BLASTX nr result
ID: Cheilocostus21_contig00000878
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00000878
(1097 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009381394.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 220 1e-61
ref|XP_009381386.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 219 3e-61
ref|XP_010932029.2| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 216 4e-60
ref|XP_008798630.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 214 3e-59
ref|XP_009383719.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 212 1e-58
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 212 2e-58
ref|XP_008777792.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 209 2e-57
ref|XP_010245402.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 204 7e-56
gb|OVA13485.1| Helicase [Macleaya cordata] 204 1e-55
ref|XP_020672191.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 204 2e-55
ref|XP_022864605.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 203 2e-55
ref|XP_020099828.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 203 2e-55
gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides] 197 3e-55
ref|XP_020583408.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 203 3e-55
ref|XP_011087584.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 202 6e-55
gb|OAY71442.1| DEAD-box ATP-dependent RNA helicase 3, chloroplas... 199 7e-54
ref|XP_020099827.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 199 7e-54
ref|XP_020099826.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 199 7e-54
ref|XP_006382233.1| hypothetical protein POPTR_0005s00200g [Popu... 197 5e-53
ref|XP_011039069.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 196 8e-53
>ref|XP_009381394.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 754
Score = 220 bits (561), Expect = 1e-61
Identities = 119/197 (60%), Positives = 132/197 (67%)
Frame = +1
Query: 1 GYSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 180
GYSRG+FSARSVTGFLSDV AADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP
Sbjct: 571 GYSRGFFSARSVTGFLSDVVPAAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 630
Query: 181 GNTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
GN++SKITKLP LQDDGP TDNYGRFSN E
Sbjct: 631 GNSISKITKLPTLQDDGPSTDNYGRFSNRE------------RGYRGGSSRDRNQRGFRS 678
Query: 361 XXXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGA 540
+ RGGRV + +N LIGGRRSSR+S S+GNR+R+FGG
Sbjct: 679 WGARDSNSDDGFRRGGRVSRTDNSWSRSPRGSEDDWLIGGRRSSRSS-SYGNRDRSFGGT 737
Query: 541 CFNCGRAGHRASDCPSK 591
CFNCGR+GHRAS+CP+K
Sbjct: 738 CFNCGRSGHRASECPNK 754
>ref|XP_009381386.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 769
Score = 219 bits (558), Expect = 3e-61
Identities = 119/200 (59%), Positives = 132/200 (66%), Gaps = 3/200 (1%)
Frame = +1
Query: 1 GYSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 180
