BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00001839
         (1247 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009418294.1| PREDICTED: DNA-directed RNA polymerases II, ...   575   0.0  
ref|XP_010943195.1| PREDICTED: DNA-directed RNA polymerases II, ...   521   0.0  
ref|XP_020109766.1| DNA-directed RNA polymerases II, IV and V su...   521   0.0  
gb|OAY65904.1| DNA-directed RNA polymerases II, IV and V subunit...   518   0.0  
ref|XP_020673703.1| DNA-directed RNA polymerases II, IV and V su...   514   e-180
ref|XP_020593275.1| DNA-directed RNA polymerases II, IV and V su...   513   e-180
gb|PKA55547.1| DNA-directed RNA polymerase II subunit RPB3-A [Ap...   511   e-179
ref|XP_010241296.1| PREDICTED: DNA-directed RNA polymerases II, ...   504   e-176
ref|XP_020265573.1| DNA-directed RNA polymerases II, IV and V su...   504   e-176
gb|ONK70315.1| uncharacterized protein A4U43_C05F32460 [Asparagu...   504   e-175
ref|XP_010275045.1| PREDICTED: DNA-directed RNA polymerases II, ...   497   e-173
ref|XP_006853170.1| DNA-directed RNA polymerases II, IV and V su...   491   e-171
gb|OVA02066.1| DNA-directed RNA polymerase [Macleaya cordata]         495   e-171
ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, ...   488   e-170
ref|XP_007042502.1| PREDICTED: DNA-directed RNA polymerases II, ...   488   e-170
ref|XP_010065975.1| PREDICTED: DNA-directed RNA polymerases II, ...   486   e-169
gb|PIA27129.1| hypothetical protein AQUCO_08300072v1 [Aquilegia ...   486   e-169
ref|XP_022726703.1| DNA-directed RNA polymerases II, IV and V su...   486   e-169
ref|XP_006422955.1| DNA-directed RNA polymerases II, IV and V su...   485   e-169
ref|XP_022147788.1| DNA-directed RNA polymerases II, IV and V su...   484   e-168

>ref|XP_009418294.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Musa
            acuminata subsp. malaccensis]
          Length = 330

 Score =  575 bits (1481), Expect = 0.0
 Identities = 292/329 (88%), Positives = 305/329 (92%)
 Frame = +3

Query: 51   SEKMTGGGEGASRTSYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAI 230
            +EKM GG  GASRTSYQR+P+VRIREMKDDYLKFELRDTDAS+ANALRRVMLAEVPTIAI
Sbjct: 2    AEKMLGGA-GASRTSYQRYPRVRIREMKDDYLKFELRDTDASMANALRRVMLAEVPTIAI 60

Query: 231  DLVEIEVNSSVLNDEFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSV 410
            DLVEIEVNSSVLNDEFIAHRLGLIPLTSDDAMSMRFSR+CDACDGDGQCEFCSVEFFLSV
Sbjct: 61   DLVEIEVNSSVLNDEFIAHRLGLIPLTSDDAMSMRFSRDCDACDGDGQCEFCSVEFFLSV 120

Query: 411  RCDSDQTLDVTSLDLQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRL 590
            RCDSDQTLDVTS DLQSTNPRVCPVDVAAN              +GI+IVKLRRGQELRL
Sbjct: 121  RCDSDQTLDVTSADLQSTNPRVCPVDVAANALSSAADGYESAEQKGIIIVKLRRGQELRL 180

Query: 591  RAIARKGIGKDHAKWSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDP 770
            RAIARKGIGKDHAKWSPAATVTFMYEPQIHINEDLMETLTLE+KRSWVESSPTKVF IDP
Sbjct: 181  RAIARKGIGKDHAKWSPAATVTFMYEPQIHINEDLMETLTLEDKRSWVESSPTKVFGIDP 240

Query: 771  NTQQVVVVDPEAYTYDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNA 950
            NTQQ+VV+D EAYTYDDEVIKKA+AMGK GL+EIY KEDSFIFTVESTGAIKAS LV NA
Sbjct: 241  NTQQLVVIDAEAYTYDDEVIKKAEAMGKPGLIEIYPKEDSFIFTVESTGAIKASHLVINA 300

Query: 951  IDVLKQKLDAVRLQDEESDMKELTSHLGN 1037
            ID+LKQKLDAVRLQDEESDMKELTSHLGN
Sbjct: 301  IDILKQKLDAVRLQDEESDMKELTSHLGN 329


>ref|XP_010943195.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Elaeis guineensis]
          Length = 323

 Score =  521 bits (1342), Expect = 0.0
 Identities = 263/318 (82%), Positives = 288/318 (90%), Gaps = 1/318 (0%)
 Frame = +3

Query: 81   ASRTSYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVNSS 260
            A R SYQRFPKVRIRE+KDDY+KFELR+TDASIANALRRVMLAEVPT+AIDLVEIEVNSS
Sbjct: 2    AERVSYQRFPKVRIRELKDDYVKFELRETDASIANALRRVMLAEVPTLAIDLVEIEVNSS 61

Query: 261  VLNDEFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTLDV 440
            VLNDEFIAHRLGLIPLTSDDAM MRFSR+CD+CDGDGQC++CSVEF L+VRCDSDQTLDV
Sbjct: 62   VLNDEFIAHRLGLIPLTSDDAMGMRFSRDCDSCDGDGQCDYCSVEFHLNVRCDSDQTLDV 121

