BLASTX nr result
ID: Cheilocostus21_contig00001275
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cheilocostus21_contig00001275 (885 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AHA13000.1| RNA polymerase beta' subunit (plastid) [Costus pu... 493 e-161 gb|AHA12914.1| RNA polymerase beta' subunit (plastid) [Monocostu... 486 e-158 gb|ABD93822.1| RNA polymerase beta chain, partial (chloroplast) ... 454 e-152 ref|YP_007475609.1| RNA polymerase beta' subunit [Heliconia coll... 464 e-150 gb|ABU85465.1| RNA polymerase beta subunit, partial (chloroplast... 460 e-149 emb|CCW72365.1| rpoC2 (chloroplast) [Musa acuminata subsp. malac... 460 e-149 ref|YP_009420563.1| RNA polymerase beta subunit (chloroplast) [M... 458 e-148 ref|YP_009415208.1| RNA polymerase beta' subunit (chloroplast) [... 458 e-148 ref|YP_008854415.1| RNA polymerase beta' subunit [Musa textilis]... 457 e-148 gb|ABD93783.1| RNA polymerase beta chain, partial (chloroplast) ... 443 e-147 gb|AHA13172.1| RNA polymerase beta' subunit (plastid) [Thaumatoc... 451 e-145 gb|ABD93785.1| RNA polymerase beta chain, partial (chloroplast) ... 436 e-144 ref|YP_009462801.1| RNA polymerase beta'' subunit (chloroplast) ... 449 e-144 ref|YP_009459042.1| RNA polymerase beta'' subunit (chloroplast) ... 449 e-144 gb|ABD93784.1| RNA polymerase beta chain, partial (chloroplast) ... 434 e-144 ref|YP_009192952.1| RNA polymerase beta' subunit (chloroplast) [... 446 e-143 gb|ABD93781.1| RNA polymerase beta chain, partial (chloroplast) ... 433 e-143 gb|AGE93360.1| RNA polymerase beta' subunit (plastid) [Alpinia z... 446 e-143 ref|YP_009428967.1| RNA polymerase beta'' subunit (chloroplast) ... 446 e-143 gb|ABD93788.1| RNA polymerase beta chain, partial (chloroplast) ... 432 e-143 >gb|AHA13000.1| RNA polymerase beta' subunit (plastid) [Costus pulverulentus] Length = 1377 Score = 493 bits (1268), Expect = e-161 Identities = 253/270 (93%), Positives = 254/270 (94%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIPKQGILRRKGILAYFDDP YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS Sbjct: 583 IPCFGISIEIPKQGILRRKGILAYFDDPRYRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 642 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER Sbjct: 643 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 702 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKKN+ELKIFSGDIYFPGEADKISRHSGILIPPET WIHVQRITLT Sbjct: 703 KKKNIELKIFSGDIYFPGEADKISRHSGILIPPETEKKNSNSKESKKWKNWIHVQRITLT 762 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN Sbjct: 763 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 822 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV Sbjct: 823 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 852 >gb|AHA12914.1| RNA polymerase beta' subunit (plastid) [Monocostus uniflorus] Length = 1377 Score = 486 bits (1250), Expect = e-158 Identities = 250/270 (92%), Positives = 253/270 (93%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEI KQGILRRKGILAYFDDP YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS Sbjct: 583 IPCFGISIEISKQGILRRKGILAYFDDPRYRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 642 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER Sbjct: 643 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 702 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKKN+EL+IFSGDIYFPGEADKISR+SGILIPPET WIHVQRITLT Sbjct: 703 KKKNIELQIFSGDIYFPGEADKISRYSGILIPPETEKKNSNSKESKKWKNWIHVQRITLT 762 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN Sbjct: 763 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 822 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV Sbjct: 823 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 852 >gb|ABD93822.1| RNA polymerase beta chain, partial (chloroplast) [Philydrum lanuginosum] Length = 772 Score = 454 bits (1168), Expect = e-152 Identities = 234/270 (86%), Positives = 245/270 (90%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIPKQGILRR ILAYFDDP YRRSNSGITKYGT+EVNSIIK+EDL EYRGS Sbjct: 95 IPCFGISIEIPKQGILRRNSILAYFDDPRYRRSNSGITKYGTLEVNSIIKREDLIEYRGS 154 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDT+LALNTRSR+GGLVRVER Sbjct: 155 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTRLALNTRSRIGGLVRVER 214 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKK +ELKIFSG+IYFPGEADKISRHSGILIPPE WI+VQRIT T Sbjct: 215 KKKYIELKIFSGEIYFPGEADKISRHSGILIPPE---MEKNAKESKKLKNWIYVQRITPT 271 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFVSVRPVVTYEIADGINLATLFPQDLLRE++N QLRVVNYILYGNGKSIRGISHT+ Sbjct: 272 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREEDNFQLRVVNYILYGNGKSIRGISHTS 331 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCLVLNWDQEQNG EEVHASF+EV Sbjct: 332 IQLVRTCLVLNWDQEQNGCIEEVHASFVEV 361 >ref|YP_007475609.1| RNA polymerase beta' subunit [Heliconia collinsiana] gb|AGE92674.1| RNA polymerase beta' subunit (plastid) [Heliconia collinsiana] Length = 1384 Score = 464 bits (1195), Expect = e-150 Identities = 242/270 (89%), Positives = 247/270 (91%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIPKQGILRR ILAYFDDP YRRSNSGITKYGTVEVNSIIKKEDL EYRGS Sbjct: 588 IPCFGISIEIPKQGILRRNSILAYFDDPQYRRSNSGITKYGTVEVNSIIKKEDLIEYRGS 647 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEFS KYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER Sbjct: 648 KEFSTKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 707 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKK +ELKIFSGDIYFPGEADKISRHSGILIPPET WI+VQRIT T Sbjct: 708 KKKYIELKIFSGDIYFPGEADKISRHSGILIPPET--EKKNSKESKKWKNWIYVQRITPT 765 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREK+NVQLRVVNYILYGNGKSIRGISHT+ Sbjct: 766 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKDNVQLRVVNYILYGNGKSIRGISHTS 825 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCLVLNWDQEQNGS EEVHASF+EV Sbjct: 826 IQLVRTCLVLNWDQEQNGSPEEVHASFVEV 855 >gb|ABU85465.1| RNA polymerase beta subunit, partial (chloroplast) [Musa acuminata] Length = 1359 Score = 460 bits (1183), Expect = e-149 Identities = 239/270 (88%), Positives = 245/270 (90%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIPKQGILRR ILAYFDDP YRRSNSGITKYGTVEVNSIIKKEDL EYRG Sbjct: 588 IPCFGISIEIPKQGILRRNSILAYFDDPRYRRSNSGITKYGTVEVNSIIKKEDLIEYRGP 647 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEFSPKYQ KVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER Sbjct: 648 KEFSPKYQTKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 707 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKKN+ELKIFSGDIYFPGEADKISRHSGILIPPET WI+VQRIT T Sbjct: 708 KKKNIELKIFSGDIYFPGEADKISRHSGILIPPET--EKKISKESKKWKNWIYVQRITPT 765 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFV VRPVVTYEIADGINLATLFPQDLLREK+NVQLRVVNYIL+GNGKSIRGISHT+ Sbjct: 766 KKKYFVLVRPVVTYEIADGINLATLFPQDLLREKDNVQLRVVNYILHGNGKSIRGISHTS 825 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCLVLNWDQEQ GS EEVHASF+EV Sbjct: 826 IQLVRTCLVLNWDQEQKGSPEEVHASFVEV 855 >emb|CCW72365.1| rpoC2 (chloroplast) [Musa acuminata subsp. malaccensis] Length = 1364 Score = 460 bits (1183), Expect = e-149 Identities = 239/270 (88%), Positives = 245/270 (90%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIPKQGILRR ILAYFDDP YRRSNSGITKYGTVEVNSIIKKEDL EYRG Sbjct: 588 IPCFGISIEIPKQGILRRNSILAYFDDPRYRRSNSGITKYGTVEVNSIIKKEDLIEYRGP 647 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEFSPKYQ KVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER Sbjct: 648 KEFSPKYQTKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 707 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKKN+ELKIFSGDIYFPGEADKISRHSGILIPPET WI+VQRIT T Sbjct: 708 KKKNIELKIFSGDIYFPGEADKISRHSGILIPPET--EKKISKESKKWKNWIYVQRITPT 765 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFV VRPVVTYEIADGINLATLFPQDLLREK+NVQLRVVNYIL+GNGKSIRGISHT+ Sbjct: 766 KKKYFVLVRPVVTYEIADGINLATLFPQDLLREKDNVQLRVVNYILHGNGKSIRGISHTS 825 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCLVLNWDQEQ GS EEVHASF+EV Sbjct: 826 IQLVRTCLVLNWDQEQKGSPEEVHASFVEV 855 >ref|YP_009420563.1| RNA polymerase beta subunit (chloroplast) [Musa itinerans] gb|ASO76251.1| RNA polymerase beta subunit (chloroplast) [Musa itinerans] Length = 1364 Score = 458 bits (1179), Expect = e-148 Identities = 238/270 (88%), Positives = 245/270 (90%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIPKQGILRR ILA+FDDP YRRSNSGITKYGTVEVNSIIKKEDL EYRG Sbjct: 588 IPCFGISIEIPKQGILRRNSILAFFDDPRYRRSNSGITKYGTVEVNSIIKKEDLIEYRGP 647 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEFSPKYQ KVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER Sbjct: 648 KEFSPKYQTKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 707 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKKN+ELKIFSGDIYFPGEADKISRHSGILIPPET WI+VQRIT T Sbjct: 708 KKKNIELKIFSGDIYFPGEADKISRHSGILIPPET--EKKISKESKKWKNWIYVQRITPT 765 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFV VRPVVTYEIADGINLATLFPQDLLREK+NVQLRVVNYIL+GNGKSIRGISHT+ Sbjct: 766 KKKYFVLVRPVVTYEIADGINLATLFPQDLLREKDNVQLRVVNYILHGNGKSIRGISHTS 825 