BLASTX nr result

ID: Cheilocostus21_contig00002292 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00002292
         (725 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009402418.2| PREDICTED: zinc finger CCCH domain-containin...    60   1e-06
ref|XP_018682110.1| PREDICTED: zinc finger CCCH domain-containin...    60   1e-06

>ref|XP_009402418.2| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 734

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 31/46 (67%), Positives = 36/46 (78%), Gaps = 8/46 (17%)
 Frame = +2

Query: 2   NASSNNDHL-------TSSSLDVPSFTS-CFLQMPRFSSGHGAIGM 115
           ++SSNN HL       T+SSLDVPSF+S CF QMPRFSSGHGA+GM
Sbjct: 689 SSSSNNSHLIASTLLPTTSSLDVPSFSSSCFFQMPRFSSGHGAVGM 734


>ref|XP_018682110.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 735

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 31/46 (67%), Positives = 36/46 (78%), Gaps = 8/46 (17%)
 Frame = +2

Query: 2   NASSNNDHL-------TSSSLDVPSFTS-CFLQMPRFSSGHGAIGM 115
           ++SSNN HL       T+SSLDVPSF+S CF QMPRFSSGHGA+GM
Sbjct: 690 SSSSNNSHLIASTLLPTTSSLDVPSFSSSCFFQMPRFSSGHGAVGM 735


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