Query: 441  TSLDLQSTNPRVCPVDVAANXXXXXXXXXXXXXX-RGILIVKLRRGQELRLRAIARKGIG 617
            TS DL+ST+P VCPVDVA                 RGILIVKLRRGQELRLRAIARKGIG
Sbjct: 122  TSADLRSTSPTVCPVDVAHRVLASADPNSFDSSDQRGILIVKLRRGQELRLRAIARKGIG 181

Query: 618  KDHAKWSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVD 797
            KDHAKWSPAATVTF+YEPQIHINE+LMETLTLEEKR WVESSPT+VF +DPNTQQVVVVD
Sbjct: 182  KDHAKWSPAATVTFLYEPQIHINEELMETLTLEEKRGWVESSPTRVFGMDPNTQQVVVVD 241

Query: 798  PEAYTYDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKLD 977
            PEAYTYD+EVIKKA+AMGK GLVEIY KEDSFIFTVESTGAI+ASQLV NA++VL+QKLD
Sbjct: 242  PEAYTYDEEVIKKAEAMGKPGLVEIYPKEDSFIFTVESTGAIRASQLVINALEVLRQKLD 301

Query: 978  AVRLQDEESDMKELTSHL 1031
            AVRLQ++ESD  EL++HL
Sbjct: 302  AVRLQEDESDFGELSAHL 319


>ref|XP_020109766.1| DNA-directed RNA polymerases II, IV and V subunit 3-like, partial
            [Ananas comosus]
          Length = 327

 Score =  521 bits (1342), Expect = 0.0
 Identities = 263/323 (81%), Positives = 291/323 (90%), Gaps = 1/323 (0%)
 Frame = +3

Query: 66   GGGEGASRTSYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEI 245
            GGG G    SYQRFPKVRIRE++D+Y KFELR+TDAS+ANALRRVMLAEVPT+AIDLVE+
Sbjct: 2    GGGGGGGGASYQRFPKVRIRELRDEYAKFELRETDASVANALRRVMLAEVPTVAIDLVEV 61

Query: 246  EVNSSVLNDEFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSD 425
            EVNSSVLNDEFIAHRLGL+PLTSD AM+MRFSR+CDACDGDGQCE+CSVEF L+VRCD+D
Sbjct: 62   EVNSSVLNDEFIAHRLGLVPLTSDAAMAMRFSRDCDACDGDGQCEYCSVEFHLAVRCDAD 121

Query: 426  QTLDVTSLDLQSTNPRVCPVDVA-ANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIA 602
            QTLDVTS DL+ST+P+VCPVDVA A               RGI+IVKLRRGQELRLRAIA
Sbjct: 122  QTLDVTSADLRSTDPKVCPVDVARALDADPTSYDSTAADQRGIIIVKLRRGQELRLRAIA 181

Query: 603  RKGIGKDHAKWSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQ 782
            RKGIGKDHAKWSPAATVTFMYEP IHINE++METLTLEEK SWVESSPTKVFDIDPNTQQ
Sbjct: 182  RKGIGKDHAKWSPAATVTFMYEPSIHINEEMMETLTLEEKSSWVESSPTKVFDIDPNTQQ 241

Query: 783  VVVVDPEAYTYDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVL 962
            VVV+DPEAYTYDDEVIKKA+AMGK GLVEIY KEDSFIFTVESTGAIKASQLV NAI+VL
Sbjct: 242  VVVIDPEAYTYDDEVIKKAEAMGKPGLVEIYPKEDSFIFTVESTGAIKASQLVINAIEVL 301

Query: 963  KQKLDAVRLQDEESDMKELTSHL 1031
            +QKLDAVRLQ E++D+ EL++HL
Sbjct: 302  RQKLDAVRLQ-EDTDLGELSAHL 323


>gb|OAY65904.1| DNA-directed RNA polymerases II, IV and V subunit 3 [Ananas comosus]
          Length = 378

 Score =  518 bits (1334), Expect = 0.0
 Identities = 266/344 (77%), Positives = 297/344 (86%), Gaps = 10/344 (2%)
 Frame = +3

Query: 30   RGSPRCESEKMTGGG---------EGASRTSYQRFPKVRIREMKDDYLKFELRDTDASIA 182
            R   R + +K+ GGG          G    SYQRFPKVRIRE++D+Y KFELR+TDAS+A
Sbjct: 32   RAKQRKKKKKVGGGGWTAAAGAAGVGGGGASYQRFPKVRIRELRDEYAKFELRETDASVA 91

Query: 183  NALRRVMLAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSDDAMSMRFSRECDACD 362
            NALRRVMLAEVPT+AIDLVE+EVNSSVLNDEFIAHRLGL+PLTSD AM+MRFSR+CDACD
Sbjct: 92   NALRRVMLAEVPTVAIDLVEVEVNSSVLNDEFIAHRLGLVPLTSDAAMAMRFSRDCDACD 151

Query: 363  GDGQCEFCSVEFFLSVRCDSDQTLDVTSLDLQSTNPRVCPVDVA-ANXXXXXXXXXXXXX 539
            GDGQCE+CSVEF L+VRCD+DQTLDVTS DL+ST+P+VCPVDVA A              
Sbjct: 152  GDGQCEYCSVEFHLAVRCDADQTLDVTSADLRSTDPKVCPVDVARALDADPTSYDSTAAD 211

Query: 540  XRGILIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPQIHINEDLMETLTLEE 719
             RGI+IVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP IHINE++METLTLEE
Sbjct: 212  QRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEEMMETLTLEE 271