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCLVLNWDQEQ GS EEVHASF+EV Sbjct: 826 IQLVRTCLVLNWDQEQKGSPEEVHASFVEV 855 >ref|YP_009415208.1| RNA polymerase beta' subunit (chloroplast) [Musella lasiocarpa] gb|ASL69854.1| RNA polymerase beta' subunit (chloroplast) [Musella lasiocarpa] Length = 1364 Score = 458 bits (1179), Expect = e-148 Identities = 238/270 (88%), Positives = 245/270 (90%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIPKQGILRR ILAYFDDP YRRSNSGITKYGTVEVNSIIKKEDL EYRGS Sbjct: 588 IPCFGISIEIPKQGILRRNSILAYFDDPRYRRSNSGITKYGTVEVNSIIKKEDLIEYRGS 647 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEFSPKYQ KVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER Sbjct: 648 KEFSPKYQTKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 707 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKKN+E+KIFSGDIYFP EADKISRHSGILIPPET WI+VQRIT T Sbjct: 708 KKKNIEIKIFSGDIYFPEEADKISRHSGILIPPET--EKKNSKESKKLKNWIYVQRITPT 765 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFV VRPVV+YEIADGINLATLFPQDLLREK+NVQLRVVNYILYGNGKSIRGISHT+ Sbjct: 766 KKKYFVLVRPVVSYEIADGINLATLFPQDLLREKDNVQLRVVNYILYGNGKSIRGISHTS 825 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCLVLNWDQEQ GS EEVHASF+EV Sbjct: 826 IQLVRTCLVLNWDQEQKGSPEEVHASFVEV 855 >ref|YP_008854415.1| RNA polymerase beta' subunit [Musa textilis] ref|YP_009180361.1| RNA polymerase beta' subunit (chloroplast) [Musa balbisiana] gb|AHA12504.1| RNA polymerase beta' subunit (plastid) [Musa textilis] gb|ALL97113.1| RNA polymerase beta' subunit (chloroplast) [Musa balbisiana] Length = 1364 Score = 457 bits (1177), Expect = e-148 Identities = 238/270 (88%), Positives = 244/270 (90%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIPKQGILRR ILAYFDDP YRRSNSGITKYGTVEVNSIIKKEDL EYRG Sbjct: 588 IPCFGISIEIPKQGILRRNSILAYFDDPRYRRSNSGITKYGTVEVNSIIKKEDLIEYRGP 647 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEFSPKYQ KVDRFFFILEEVHILPGSS IMVRNNSIIGVDTQLALNTRSRVGGLVRVER Sbjct: 648 KEFSPKYQTKVDRFFFILEEVHILPGSSSIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 707 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKKN+ELKIFSGDIYFPGEADKISRHSGILIPPET WI+VQRIT T Sbjct: 708 KKKNIELKIFSGDIYFPGEADKISRHSGILIPPET--EKKISKESKKWKNWIYVQRITPT 765 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFV VRPVVTYEIADGINLATLFPQDLLREK+NVQLRVVNYIL+GNGKSIRGISHT+ Sbjct: 766 KKKYFVLVRPVVTYEIADGINLATLFPQDLLREKDNVQLRVVNYILHGNGKSIRGISHTS 825 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCLVLNWDQEQ GS EEVHASF+EV Sbjct: 826 IQLVRTCLVLNWDQEQKGSPEEVHASFVEV 855 >gb|ABD93783.1| RNA polymerase beta chain, partial (chloroplast) [Maranta leuconeura] Length = 849 Score = 443 bits (1140), Expect = e-147 Identities = 234/273 (85%), Positives = 242/273 (88%), Gaps = 3/273 (1%) Frame = -1 Query: 828 IPCFGISIEIPKQGILR---RKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEY 658 IPCFGISIEIPKQGILR + ILAYFDDP YRRSNSGITKYGTVEVNSIIKKEDL EY Sbjct: 128 IPCFGISIEIPKQGILRILRKNSILAYFDDPRYRRSNSGITKYGTVEVNSIIKKEDLIEY 