQIS
Sbjct: 121 PLVQAQPGLSGPVRGIGGPAPGMMQPQIS 149


>gb|AAM61039.1| putative snRNP protein [Arabidopsis thaliana]
          Length = 254

 Score =  179 bits (453), Expect = 6e-53
 Identities = 94/149 (63%), Positives = 101/149 (67%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSK SKM Q+INYRMRVTIQD RQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG KK 
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGNKKT 60

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPP+ESRAK+ + T              +PT 
Sbjct: 61  SEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTG 120

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PLVQAQ                MMQPQIS
Sbjct: 121 PLVQAQPGLSGPVRGIGGPAPGMMQPQIS 149


>ref|XP_012075536.1| small nuclear ribonucleoprotein-associated protein B' [Jatropha
           curcas]
 gb|KDP34864.1| hypothetical protein JCGZ_09152 [Jatropha curcas]
          Length = 291

 Score =  180 bits (456), Expect = 6e-53
 Identities = 99/149 (66%), Positives = 103/149 (69%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSK SKM QYINYRMRVTIQD RQLVGKFMAFDRHMNLVLGDCEEFRKLPP KG KK 
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKN 59

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPP+ESRAKA +AT              IPTA
Sbjct: 60  NEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSATAIAGPGIGRAAGRGIPTA 119

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PLVQAQ                MMQPQ+S
Sbjct: 120 PLVQAQPGLAGPVRGVGGPAPGMMQPQLS 148


>ref|XP_020677094.1| small nuclear ribonucleoprotein-associated protein B' [Dendrobium
           catenatum]
 gb|PKU69644.1| hypothetical protein MA16_Dca017531 [Dendrobium catenatum]
          Length = 282

 Score =  179 bits (455), Expect = 6e-53
 Identities = 97/153 (63%), Positives = 103/153 (67%), Gaps = 4/153 (2%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKK- 302
           MSMSKGSKM QYINYRMRVTIQD R LVGKFMAFDRHMNLVLGDCEEFRKLPP KG+KK 
Sbjct: 1   MSMSKGSKMLQYINYRMRVTIQDGRMLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGSKKV 60

Query: 303 ---PGXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXX 473
              P        TLGLV+LRGE V+SMTVEGPPPPDESRAKA  A+              
Sbjct: 61  GGGPPEEREDRRTLGLVLLRGEEVVSMTVEGPPPPDESRAKASTASALAGPGIGRAAGRG 120

Query: 474 IPTAPLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           IPTAPL+ AQ                MMQPQI+
Sbjct: 121 IPTAPLIHAQPGLAGPVRGIGGPSPGMMQPQIA 153


>ref|XP_021644518.1| small nuclear ribonucleoprotein-associated protein B'-like [Hevea
           brasiliensis]
 ref|XP_021644519.1| small nuclear ribonucleoprotein-associated protein B'-like [Hevea
           brasiliensis]
          Length = 291

 Score =  179 bits (455), Expect = 8e-53
 Identities = 98/149 (65%), Positives = 103/149 (69%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSK SKM QYINYRMRVTIQD RQLVGKFMAFDRHMNLVLGDCEEFRKLPP KG KK 
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKN 59

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPP+ESRAKA +AT              IPTA
Sbjct: 60  NEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSATAVTGPGIGRAAGRGIPTA 119

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PL+QAQ                MMQPQ+S
Sbjct: 120 PLIQAQPGLAGPVRGIGGPAPGMMQPQLS 148


>ref|XP_006377905.1| small nuclear ribonucleoprotein associated protein B [Populus
           trichocarpa]
          Length = 250

 Score =  178 bits (451), Expect = 1e-52
 Identities = 98/149 (65%), Positives = 102/149 (68%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSK SKM QYINYRMRVTIQD RQLVGKFMAFDRHMNLVLGDCEEFRKLPP KG KK 
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKN 59

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPP+ESRAKA +A               IPTA
Sbjct: 60  NEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAVAGPGLGRAAGRGIPTA 119

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PLVQAQ                MMQPQ+S
Sbjct: 120 PLVQAQPGLAGPVRGVGGPSPGMMQPQLS 148


>ref|XP_010494476.1| PREDICTED: small nuclear ribonucleoprotein-associated proteins B
           and B'-like [Camelina sativa]
          Length = 256

 Score =  178 bits (451), Expect = 1e-52
 Identities = 93/149 (62%), Positives = 101/149 (67%)
 Frame = +3

Query: 126 MSMSKGSKMKQYINYRMRVTIQDDRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGAKKP 305
           MSMSK SKM Q+IN+RMRVTIQD RQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG KK 
Sbjct: 1   MSMSKSSKMLQFINFRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGGKKT 60

Query: 306 GXXXXXXXTLGLVILRGETVISMTVEGPPPPDESRAKAHAATXXXXXXXXXXXXXXIPTA 485
                   TLGLV+LRGE VISMTVEGPPPP+ESRAK+ + T              +PT 
Sbjct: 61  NEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTG 120

Query: 486 PLVQAQXXXXXXXXXXXXXXXXMMQPQIS 572
           PLVQAQ                MMQPQIS
Sbjct: 121 PLVQAQPGLSGPVRGIGGPAPNMMQPQIS 149


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