Query: 720  KRSWVESSPTKVFDIDPNTQQVVVVDPEAYTYDDEVIKKADAMGKSGLVEIYAKEDSFIF 899
            K SWVESSPTKVFDIDPNTQQVVV+DPEAYTYDDEVIKKA+AMGK GLVEIY KEDSFIF
Sbjct: 272  KSSWVESSPTKVFDIDPNTQQVVVIDPEAYTYDDEVIKKAEAMGKPGLVEIYPKEDSFIF 331

Query: 900  TVESTGAIKASQLVSNAIDVLKQKLDAVRLQDEESDMKELTSHL 1031
            TVESTGAIKASQLV NAI+VL+QKLDAVRLQ E++D+ EL++HL
Sbjct: 332  TVESTGAIKASQLVINAIEVLRQKLDAVRLQ-EDTDLGELSAHL 374


>ref|XP_020673703.1| DNA-directed RNA polymerases II, IV and V subunit 3-like [Dendrobium
            catenatum]
          Length = 322

 Score =  514 bits (1324), Expect = e-180
 Identities = 259/315 (82%), Positives = 283/315 (89%), Gaps = 1/315 (0%)
 Frame = +3

Query: 93   SYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVNSSVLND 272
            SYQRFPKV+IREMKDDY+KFELR+TDAS+ANALRRVM+AEVPTIAIDLVEIE NSSVLND
Sbjct: 5    SYQRFPKVKIREMKDDYMKFELRETDASMANALRRVMIAEVPTIAIDLVEIEANSSVLND 64

Query: 273  EFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTLDVTSLD 452
            EFIAHRLGLIPL SDDAM MRFSR+CDACDGDGQCE+CSVEF L+VRCDSDQTLDVTS D
Sbjct: 65   EFIAHRLGLIPLVSDDAMGMRFSRDCDACDGDGQCEYCSVEFHLNVRCDSDQTLDVTSND 124

Query: 453  LQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGIGKDHAK 632
            L+ST PRV PVDVA                RGI+IVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 125  LRSTEPRVIPVDVATRSLASESGGFDSPDQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 184

Query: 633  WSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPEAYT 812
            WSPAATVTFMYEP+IHINE+LMETLTL+EKR+W+ESSPTKVFDIDPNT QV VVDPEAYT
Sbjct: 185  WSPAATVTFMYEPEIHINEELMETLTLDEKRTWIESSPTKVFDIDPNTYQVRVVDPEAYT 244

Query: 813  YDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKLDAVRLQ 992
            YD+EVIKKA+AMGK GLVEIYAKEDSFIFTVESTGAIK+ Q+V NAI++LKQKLDAVRLQ
Sbjct: 245  YDEEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKSYQMVINAIEILKQKLDAVRLQ 304

Query: 993  DE-ESDMKELTSHLG 1034
            D  ++D+ ELT HLG
Sbjct: 305  DTVDADIGELTQHLG 319


>ref|XP_020593275.1| DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Phalaenopsis equestris]
          Length = 323

 Score =  513 bits (1321), Expect = e-180
 Identities = 258/315 (81%), Positives = 284/315 (90%), Gaps = 1/315 (0%)
 Frame = +3

Query: 93   SYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVNSSVLND 272
            SYQRFPKV+IREMKDDY+KFEL++TDAS+ANALRRVM+AEVPTIAIDLVEIE NSSVLND
Sbjct: 5    SYQRFPKVKIREMKDDYMKFELQETDASMANALRRVMIAEVPTIAIDLVEIEANSSVLND 64

Query: 273  EFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTLDVTSLD 452
            EFIAHRLGLIPL SDDAM MRFSR+CDACDGDGQCE+CSVEF L+VRCDSDQTLDVTS D
Sbjct: 65   EFIAHRLGLIPLVSDDAMGMRFSRDCDACDGDGQCEYCSVEFHLNVRCDSDQTLDVTSND 124

Query: 453  LQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGIGKDHAK 632
            L+ST PRV PVDVAA               RGI+IVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 125  LRSTEPRVVPVDVAARTLASETGDFDSQDQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 184

Query: 633  WSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPEAYT 812
            WSPAATVTFMYEP+IHINE+LMETLTL+EKRSW+ESSPTKVFDIDPNT QV V+DPEAYT
Sbjct: 185  WSPAATVTFMYEPEIHINEELMETLTLDEKRSWIESSPTKVFDIDPNTYQVRVLDPEAYT 244

Query: 813  YDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKLDAVRLQ 992
            YD+EVIKKA+AMGK GL+EI AKEDSFIFTVESTGAIK+ Q+V+NAI++LKQKLDAVRLQ
Sbjct: 245  YDEEVIKKAEAMGKPGLIEISAKEDSFIFTVESTGAIKSYQMVANAIEILKQKLDAVRLQ 304

Query: 993  D-EESDMKELTSHLG 1034
            D EE+D+ EL  HLG
Sbjct: 305  DSEEADIGELAQHLG 319


>gb|PKA55547.1| DNA-directed RNA polymerase II subunit RPB3-A [Apostasia shenzhenica]
          Length = 320

 Score =  511 bits (1316), Expect = e-179
 Identities = 260/316 (82%), Positives = 285/316 (90%), Gaps = 2/316 (0%)
 Frame = +3

Query: 93   SYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVNSSVLND 272
            SYQRFP+++IREMKDDY+KFELRDTDAS+ANALRRVM++EVPTIAIDLVEIEVNSSVLND
Sbjct: 5    SYQRFPQIKIREMKDDYMKFELRDTDASMANALRRVMISEVPTIAIDLVEIEVNSSVLND 64