GYSRG+FSARSVTGFLSDV AADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP
Sbjct: 571 GYSRGFFSARSVTGFLSDVVPAAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 630
Query: 181 GNTLSKITKLPNLQDDGPPTDNYGRFSNWE---XXXXXXXXXXXXXXXXXXXXXXXXXXX 351
GN++SKITKLP LQDDGP TDNYGRFSN E
Sbjct: 631 GNSISKITKLPTLQDDGPSTDNYGRFSNRERGYRGGSSRDRNQRGFRSWGARDSNSDDGF 690
Query: 352 XXXXXXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAF 531
+ RGGRV + +N LIGGRRSSR+S S+GNR+R+F
Sbjct: 691 RRGGRVSRTDSDDGFRRGGRVSRTDNSWSRSPRGSEDDWLIGGRRSSRSS-SYGNRDRSF 749
Query: 532 GGACFNCGRAGHRASDCPSK 591
GG CFNCGR+GHRAS+CP+K
Sbjct: 750 GGTCFNCGRSGHRASECPNK 769
>ref|XP_010932029.2| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
3, chloroplastic [Elaeis guineensis]
Length = 762
Score = 216 bits (550), Expect = 4e-60
Identities = 115/196 (58%), Positives = 129/196 (65%)
Frame = +1
Query: 1 GYSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 180
GYSRG+FS RSVTGFLSDVY AADEVGKIYLIADER+QGAVFDLPE+IAKELLNKQLPP
Sbjct: 580 GYSRGFFSPRSVTGFLSDVYPAAADEVGKIYLIADERVQGAVFDLPEEIAKELLNKQLPP 639
Query: 181 GNTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
GNT+SKI KLP LQDDGPPTDNYGRFSN +
Sbjct: 640 GNTISKIMKLPALQDDGPPTDNYGRFSNRD-------------RGSRGGSRERGHRSSRN 686
Query: 361 XXXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGA 540
+ RGGR ++ +N LIGGRRS R+S SFG+R+R FGGA
Sbjct: 687 WGSRDYDSDDGFRRGGRSYRTDNSWSRSSRGSNDDWLIGGRRSGRSS-SFGSRDRGFGGA 745
Query: 541 CFNCGRAGHRASDCPS 588
CFNCGR GHRAS+CP+
Sbjct: 746 CFNCGRTGHRASECPN 761
>ref|XP_008798630.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Phoenix dactylifera]
Length = 762
Score = 214 bits (544), Expect = 3e-59
Identities = 112/196 (57%), Positives = 129/196 (65%)
Frame = +1
Query: 4 YSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPPG 183
Y+RG+FS RSVTGFLSDVY AADEVGKIYLIADER+QGAVFDLPE+IAKELL KQLPPG
Sbjct: 574 YTRGFFSPRSVTGFLSDVYPAAADEVGKIYLIADERVQGAVFDLPEEIAKELLKKQLPPG 633
Query: 184 NTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
NT+SKI KLP LQDDGPPTDNYGRFSNW+
Sbjct: 634 NTISKIMKLPALQDDGPPTDNYGRFSNWD------RGSRGSSRDRGRRGSRNGGGSSRNW 687
Query: 364 XXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGAC 543
+ RGGR ++ +N LI GRRS R+S SFG+R+R FGGAC
Sbjct: 688 GGRDNDSGDGFRRGGRSYRTDNSWSRSSRGSGDDWLISGRRSGRSS-SFGSRDRNFGGAC 746
Query: 544 FNCGRAGHRASDCPSK 591
+NCGR+GHRAS+CP+K
Sbjct: 747 YNCGRSGHRASECPTK 762
>ref|XP_009383719.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
[Musa acuminata subsp. malaccensis]
Length = 776
Score = 212 bits (540), Expect = 1e-58
Identities = 112/197 (56%), Positives = 131/197 (66%)
Frame = +1
Query: 1 GYSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 180
G+SRG+FSARSVTGFLSDV+ AADEVGKIY+IADER+QGAVFDLP+DIAKELLNKQLPP
Sbjct: 593 GHSRGFFSARSVTGFLSDVFPAAADEVGKIYMIADERVQGAVFDLPDDIAKELLNKQLPP 652