187 Query: 657 RGSKEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVR 478 RGSKEFSPKYQMKVD FFFILEEVHILPGSSLIMVRNNSII VDTQLALNTRSRVGGLVR Sbjct: 188 RGSKEFSPKYQMKVDPFFFILEEVHILPGSSLIMVRNNSIIEVDTQLALNTRSRVGGLVR 247 Query: 477 VERKKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRI 298 VERKKK +ELKIFSGDIYFPGEA KISRHSGILIPPET WI+VQRI Sbjct: 248 VERKKKYIELKIFSGDIYFPGEAGKISRHSGILIPPET--EKKKFKESKKSKNWIYVQRI 305 Query: 297 TLTKKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGIS 118 TKKKYFV VRPVVTYEIADGINLATLFPQDL+REK+NVQLRVVNYILYGNGKSIRGIS Sbjct: 306 IPTKKKYFVLVRPVVTYEIADGINLATLFPQDLVREKDNVQLRVVNYILYGNGKSIRGIS 365 Query: 117 HTNIQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 HT+IQLVRTCLVLNWDQEQ GS EEVHASF+E+ Sbjct: 366 HTSIQLVRTCLVLNWDQEQKGSPEEVHASFVEL 398 >gb|AHA13172.1| RNA polymerase beta' subunit (plastid) [Thaumatococcus daniellii] Length = 1386 Score = 451 bits (1160), Expect = e-145 Identities = 237/273 (86%), Positives = 243/273 (89%), Gaps = 3/273 (1%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRR---KGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEY 658 IPCFGISIEIPKQGILRR ILAYFDDP YRRSNSGITKYGTVEVNSIIKKEDL EY Sbjct: 589 IPCFGISIEIPKQGILRRIRRNSILAYFDDPQYRRSNSGITKYGTVEVNSIIKKEDLIEY 648 Query: 657 RGSKEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVR 478 R SKEFSPKYQMKVDRFFFILEEVHIL GSSLIMVRNNSIIGVDTQLALNTRSRVGGLVR Sbjct: 649 RRSKEFSPKYQMKVDRFFFILEEVHILSGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVR 708 Query: 477 VERKKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRI 298 VERKKK +ELKIFSGDIYFPGEADKISRH+GILIPPET I+VQRI Sbjct: 709 VERKKKYIELKIFSGDIYFPGEADKISRHNGILIPPET--EKKNSKESKKSKNGIYVQRI 766 Query: 297 TLTKKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGIS 118 T TKKKYFV VRPVVTYEI DGINLATLFPQDLLREK+NVQLRVVNYILYGNGKSIRGIS Sbjct: 767 TPTKKKYFVLVRPVVTYEIVDGINLATLFPQDLLREKDNVQLRVVNYILYGNGKSIRGIS 826 Query: 117 HTNIQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 HT+IQLVRTCLVLNWDQEQNGS EEVHASF+EV Sbjct: 827 HTSIQLVRTCLVLNWDQEQNGSPEEVHASFVEV 859 >gb|ABD93785.1| RNA polymerase beta chain, partial (chloroplast) [Lutheria splendens] Length = 849 Score = 436 bits (1122), Expect = e-144 Identities = 225/270 (83%), Positives = 240/270 (88%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIP GILR ILAYFDDP YRRS+SGITKYGT+EV+SIIKKEDL EYRG+ Sbjct: 133 IPCFGISIEIPINGILRGNSILAYFDDPRYRRSSSGITKYGTIEVDSIIKKEDLFEYRGA 192 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDT+LALNTRSRVGGLVRVER Sbjct: 193 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTRLALNTRSRVGGLVRVER 252 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKK +ELKIFSGDI+FPGE DKISRHSGI IPPET WI+VQRIT T Sbjct: 253 KKKYIELKIFSGDIHFPGETDKISRHSGIFIPPET--EKKNYKESKKWKNWIYVQRITPT 310 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFV VRPVVTYEI+DGINLATLFP+D+L+EK+NVQ RVVNYILYGNGKSIRGI HT+ Sbjct: 311 KKKYFVLVRPVVTYEISDGINLATLFPRDILQEKDNVQFRVVNYILYGNGKSIRGIYHTS 370 