Query: 273  EFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTLDVTSLD 452
            EFIAHRLGLIPL S+DAM MRFSR+CDACDGDGQCE+CSVEF L+V CDSDQTLDVTS D
Sbjct: 65   EFIAHRLGLIPLISEDAMGMRFSRDCDACDGDGQCEYCSVEFHLNVLCDSDQTLDVTSSD 124

Query: 453  LQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGIGKDHAK 632
            L+ST PRVCPVDVAA               +GI+IVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 125  LRSTEPRVCPVDVAARAFASEIGGYDSPDHKGIIIVKLRRGQELRLRAIARKGIGKDHAK 184

Query: 633  WSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPEAYT 812
            WSPAATVTFMYEP IHINE+LMETLTLEEKRSWVESSPT+VFDIDP TQQV VVD EAYT
Sbjct: 185  WSPAATVTFMYEPDIHINEELMETLTLEEKRSWVESSPTRVFDIDPVTQQVKVVDAEAYT 244

Query: 813  YDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKLDAVRLQ 992
            YD+EVIKKA+AMGK GLVEIYAKEDSFIFTVESTGA+KA Q+V NAI+VLKQKLDAVRLQ
Sbjct: 245  YDEEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAVKAYQMVINAIEVLKQKLDAVRLQ 304

Query: 993  D-EESDM-KELTSHLG 1034
            D EE+D+ ++LT HLG
Sbjct: 305  DAEEADIGEQLTQHLG 320


>ref|XP_010241296.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Nelumbo nucifera]
          Length = 321

 Score =  504 bits (1298), Expect = e-176
 Identities = 258/314 (82%), Positives = 276/314 (87%)
 Frame = +3

Query: 93   SYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVNSSVLND 272
            SYQRFPKV+IREMKDDYLKF+LR+TDAS+ANALRRVMLAEVPTIAIDLVEIEVNSSVLND
Sbjct: 5    SYQRFPKVKIREMKDDYLKFDLRETDASMANALRRVMLAEVPTIAIDLVEIEVNSSVLND 64

Query: 273  EFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTLDVTSLD 452
            EFIAHRLGLIPLTSD AM MRFSR+CDACDGDGQCE+CSVEF L VRCDSDQTLDVTS D
Sbjct: 65   EFIAHRLGLIPLTSDRAMGMRFSRDCDACDGDGQCEYCSVEFHLKVRCDSDQTLDVTSHD 124

Query: 453  LQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGIGKDHAK 632
            L+S++P V PVDVA                RGILIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 125  LKSSDPSVVPVDVAQ---YAESGGYDASEQRGILIVKLRRGQELRLRAIARKGIGKDHAK 181

Query: 633  WSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPEAYT 812
            WSPAATVTFMYEP+ HINEDLMETLTLEEKR W+ESSPT+VFDIDPNT QVVVVDPEAYT
Sbjct: 182  WSPAATVTFMYEPEFHINEDLMETLTLEEKRDWIESSPTRVFDIDPNTHQVVVVDPEAYT 241

Query: 813  YDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKLDAVRLQ 992
            YDDEVIKKA+AMGK GLVEIYAKEDSFIFTVESTG IKASQ+V NAI+VLKQKLDAVRL 
Sbjct: 242  YDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGTIKASQMVINAIEVLKQKLDAVRLS 301

Query: 993  DEESDMKELTSHLG 1034
            +E  +  +    LG
Sbjct: 302  EETEEADDQFGELG 315


>ref|XP_020265573.1| DNA-directed RNA polymerases II, IV and V subunit 3-like [Asparagus
            officinalis]
          Length = 322

 Score =  504 bits (1297), Expect = e-176
 Identities = 260/317 (82%), Positives = 281/317 (88%), Gaps = 3/317 (0%)
 Frame = +3

Query: 93   SYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVNSSVLND 272
            SYQRFPKVRIREMKD+Y KFELR+TDAS+ANALRRVM+AEVPT+AIDLVEIEVNSSVLND
Sbjct: 6    SYQRFPKVRIREMKDEYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLND 65

Query: 273  EFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTLDVTSLD 452
            EFIAHRLGLIPLTSD+AM MRFSR+CD+CDGDGQCEFCSVEF L+V CDSDQTLDVTS D
Sbjct: 66   EFIAHRLGLIPLTSDNAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVCCDSDQTLDVTSAD 125

Query: 453  LQSTNPRVCPVDVA--ANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGIGKDH 626
            L+S    V PVD+A  A               RGI+IVKLRRGQELRLRAIARKGIGKDH
Sbjct: 126  LRSAEASVIPVDLAVKALAMESSSTSYEAAEQRGIIIVKLRRGQELRLRAIARKGIGKDH 185

Query: 627  AKWSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPEA 806
            AKWSPAATVTFMYEP IHINEDLMETL+L+EKR+W+ESSPTKVFD+DPNT QVVVVDPEA
Sbjct: 186  AKWSPAATVTFMYEPDIHINEDLMETLSLDEKRAWIESSPTKVFDLDPNTGQVVVVDPEA 245

Query: 807  YTYDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKLDAVR 986
            YTYDDEVIKKA+AMGK GLVEI AKEDSFIFTVESTGAIKASQLV NAIDVL+QKLDAVR
Sbjct: 246  YTYDDEVIKKAEAMGKPGLVEINAKEDSFIFTVESTGAIKASQLVLNAIDVLRQKLDAVR 305