Query: 181 GNTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
GN++SKITKLP LQDDGPP DNYGRFSN +
Sbjct: 653 GNSISKITKLPTLQDDGPPVDNYGRFSNRD------------WGSRGGGSGERSQRVSRN 700
Query: 361 XXXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGA 540
+ RGG+V++ +N LIGGRRS +S S G+RER FGGA
Sbjct: 701 WGGRNSDSGDGFRRGGQVYRTDNSWSKSPRGSEDDWLIGGRRSHHSS-SQGSRERGFGGA 759
Query: 541 CFNCGRAGHRASDCPSK 591
CFNCGR+GHRAS+CP+K
Sbjct: 760 CFNCGRSGHRASECPNK 776
>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Vitis vinifera]
emb|CBI39694.3| unnamed protein product, partial [Vitis vinifera]
Length = 764
Score = 212 bits (539), Expect = 2e-58
Identities = 111/197 (56%), Positives = 129/197 (65%)
Frame = +1
Query: 1 GYSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 180
GYSRG+ SARSVTGFLSDVY AADE+GKIYL+ADER+QGAVFDLPE+IAKELLNKQ+PP
Sbjct: 573 GYSRGFLSARSVTGFLSDVYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPP 632
Query: 181 GNTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
GNT+SKITKLP LQDDGP D YGRFSN +
Sbjct: 633 GNTISKITKLPALQDDGPAGDYYGRFSNRDRSSRGGSRERRGSRISRGRGSSWGSDDDGG 692
Query: 361 XXXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGA 540
RGGR F++ N LIGGRRS+R+S SFG+RER+FGG+
Sbjct: 693 DDLNR--------RGGRSFRSNNNWSRNLRTSEDDWLIGGRRSNRSSSSFGSRERSFGGS 744
Query: 541 CFNCGRAGHRASDCPSK 591
CF CGR+GHRAS+CP+K
Sbjct: 745 CFTCGRSGHRASECPNK 761
>ref|XP_008777792.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
[Phoenix dactylifera]
Length = 759
Score = 209 bits (531), Expect = 2e-57
Identities = 113/196 (57%), Positives = 127/196 (64%)
Frame = +1
Query: 1 GYSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 180
GYSRG+FS RSVTGFLSDVY AADEVGKIYLIADER+QGAVFDLPE+IAKELLNKQLPP
Sbjct: 579 GYSRGFFSPRSVTGFLSDVYPAAADEVGKIYLIADERVQGAVFDLPEEIAKELLNKQLPP 638
Query: 181 GNTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
GNT+SKI KLP LQDDGP TDNYGRFSNW+
Sbjct: 639 GNTISKIMKLPALQDDGPSTDNYGRFSNWD-------------RGSRGGFRERGHRGSRN 685
Query: 361 XXXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGA 540
+ RGGR ++ +N +I GRRS +S SFG+RER FGGA
Sbjct: 686 WGGQGYVSDDGFRRGGRSYRTDN-RWSRTGGSDDDWVISGRRSGWSS-SFGSRERGFGGA 743
Query: 541 CFNCGRAGHRASDCPS 588
CFNCGR GHRAS+CP+
Sbjct: 744 CFNCGRTGHRASECPN 759
>ref|XP_010245402.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
isoform X1 [Nelumbo nucifera]
Length = 761
Score = 204 bits (520), Expect = 7e-56
Identities = 109/196 (55%), Positives = 127/196 (64%)
Frame = +1
Query: 4 YSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPPG 183
YSRGY SARSVTGFLSDV+ AADEVGKIYL+ADER+QGAVFDLPE+ A ELLNKQ PPG
Sbjct: 575 YSRGYLSARSVTGFLSDVFPAAADEVGKIYLVADERVQGAVFDLPEETASELLNKQTPPG 634
Query: 184 NTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
NT++KITKLP LQDDGPP DNYGRFSN E
Sbjct: 635 NTITKITKLPALQDDGPPGDNYGRFSNRE-----------RGSRGGSRERGGFRGSRGWG 683
Query: 364 XXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGAC 543