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCLVLNWDQEQNGS EEVHASF+EV Sbjct: 371 IQLVRTCLVLNWDQEQNGSIEEVHASFVEV 400 >ref|YP_009462801.1| RNA polymerase beta'' subunit (chloroplast) [Amomum compactum] gb|AUW34989.1| RNA polymerase beta'' subunit (chloroplast) [Amomum compactum] Length = 1378 Score = 449 bits (1154), Expect = e-144 Identities = 231/270 (85%), Positives = 243/270 (90%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIPKQGILRR ILA+FDDP YRR+NSGITKYGTVEVNSIIKKEDL EYRGS Sbjct: 588 IPCFGISIEIPKQGILRRNSILAFFDDPRYRRNNSGITKYGTVEVNSIIKKEDLIEYRGS 647 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEF PKYQMKVDRFFFILEEVHILPGSSLIMV+NNSIIGVDTQLALNTRSRVGGLVR+ER Sbjct: 648 KEFIPKYQMKVDRFFFILEEVHILPGSSLIMVQNNSIIGVDTQLALNTRSRVGGLVRLER 707 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKKN+ELKIFSGDIYFPGEADKISRHSGI IPP+T WI+VQRIT T Sbjct: 708 KKKNIELKIFSGDIYFPGEADKISRHSGIFIPPKT--EKKNSKESKKLKNWIYVQRITPT 765 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFVSVRPVVTYEI DGINLATLFPQDLLREK+NVQLRVVNYILYGNGKSIRGI HT+ Sbjct: 766 KKKYFVSVRPVVTYEITDGINLATLFPQDLLREKDNVQLRVVNYILYGNGKSIRGIFHTS 825 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCL+LNWD EQNGS +E+ ASFIEV Sbjct: 826 IQLVRTCLILNWDPEQNGSPKEIRASFIEV 855 >ref|YP_009459042.1| RNA polymerase beta'' subunit (chloroplast) [Amomum krervanh] gb|AUS83957.1| RNA polymerase beta'' subunit (chloroplast) [Amomum krervanh] Length = 1378 Score = 449 bits (1154), Expect = e-144 Identities = 231/270 (85%), Positives = 243/270 (90%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIPKQGILRR ILA+FDDP YRR+NSGITKYGTVEVNSIIKKEDL EYRGS Sbjct: 588 IPCFGISIEIPKQGILRRNSILAFFDDPRYRRNNSGITKYGTVEVNSIIKKEDLIEYRGS 647 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEF PKYQMKVDRFFFILEEVHILPGSSLIMV+NNSIIGVDTQLALNTRSRVGGLVR+ER Sbjct: 648 KEFIPKYQMKVDRFFFILEEVHILPGSSLIMVQNNSIIGVDTQLALNTRSRVGGLVRLER 707 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKKN+ELKIFSGDIYFPGEADKISRHSGI IPP+T WI+VQRIT T Sbjct: 708 KKKNIELKIFSGDIYFPGEADKISRHSGIFIPPKT--EKKNSKESKKLKNWIYVQRITPT 765 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFVSVRPVVTYEI DGINLATLFPQDLLREK+NVQLRVVNYILYGNGKSIRGI HT+ Sbjct: 766 KKKYFVSVRPVVTYEITDGINLATLFPQDLLREKDNVQLRVVNYILYGNGKSIRGIFHTS 825 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCL+LNWD EQNGS +E+ ASFIEV Sbjct: 826 IQLVRTCLILNWDPEQNGSPKEIRASFIEV 855 >gb|ABD93784.1| RNA polymerase beta chain, partial (chloroplast) [Sparganium americanum] Length = 834 Score = 434 bits (1117), Expect = e-144 Identities = 223/270 (82%), Positives = 241/270 (89%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIP GILRRK ILAYFDDP YRR++SGITK+GT+EV+SIIKKEDL EYRG+ Sbjct: 118 IPCFGISIEIPINGILRRKSILAYFDDPRYRRNSSGITKHGTIEVDSIIKKEDLIEYRGA 177 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEFSPKYQMKVD+FFFILEEVHILPGSS IMVRNNSIIGVDT+L +NTRSRVGGLVRVER Sbjct: 178 KEFSPKYQMKVDQFFFILEEVHILPGSSFIMVRNNSIIGVDTRLTINTRSRVGGLVRVER 237 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKK +ELKIFSGDI+FPGE