Query: 987  LQD-EESDMKELTSHLG 1034
            LQD EE+D  EL +HLG
Sbjct: 306  LQDAEENDFSELKAHLG 322


>gb|ONK70315.1| uncharacterized protein A4U43_C05F32460 [Asparagus officinalis]
          Length = 373

 Score =  504 bits (1297), Expect = e-175
 Identities = 260/317 (82%), Positives = 281/317 (88%), Gaps = 3/317 (0%)
 Frame = +3

Query: 93   SYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVNSSVLND 272
            SYQRFPKVRIREMKD+Y KFELR+TDAS+ANALRRVM+AEVPT+AIDLVEIEVNSSVLND
Sbjct: 57   SYQRFPKVRIREMKDEYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLND 116

Query: 273  EFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTLDVTSLD 452
            EFIAHRLGLIPLTSD+AM MRFSR+CD+CDGDGQCEFCSVEF L+V CDSDQTLDVTS D
Sbjct: 117  EFIAHRLGLIPLTSDNAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVCCDSDQTLDVTSAD 176

Query: 453  LQSTNPRVCPVDVA--ANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGIGKDH 626
            L+S    V PVD+A  A               RGI+IVKLRRGQELRLRAIARKGIGKDH
Sbjct: 177  LRSAEASVIPVDLAVKALAMESSSTSYEAAEQRGIIIVKLRRGQELRLRAIARKGIGKDH 236

Query: 627  AKWSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPEA 806
            AKWSPAATVTFMYEP IHINEDLMETL+L+EKR+W+ESSPTKVFD+DPNT QVVVVDPEA
Sbjct: 237  AKWSPAATVTFMYEPDIHINEDLMETLSLDEKRAWIESSPTKVFDLDPNTGQVVVVDPEA 296

Query: 807  YTYDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKLDAVR 986
            YTYDDEVIKKA+AMGK GLVEI AKEDSFIFTVESTGAIKASQLV NAIDVL+QKLDAVR
Sbjct: 297  YTYDDEVIKKAEAMGKPGLVEINAKEDSFIFTVESTGAIKASQLVLNAIDVLRQKLDAVR 356

Query: 987  LQD-EESDMKELTSHLG 1034
            LQD EE+D  EL +HLG
Sbjct: 357  LQDAEENDFSELKAHLG 373


>ref|XP_010275045.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Nelumbo nucifera]
          Length = 321

 Score =  497 bits (1279), Expect = e-173
 Identities = 254/314 (80%), Positives = 275/314 (87%)
 Frame = +3

Query: 93   SYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVNSSVLND 272
            SYQRFPKV+IREMKDDYLKFELR+TDASIANALRRVM+AEVPTIAIDLVEIE NSSVLND
Sbjct: 5    SYQRFPKVKIREMKDDYLKFELRETDASIANALRRVMIAEVPTIAIDLVEIEGNSSVLND 64

Query: 273  EFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTLDVTSLD 452
            EFIAHRLGLIPLTS+ AM MRFSR+CDACDGDGQCE+CSVEF L VRCD+DQTLDVTS D
Sbjct: 65   EFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLHVRCDTDQTLDVTSYD 124

Query: 453  LQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGIGKDHAK 632
            L+S++P V PVDVA +              RGI+IVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 125  LRSSDPSVVPVDVAQHSESTGYDASEQ---RGIIIVKLRRGQELRLRAIARKGIGKDHAK 181

Query: 633  WSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPEAYT 812
            WSPAATVTFMYEP+IHINEDLMETLTL+EKR W+ESSPTKVF +DPNT QVVVVDPEAYT
Sbjct: 182  WSPAATVTFMYEPEIHINEDLMETLTLDEKRDWIESSPTKVFGLDPNTHQVVVVDPEAYT 241

Query: 813  YDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKLDAVRLQ 992
            YDDEVIKKA+AMGK GLVEIYAKEDSFIFTVESTGAIKASQLV NAI+VLKQKLD VR  
Sbjct: 242  YDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVVNAIEVLKQKLDVVRPS 301

Query: 993  DEESDMKELTSHLG 1034
            +E  +  +    LG
Sbjct: 302  EETEEADDQFGELG 315


>ref|XP_006853170.1| DNA-directed RNA polymerases II, IV and V subunit 3 [Amborella
            trichopoda]
 gb|ERN14637.1| hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda]
          Length = 324

 Score =  491 bits (1265), Expect = e-171
 Identities = 255/317 (80%), Positives = 278/317 (87%), Gaps = 4/317 (1%)
 Frame = +3

Query: 93   SYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVNSSVLND 272
            SYQRFPKV+IREMKDDYLKFELR+TD S+ANALRR+MLAEVPTIAIDLVEIE NSSVLND
Sbjct: 5    SYQRFPKVKIREMKDDYLKFELRETDPSMANALRRIMLAEVPTIAIDLVEIEANSSVLND 64

Query: 273  EFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTLDVTSLD 452
            EF+AHRLGLIPLTS+ AMSMRFSR+CDACDGDGQCE+CSVEF LSV+CDSDQTLDVTS D
Sbjct: 65   EFLAHRLGLIPLTSEKAMSMRFSRDCDACDGDGQCEYCSVEFQLSVKCDSDQTLDVTSAD 124

Query: 453  LQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGIGKDHAK 632
            L S++  V PVDVA                RGI+IVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 125  LVSSDIHVIPVDVAGRGMDSNGFDASEQ--RGIIIVKLRRGQELRLRAIARKGIGKDHAK 182