+ RGG +K +N LIG +RS+R+S SFG+R+R+FGGAC
Sbjct: 684 SGRDSDDEDGFRRGGWSYKTDNNRSRRSRSSGDDWLIGSKRSNRSS-SFGSRDRSFGGAC 742
Query: 544 FNCGRAGHRASDCPSK 591
FNCGR+GHRAS+CP+K
Sbjct: 743 FNCGRSGHRASECPNK 758
>gb|OVA13485.1| Helicase [Macleaya cordata]
Length = 809
Score = 204 bits (520), Expect = 1e-55
Identities = 112/196 (57%), Positives = 126/196 (64%)
Frame = +1
Query: 4 YSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPPG 183
YSRG+ SARSVTGFLSDV AADEVGKI+LIADER+QGAVFDLPE+IAKELL+KQ PPG
Sbjct: 623 YSRGFLSARSVTGFLSDVCPAAADEVGKIFLIADERVQGAVFDLPEEIAKELLSKQTPPG 682
Query: 184 NTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
NT+SKITKLP LQDDGP +DNYGRFSN E
Sbjct: 683 NTISKITKLPALQDDGPSSDNYGRFSNRE-----------RGSRGNSRERGGFRSSRGMG 731
Query: 364 XXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGAC 543
Y RGGR F+ +N LIGGRRS+R+S SF R+ FGGAC
Sbjct: 732 GGRASDDEDGYRRGGRSFRTDNNFSRNSRTSGDDWLIGGRRSNRSS-SFRGRDSGFGGAC 790
Query: 544 FNCGRAGHRASDCPSK 591
FNCGRAGH+ASDCP+K
Sbjct: 791 FNCGRAGHKASDCPNK 806
>ref|XP_020672191.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Dendrobium
catenatum]
ref|XP_020672192.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Dendrobium
catenatum]
gb|PKU77785.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Dendrobium
catenatum]
Length = 772
Score = 204 bits (518), Expect = 2e-55
Identities = 111/196 (56%), Positives = 124/196 (63%)
Frame = +1
Query: 1 GYSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 180
GYSRG+FSARSVTGFLSDVY AADEVGKI+L+ADE +Q AVFDLPE+IAKELLNKQLPP
Sbjct: 577 GYSRGFFSARSVTGFLSDVYPAAADEVGKIHLVADESVQAAVFDLPEEIAKELLNKQLPP 636
Query: 181 GNTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
GNTL KITKLP LQDDGPP+D YGRFSN E
Sbjct: 637 GNTLFKITKLPALQDDGPPSDYYGRFSNSE--RGSRSSFRDGFGSSRGGFKDRAYRGSRS 694
Query: 361 XXXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGA 540
+ RGGR +K N L GR+S+R PSFG+RER+FGGA
Sbjct: 695 LGGRDFDSDDEFRRGGRSYKTGNSWSKSSRGSDDGFLSSGRKSNR--PSFGSRERSFGGA 752
Query: 541 CFNCGRAGHRASDCPS 588
CF CGR GHRASDCP+
Sbjct: 753 CFKCGRTGHRASDCPN 768
>ref|XP_022864605.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Olea
europaea var. sylvestris]
Length = 760
Score = 203 bits (517), Expect = 2e-55
Identities = 111/197 (56%), Positives = 126/197 (63%)
Frame = +1
Query: 1 GYSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 180
GYSRGY SARSVTGFLSDVY AADEVGKI +IADE++QGAVFDLPE+IAKELLNK+LPP
Sbjct: 575 GYSRGYLSARSVTGFLSDVYSVAADEVGKIQIIADEKLQGAVFDLPEEIAKELLNKELPP 634
Query: 181 GNTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
GNT++KITKLP LQDDGPP+D YGRFSN +
Sbjct: 635 GNTITKITKLPALQDDGPPSDYYGRFSNTDRRSGRDSRDRRHTRSSRDWLDRDDGEDNLR 694
Query: 361 XXXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGA 540
RGGR ++E+ LIG RRS R SPSFG+ +R FGGA
Sbjct: 695 -------------RGGRGRRSESSWSRNSRSSGSEWLIGDRRSGR-SPSFGSNDRNFGGA 740