DKISRHSGILIPPET WI+VQRIT T Sbjct: 238 KKKYIELKIFSGDIHFPGETDKISRHSGILIPPET--EKQNSTESKKLKNWIYVQRITPT 295 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFVSVRPVVTYEIADG+NLATLFPQDLL+EK+NVQLRVVNYILYGNGKSIRGI HT+ Sbjct: 296 KKKYFVSVRPVVTYEIADGLNLATLFPQDLLQEKDNVQLRVVNYILYGNGKSIRGIYHTS 355 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCLVLNWD EQNGS EEVHAS ++V Sbjct: 356 IQLVRTCLVLNWDYEQNGSREEVHASCVQV 385 >ref|YP_009192952.1| RNA polymerase beta' subunit (chloroplast) [Curcuma flaviflora] gb|ALP83536.1| RNA polymerase beta' subunit (chloroplast) [Curcuma flaviflora] Length = 1378 Score = 446 bits (1148), Expect = e-143 Identities = 230/270 (85%), Positives = 242/270 (89%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIPKQGILRR ILA+FDDP YRR+NSGITKYGTVEVNSIIKKEDL EYRGS Sbjct: 588 IPCFGISIEIPKQGILRRNSILAFFDDPQYRRNNSGITKYGTVEVNSIIKKEDLIEYRGS 647 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEF PKYQMKVDRFFFILEEVHILPGSSLIMV+NNSIIGVDTQLALNTRSRVGGLVR+ER Sbjct: 648 KEFIPKYQMKVDRFFFILEEVHILPGSSLIMVQNNSIIGVDTQLALNTRSRVGGLVRLER 707 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKKN+ELKIFSGDIYFPGEADKISRHSGI IPP+ WI+VQRIT T Sbjct: 708 KKKNIELKIFSGDIYFPGEADKISRHSGIFIPPK--KKKKNSKESKKWKNWIYVQRITPT 765 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFVSVRPVVTYEI DGINLATLFPQDLLREK+NVQLRVVNYILYGNGKSIRGI HT+ Sbjct: 766 KKKYFVSVRPVVTYEITDGINLATLFPQDLLREKDNVQLRVVNYILYGNGKSIRGIFHTS 825 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCL+LNWD EQNGS +E+ ASFIEV Sbjct: 826 IQLVRTCLILNWDPEQNGSPKEIRASFIEV 855 >gb|ABD93781.1| RNA polymerase beta chain, partial (chloroplast) [Chamaedorea tenella] Length = 847 Score = 433 bits (1113), Expect = e-143 Identities = 224/270 (82%), Positives = 241/270 (89%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 +PCFGISIEIP GILRR ILAYFDDP YRR++SGITKYGT+EV+SIIKKEDL EYRG+ Sbjct: 133 MPCFGISIEIPINGILRRNSILAYFDDPRYRRNSSGITKYGTIEVDSIIKKEDLIEYRGA 192 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEFSPKYQ KVDRFFFILEEVHILPGSS IMV+NNSIIGVDTQLALNTRSRVGGLVRVER Sbjct: 193 KEFSPKYQ-KVDRFFFILEEVHILPGSSFIMVQNNSIIGVDTQLALNTRSRVGGLVRVER 251 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKK++ELKIFSGDI+FPGE DKISRHSGILIPPET I+VQRIT T Sbjct: 252 KKKSIELKIFSGDIHFPGETDKISRHSGILIPPETEKKNSKKSKKFKNW--IYVQRITPT 309 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFVSVR VVTYEIADGINLATLFP+DLL+EK+NVQLRVVNYILYGNGKSIRGI HT+ Sbjct: 310 KKKYFVSVRSVVTYEIADGINLATLFPRDLLQEKDNVQLRVVNYILYGNGKSIRGIYHTS 369 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCLVLNWDQE+NGS EEVHASF+EV Sbjct: 370 IQLVRTCLVLNWDQEKNGSIEEVHASFVEV 399 >gb|AGE93360.1| RNA polymerase beta' subunit (plastid) [Alpinia zerumbet] Length = 1375 Score = 446 bits (1146), Expect = e-143 Identities = 230/270 (85%), Positives = 242/270 (89%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIPKQGILRR ILA+FDDP YRR+NSGITKYGTVEVNSIIKKEDL EYRGS Sbjct: 590 IPCFGISIEIPKQGILRRNSILAFFDDPRYRRNNSGITKYGTVEVNSIIKKEDLIEYRGS 649 