Query: 633  WSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPEAYT 812
            WSP ATVTFMYEP+IHIN+DLMETL+L+EKR WVESSPT+VFDIDPNT QVVVVDPEAYT
Sbjct: 183  WSPGATVTFMYEPEIHINDDLMETLSLDEKREWVESSPTRVFDIDPNTHQVVVVDPEAYT 242

Query: 813  YDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKLDAVR-- 986
            YDDEVIKKA+AMGK GLVEIYA+EDSFIFTVESTGAIKASQLV NAI+VLKQKLDAVR  
Sbjct: 243  YDDEVIKKAEAMGKPGLVEIYAREDSFIFTVESTGAIKASQLVINAIEVLKQKLDAVRLS 302

Query: 987  LQDEESDMK--ELTSHL 1031
            L  EE D +  EL +H+
Sbjct: 303  LDTEEGDEQFGELGAHM 319


>gb|OVA02066.1| DNA-directed RNA polymerase [Macleaya cordata]
          Length = 419

 Score =  495 bits (1274), Expect = e-171
 Identities = 249/308 (80%), Positives = 273/308 (88%)
 Frame = +3

Query: 93   SYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVNSSVLND 272
            SYQRFPK++IREMKDDY+KFELR+TD S+ANALRRVM+AEVPTIAIDLVEIEVNS+VLND
Sbjct: 5    SYQRFPKIKIREMKDDYMKFELRETDPSMANALRRVMIAEVPTIAIDLVEIEVNSTVLND 64

Query: 273  EFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTLDVTSLD 452
            EFIAHRLGLIPLTS+ AM MRFSR+CDACDGDGQCE+CSVEF LSVRCD DQTLDVTS D
Sbjct: 65   EFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDVTSAD 124

Query: 453  LQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGIGKDHAK 632
            L S++P V PVDVAA               RGI+IVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 125  LLSSDPSVVPVDVAARSTSSGYDASEN---RGIIIVKLRRGQELRLRAIARKGIGKDHAK 181

Query: 633  WSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPEAYT 812
            WSP ATVTFMYEP IHINED+ME LTLEEK+SW+ESSPTKVFDIDPNTQQVVVVDPEAYT
Sbjct: 182  WSPTATVTFMYEPDIHINEDMMERLTLEEKQSWIESSPTKVFDIDPNTQQVVVVDPEAYT 241

Query: 813  YDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKLDAVRLQ 992
            YDDEVIKKA+AMGK GLVEIY +EDSFIFTVESTGA+KASQ+V NAI+VLKQKLDAVRL 
Sbjct: 242  YDDEVIKKAEAMGKPGLVEIYGREDSFIFTVESTGAVKASQVVINAIEVLKQKLDAVRLS 301

Query: 993  DEESDMKE 1016
            ++  +  E
Sbjct: 302  EDTEEADE 309


>ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Gossypium raimondii]
 ref|XP_017634647.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Gossypium arboreum]
 gb|KHG04309.1| DNA-directed RNA polymerase II subunit RPB3-A -like protein
            [Gossypium arboreum]
 gb|KJB47376.1| hypothetical protein B456_008G023500 [Gossypium raimondii]
          Length = 318

 Score =  488 bits (1257), Expect = e-170
 Identities = 252/314 (80%), Positives = 274/314 (87%)
 Frame = +3

Query: 93   SYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVNSSVLND 272
            SYQRFPKV+IRE+KDDY KFELRDTDAS+ANALRRVM++EVPTIAIDLVEIEVNSSVLND
Sbjct: 5    SYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMISEVPTIAIDLVEIEVNSSVLND 64

Query: 273  EFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTLDVTSLD 452
            EFIAHRLGLIPLTS+ AMSMRFSR+CDACDGDGQCEFCSVEF L  +C SDQTLDVTS D
Sbjct: 65   EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDVTSKD 124

Query: 453  LQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGIGKDHAK 632
            L S++  V PVD   N              RGI+IVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 125  LYSSDHTVVPVDFTDNAGYDSTEP------RGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 633  WSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPEAYT 812
            WSPAATVTFMYEP+IHINEDLME+LTLEEK S+VESSPTKVFDIDPNTQQVVVVDPEAYT
Sbjct: 179  WSPAATVTFMYEPEIHINEDLMESLTLEEKLSFVESSPTKVFDIDPNTQQVVVVDPEAYT 238

Query: 813  YDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKLDAVRLQ 992
            YDDEV+KKA+AMGK GLVEIYAKEDSFIFTVESTGAIKASQLV NAI++LKQKLDAVRL 
Sbjct: 239  YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLS 298

Query: 993  DEESDMKELTSHLG 1034
            ++  +  +    LG
Sbjct: 299  EDTVEADDQFGELG 312


>ref|XP_007042502.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Theobroma cacao]
 gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
          Length = 318

 Score =  488 bits (1255), Expect = e-170
 Identities = 251/314 (79%), Positives = 275/314 (87%)
 Frame = +3

Query: 93   SYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVNSSVLND 272
            SYQRFPKV+IRE+KDDY KFELRDTDAS+ANALRRVM+AEVPTIAIDLVEIEVNSSVLND
Sbjct: 5    SYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLND 64

Query: 273  EFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTLDVTSLD 452
            EFIAHRLGLIPLTS+ AMSMRFSR+CDACDGDGQCEFCSVEF L  +C +DQTLDVTS D
Sbjct: 65   EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDVTSKD 124