Query: 541 CFNCGRAGHRASDCPSK 591
CFNCGR GHRAS+CPSK
Sbjct: 741 CFNCGRTGHRASECPSK 757
>ref|XP_020099828.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X3
[Ananas comosus]
Length = 767
Score = 203 bits (517), Expect = 2e-55
Identities = 109/198 (55%), Positives = 126/198 (63%), Gaps = 1/198 (0%)
Frame = +1
Query: 1 GYSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 180
GYSRG+FSARSVTGFLSDVY AADEVGKIYL+ADE++QGAVFDLPE+IAKELLNKQ PP
Sbjct: 585 GYSRGFFSARSVTGFLSDVYSAAADEVGKIYLLADEQVQGAVFDLPEEIAKELLNKQFPP 644
Query: 181 GNTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
GNT+SK+TKLP LQDDGPPTDNYGRF N +
Sbjct: 645 GNTISKVTKLPPLQDDGPPTDNYGRFPNKD---------------RGSRDRGFSRSSRSR 689
Query: 361 XXXXXXXXXXXYPRGGRVFKNE-NXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGG 537
+ RGG+ F+ + N LI RRSSR+S R+R FGG
Sbjct: 690 GGGWHSDGDDAFRRGGQRFRTDNNWTKPSSRRSDDDWLISHRRSSRSSSFGSGRDRGFGG 749
Query: 538 ACFNCGRAGHRASDCPSK 591
ACFNCGR+GHRAS+CP+K
Sbjct: 750 ACFNCGRSGHRASECPNK 767
>gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 481
Score = 197 bits (502), Expect = 3e-55
Identities = 108/196 (55%), Positives = 125/196 (63%)
Frame = +1
Query: 4 YSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPPG 183
YSRG+ SARSVTGFLSDVY AADEVGKI++IADER+QGAVFDLPE+IAKELLNKQ+PPG
Sbjct: 297 YSRGFLSARSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPG 356
Query: 184 NTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
NT++KITKLP LQDDGPP D YGRFS+ +
Sbjct: 357 NTIAKITKLPALQDDGPPGDFYGRFSSRD----------RPARGGPRGQRGGFRSSRGRG 406
Query: 364 XXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGAC 543
Y RGGR NEN LIGGRRSSR +R+R+FGG+C
Sbjct: 407 SGRDSDDGGTYRRGGRSNSNENSWSQMSRSSGDDWLIGGRRSSRPP----SRDRSFGGSC 462
Query: 544 FNCGRAGHRASDCPSK 591
FNCGR+GHRAS+CP+K
Sbjct: 463 FNCGRSGHRASECPNK 478
>ref|XP_020583408.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Phalaenopsis
equestris]
Length = 772
Score = 203 bits (516), Expect = 3e-55
Identities = 111/196 (56%), Positives = 123/196 (62%)
Frame = +1
Query: 1 GYSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 180
GYSRG+FSARSVTGFLSDVY AADEVGKI+L+ADE IQGAVFDLPE+IAK+LLNKQLPP
Sbjct: 578 GYSRGFFSARSVTGFLSDVYPAAADEVGKIHLLADENIQGAVFDLPEEIAKDLLNKQLPP 637
Query: 181 GNTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
GNTL KITKLP LQDDGPP+D YG FSN E
Sbjct: 638 GNTLFKITKLPALQDDGPPSDFYGHFSNHERGSRSGFRDGFGSRGGFRDRTSRGSRSMGG 697
Query: 361 XXXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGA 540
RGGR ++ N L+ GR+SSR PSFGNRER+F GA
Sbjct: 698 RDYGSDDEVR---RGGRSYRTGNNWSKSSWGSDDDLLMSGRKSSR--PSFGNRERSFAGA 752
Query: 541 CFNCGRAGHRASDCPS 588
CF CGR GHRASDCP+
Sbjct: 753 CFKCGRTGHRASDCPN 768
>ref|XP_011087584.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Sesamum
indicum]
Length = 770
Score = 202 bits (514), Expect = 6e-55
Identities = 110/197 (55%), Positives = 125/197 (63%), Gaps = 1/197 (0%)