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEF PKYQMKVDRFFFILEEVHILPGSSLIMV+NNSIIGVDTQLALNTRSRVGGLVR+ER Sbjct: 650 KEFIPKYQMKVDRFFFILEEVHILPGSSLIMVQNNSIIGVDTQLALNTRSRVGGLVRLER 709 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKK +ELKIFSGDIYFPGEADKISRHSGI IPP+T WI+VQRIT T Sbjct: 710 KKKYIELKIFSGDIYFPGEADKISRHSGIFIPPKT--EKKNDKESKKWKNWIYVQRITPT 767 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFVSVRPVVTYEI DGINLATLFPQDLLREK+NVQLRVVNYILYGNGKSIRGI HT+ Sbjct: 768 KKKYFVSVRPVVTYEITDGINLATLFPQDLLREKDNVQLRVVNYILYGNGKSIRGIFHTS 827 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCL+LNWD EQNGS +E+ ASFIEV Sbjct: 828 IQLVRTCLILNWDPEQNGSPKEIRASFIEV 857 >ref|YP_009428967.1| RNA polymerase beta'' subunit (chloroplast) [Alpinia oxyphylla] gb|ASW20428.1| RNA polymerase beta'' subunit (chloroplast) [Alpinia oxyphylla] Length = 1382 Score = 446 bits (1146), Expect = e-143 Identities = 230/270 (85%), Positives = 242/270 (89%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIPKQGILRR ILA+FDDP YRR+NSGITKYGTVEVNSIIKKEDL EYRGS Sbjct: 592 IPCFGISIEIPKQGILRRNSILAFFDDPRYRRNNSGITKYGTVEVNSIIKKEDLIEYRGS 651 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEF PKYQMKVDRFFFILEEVHILPGSSLIMV+NNSIIGVDTQLALNTRSRVGGLVR+ER Sbjct: 652 KEFIPKYQMKVDRFFFILEEVHILPGSSLIMVQNNSIIGVDTQLALNTRSRVGGLVRLER 711 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKK +ELKIFSGDIYFPGEADKISRHSGI IPP+T WI+VQRIT T Sbjct: 712 KKKYIELKIFSGDIYFPGEADKISRHSGIFIPPKT--EKKNDKESKKWKNWIYVQRITPT 769 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFVSVRPVVTYEI DGINLATLFPQDLLREK+NVQLRVVNYILYGNGKSIRGI HT+ Sbjct: 770 KKKYFVSVRPVVTYEITDGINLATLFPQDLLREKDNVQLRVVNYILYGNGKSIRGIFHTS 829 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCL+LNWD EQNGS +E+ ASFIEV Sbjct: 830 IQLVRTCLILNWDPEQNGSPKEIRASFIEV 859 >gb|ABD93788.1| RNA polymerase beta chain, partial (chloroplast) [Blandfordia grandiflora] Length = 856 Score = 432 bits (1112), Expect = e-143 Identities = 223/270 (82%), Positives = 242/270 (89%) Frame = -1 Query: 828 IPCFGISIEIPKQGILRRKGILAYFDDP*YRRSNSGITKYGTVEVNSIIKKEDLAEYRGS 649 IPCFGISIEIP GILRR ILAYFDDP YRRS+SGITKYGTVEV+SI+KKEDL EYRG+ Sbjct: 138 IPCFGISIEIPINGILRRNSILAYFDDPRYRRSSSGITKYGTVEVDSIVKKEDLIEYRGA 197 Query: 648 KEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRVER 469 KEFSPKYQMKVDRFFFI EEVHILPGSS IMV+NNSIIG++T+LALNT+SRVGGLVRVER Sbjct: 198 KEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVQNNSIIGINTRLALNTKSRVGGLVRVER 257 Query: 468 KKKNMELKIFSGDIYFPGEADKISRHSGILIPPETXXXXXXXXXXXXXXXWIHVQRITLT 289 KKK++ELKIFSGDI+FPGE DKISR SGIL+PP T WI+VQRIT T Sbjct: 258 KKKSIELKIFSGDIHFPGETDKISRPSGILMPPGT--EKKNSKESKKWKNWIYVQRITPT 315 Query: 288 KKKYFVSVRPVVTYEIADGINLATLFPQDLLREKNNVQLRVVNYILYGNGKSIRGISHTN 109 KKKYFVSVRPVVTYEIADGINLATLFPQDLL+EK+NVQLRVVNYILYGNGKSIRGISHT+ Sbjct: 316 KKKYFVSVRPVVTYEIADGINLATLFPQDLLQEKDNVQLRVVNYILYGNGKSIRGISHTS 375 Query: 108 IQLVRTCLVLNWDQEQNGSTEEVHASFIEV 19 IQLVRTCLVLNWDQE+NGS EEVHASF+EV Sbjct: 376 IQLVRTCLVLNWDQEKNGSIEEVHASFVEV 405