Query: 453  LQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGIGKDHAK 632
            L S++  V PVD   +              RGI+IVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 125  LYSSDHTVVPVDFTDSAGYDSSEQ------RGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 633  WSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPEAYT 812
            WSPAATVTFMYEP+IHINED+METLTLEEK+S+VESSPT+VFDIDPNTQQVVVVDPEAYT
Sbjct: 179  WSPAATVTFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVVDPEAYT 238

Query: 813  YDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKLDAVRLQ 992
            YDDEV+KKA+AMGK GLVEIYAKEDSFIFTVESTGAIKASQLV NAI+VLKQKLDAVRL 
Sbjct: 239  YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLS 298

Query: 993  DEESDMKELTSHLG 1034
            ++  +  +    LG
Sbjct: 299  EDTVEADDQFGELG 312


>ref|XP_010065975.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Eucalyptus grandis]
 gb|KCW63722.1| hypothetical protein EUGRSUZ_G01370 [Eucalyptus grandis]
          Length = 321

 Score =  486 bits (1251), Expect = e-169
 Identities = 250/320 (78%), Positives = 274/320 (85%)
 Frame = +3

Query: 75   EGASRTSYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVN 254
            EG    SYQRFP V++RE KDDYLKFELR TDAS+ANALRRVM+AEVPTIAIDLVEIEVN
Sbjct: 2    EGGGGASYQRFPVVKVRETKDDYLKFELRGTDASVANALRRVMIAEVPTIAIDLVEIEVN 61

Query: 255  SSVLNDEFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTL 434
            SSVLNDEFIAHRLGL+PLTSD AMSMRFSR+CDACDGDGQCEFCSVEF L  +C +DQTL
Sbjct: 62   SSVLNDEFIAHRLGLVPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTL 121

Query: 435  DVTSLDLQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGI 614
            DVTS DL S++  V PVD +                +GI IVKLRRGQELRLRAIARKGI
Sbjct: 122  DVTSKDLISSDHTVVPVDFS------DALADDSAEQKGITIVKLRRGQELRLRAIARKGI 175

Query: 615  GKDHAKWSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVV 794
            GKDHAKWSPAATVTFMYEP+IHINEDL+ETL+LEEK+SWVESSPTKVFDIDPNT+QV+VV
Sbjct: 176  GKDHAKWSPAATVTFMYEPEIHINEDLVETLSLEEKQSWVESSPTKVFDIDPNTEQVLVV 235

Query: 795  DPEAYTYDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKL 974
            DPEAYTYD+EVIKKA+AMGK GLVEIYAKEDSFIFTVESTGAIKASQLV NAIDVLKQKL
Sbjct: 236  DPEAYTYDEEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKL 295

Query: 975  DAVRLQDEESDMKELTSHLG 1034
            DAVRL ++  +  +    LG
Sbjct: 296  DAVRLSEDTVEADDQFGELG 315


>gb|PIA27129.1| hypothetical protein AQUCO_08300072v1 [Aquilegia coerulea]
          Length = 324

 Score =  486 bits (1251), Expect = e-169
 Identities = 249/321 (77%), Positives = 278/321 (86%)
 Frame = +3

Query: 72   GEGASRTSYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEV 251
            G GAS    QRFPK++IREMKD+YLKFELR+TDAS+ANALRRVM+AEVPTIAIDLVEIEV
Sbjct: 4    GGGASN---QRFPKIKIREMKDEYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEV 60

Query: 252  NSSVLNDEFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQT 431
            NSSVLNDEFI+HRLGLIPLTSD AM MRFSR+CDACDGDGQCE CSVEF L VRCD DQT
Sbjct: 61   NSSVLNDEFISHRLGLIPLTSDRAMGMRFSRDCDACDGDGQCEHCSVEFHLDVRCDQDQT 120

Query: 432  LDVTSLDLQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKG 611
            LDVTS DL ST+P V PVDVAA               +GI+IVKLRRGQELRLRAIARKG
Sbjct: 121  LDVTSADLISTDPSVIPVDVAAKSSSSAYDASEN---KGIIIVKLRRGQELRLRAIARKG 177

Query: 612  IGKDHAKWSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVV 791
            IGKDHAKWSPAATVTFMYEP+I INE++ME+L++++KRSW+ESSPTKVFDIDPNTQQVVV
Sbjct: 178  IGKDHAKWSPAATVTFMYEPEIRINEEMMESLSIDDKRSWIESSPTKVFDIDPNTQQVVV 237

Query: 792  VDPEAYTYDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQK 971
            VDPEAYTYD+EVIKKA+AMGK GL+EI AKEDSFIFTVESTGA+KAS+LV NAI+VLKQK
Sbjct: 238  VDPEAYTYDEEVIKKAEAMGKPGLIEIEAKEDSFIFTVESTGAVKASKLVVNAIEVLKQK 297

Query: 972  LDAVRLQDEESDMKELTSHLG 1034
            LDAVRL D+  +  +    LG
Sbjct: 298  LDAVRLSDDTVEADDQFGELG 318


>ref|XP_022726703.1| DNA-directed RNA polymerases II, IV and V subunit 3 [Durio
            zibethinus]
          Length = 318

 Score =  486 bits (1250), Expect = e-169
 Identities = 251/314 (79%), Positives = 274/314 (87%)
 Frame = +3

Query: 93   SYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVNSSVLND 272
            SYQRFPKV+IRE+KDDY KFELRDTDAS+ANALRRVM+AEVPTIAIDLVEIEVNSSVLND
Sbjct: 5    SYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLND 64

Query: 273  EFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTLDVTSLD 452
            EFIAHRLGLIPLTS+ AMSMRFSR+CDACDGDGQCEFCSVEF L  +C +DQTLDVTS D
Sbjct: 65   EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMNDQTLDVTSKD 124

Query: 453  LQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGIGKDHAK 632
            L S++  V PVD   +              RGI+IVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 125  LYSSDHTVVPVDFTDSAGYDSSEQ------RGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 633  WSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPEAYT 812
            WSPAATVTFMYE +IHINEDLMETLTLEEK+S+VESSPT+VFDIDPNTQQVVVVDPEAYT
Sbjct: 179  WSPAATVTFMYEAEIHINEDLMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVVDPEAYT 238

Query: 813  YDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKLDAVRLQ 992
            YDDEVIKKA+AMGK GLVEIYAKEDSFIFTVESTGAIKASQLV NAI++LKQKLDAVRL 
Sbjct: 239  YDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLS 298

Query: 993  DEESDMKELTSHLG 1034
            ++  +  +    LG
Sbjct: 299  EDTVEADDQFGELG 312


>ref|XP_006422955.1| DNA-directed RNA polymerases II, IV and V subunit 3 [Citrus
            clementina]
 ref|XP_006487022.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Citrus sinensis]
 gb|ESR36195.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
 gb|KDO59794.1| hypothetical protein CISIN_1g020936mg [Citrus sinensis]
 gb|KDO59795.1| hypothetical protein CISIN_1g020936mg [Citrus sinensis]
 dbj|GAY54950.1| hypothetical protein CUMW_160720 [Citrus unshiu]
          Length = 319

 Score =  485 bits (1248), Expect = e-169
 Identities = 251/314 (79%), Positives = 271/314 (86%)
 Frame = +3

Query: 93   SYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVNSSVLND 272
            SYQRFPKV+IRE+KDDY KFELRDTDAS+ANALRRVM+AEVPTIAIDLVEIEVNSSVLND
Sbjct: 5    SYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLND 64

Query: 273  EFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTLDVTSLD 452
            EFIAHRLGLIPLTS+ AMSMRFSR+CDACDGDGQCEFCSVEF L  +C SDQTLDVTS D
Sbjct: 65   EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKD 124

Query: 453  LQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGIGKDHAK 632
            L S++  V PVD                  RGI+IVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 125  LYSSDHSVVPVDFV-----DPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 179

Query: 633  WSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPEAYT 812
            WSPAATVTFMYEP+IHINEDLME+L+LEEK+SWVESSPTKVFDIDPNT QV VVD EAYT
Sbjct: 180  WSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYT 239

Query: 813  YDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKLDAVRLQ 992
            YDDEVIKKA+AMGK GLVEIYAKEDSFIFTVESTGAIKASQLV NAI+VLKQKLDAVRL 
Sbjct: 240  YDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLS 299

Query: 993  DEESDMKELTSHLG 1034
            ++  +  +    LG
Sbjct: 300  EDTVEADDQFGELG 313


>ref|XP_022147788.1| DNA-directed RNA polymerases II, IV and V subunit 3-like [Momordica
            charantia]
 ref|XP_022147789.1| DNA-directed RNA polymerases II, IV and V subunit 3-like [Momordica
            charantia]
          Length = 320

 Score =  484 bits (1245), Expect = e-168
 Identities = 249/320 (77%), Positives = 276/320 (86%)
 Frame = +3

Query: 75   EGASRTSYQRFPKVRIREMKDDYLKFELRDTDASIANALRRVMLAEVPTIAIDLVEIEVN 254
            EGAS   YQRFPKV+IRE++DDY KFELRDTDAS+ANALRRVM+AEVPTIAIDLVEIEVN
Sbjct: 2    EGAS---YQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVN 58

Query: 255  SSVLNDEFIAHRLGLIPLTSDDAMSMRFSRECDACDGDGQCEFCSVEFFLSVRCDSDQTL 434
            SSVLNDEFIAHRLGLIPLTS+ AMSMRFSR+CDACDGDGQCEFCSVEF L  +C SDQTL
Sbjct: 59   SSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTL 118

Query: 435  DVTSLDLQSTNPRVCPVDVAANXXXXXXXXXXXXXXRGILIVKLRRGQELRLRAIARKGI 614
            DVTS DL S++  V PVD A +              +GI+IVKLRRGQELRLRAIARKGI
Sbjct: 119  DVTSKDLISSDHTVVPVDFADSAAASGEVLDT----KGIIIVKLRRGQELRLRAIARKGI 174

Query: 615  GKDHAKWSPAATVTFMYEPQIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVV 794
            GKDHAKWSPAATVTFMYEP IHINEDLMETLTLEE+++WVES PT+VF++DPNT QVVVV
Sbjct: 175  GKDHAKWSPAATVTFMYEPSIHINEDLMETLTLEERKTWVESCPTRVFEVDPNTHQVVVV 234

Query: 795  DPEAYTYDDEVIKKADAMGKSGLVEIYAKEDSFIFTVESTGAIKASQLVSNAIDVLKQKL 974
            DPEAYTYDDEVIKKA+AMGK+GLV+I AKEDSFIFTVESTGAIKASQL+ NAID+LKQKL
Sbjct: 235  DPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKL 294

Query: 975  DAVRLQDEESDMKELTSHLG 1034
            DAVRL D+  +  +    LG
Sbjct: 295  DAVRLSDDTVEADDQFGELG 314