Frame = +1
Query: 4 YSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPPG 183
YSRGY SARSVTGFLSDVY AADE+GKI+LIAD+ +QGAVFDLPE+IAKELLNK+LPPG
Sbjct: 572 YSRGYLSARSVTGFLSDVYYAAADEIGKIHLIADQNVQGAVFDLPEEIAKELLNKELPPG 631
Query: 184 NTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
NT+SKITKLP LQDDGPP+D YGRFSN +
Sbjct: 632 NTISKITKLPPLQDDGPPSDFYGRFSNSDRRSPRGSRDQRGGSRDQRGGSRDRRSFRSSR 691
Query: 364 XXXXXXXXXXYP-RGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGA 540
RG R + EN LIG R+SSR SPSFG+R+R FGGA
Sbjct: 692 DWLDDIDDEDNSRRGSRSSRTENRWSRNSRSSGSDWLIGDRQSSR-SPSFGSRDRNFGGA 750
Query: 541 CFNCGRAGHRASDCPSK 591
CFNCGR GHRAS+CP+K
Sbjct: 751 CFNCGRTGHRASECPNK 767
>gb|OAY71442.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Ananas comosus]
Length = 799
Score = 199 bits (507), Expect = 7e-54
Identities = 111/200 (55%), Positives = 128/200 (64%), Gaps = 3/200 (1%)
Frame = +1
Query: 1 GYSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 180
GYSRG+FSARSVTGFLSDVY AADEVGKIYL+ADE++QGAVFDLPE+IAKELLNKQ PP
Sbjct: 588 GYSRGFFSARSVTGFLSDVYSAAADEVGKIYLLADEQVQGAVFDLPEEIAKELLNKQFPP 647
Query: 181 GNTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
GNT+SK+TKLP LQDDGPPTDNYGRF N +
Sbjct: 648 GNTISKVTKLPPLQDDGPPTDNYGRFPNKD---------------RGSRDRGFSRSSRSR 692
Query: 361 XXXXXXXXXXXYPRGGRVFKNE-NXXXXXXXXXXXXXLIGGRRSSRTSPSFGN--RERAF 531
+ RGG+ F+ + N LI RRSSR+S SFG+ R F
Sbjct: 693 GGGWHSDGDDAFRRGGQRFRTDNNWTKPSSRRSDDDWLIDNRRSSRSS-SFGSGRDSRGF 751
Query: 532 GGACFNCGRAGHRASDCPSK 591
GGACFNCGR+GHRAS+CP+K
Sbjct: 752 GGACFNCGRSGHRASECPNK 771
>ref|XP_020099827.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X2
[Ananas comosus]
Length = 767
Score = 199 bits (506), Expect = 7e-54
Identities = 111/200 (55%), Positives = 128/200 (64%), Gaps = 3/200 (1%)
Frame = +1
Query: 1 GYSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 180
GYSRG+FSARSVTGFLSDVY AADEVGKIYL+ADE++QGAVFDLPE+IAKELLNKQ PP
Sbjct: 584 GYSRGFFSARSVTGFLSDVYSAAADEVGKIYLLADEQVQGAVFDLPEEIAKELLNKQFPP 643
Query: 181 GNTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
GNT+SK+TKLP LQDDGPPTDNYGRF N +
Sbjct: 644 GNTISKVTKLPPLQDDGPPTDNYGRFPNKD---------------RGSRDRGFSRSSRSR 688
Query: 361 XXXXXXXXXXXYPRGGRVFKNE-NXXXXXXXXXXXXXLIGGRRSSRTSPSFGN--RERAF 531
+ RGG+ F+ + N LI RRSSR+S SFG+ R F
Sbjct: 689 GGGWHSDGDDAFRRGGQRFRTDNNWTKPSSRRSDDDWLISHRRSSRSS-SFGSGRDSRGF 747
Query: 532 GGACFNCGRAGHRASDCPSK 591
GGACFNCGR+GHRAS+CP+K
Sbjct: 748 GGACFNCGRSGHRASECPNK 767
>ref|XP_020099826.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X1
[Ananas comosus]
Length = 768
Score = 199 bits (506), Expect = 7e-54
Identities = 111/200 (55%), Positives = 128/200 (64%), Gaps = 3/200 (1%)
Frame = +1
Query: 1 GYSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 180
GYSRG+FSARSVTGFLSDVY AADEVGKIYL+ADE++QGAVFDLPE+IAKELLNKQ PP
Sbjct: 585 GYSRGFFSARSVTGFLSDVYSAAADEVGKIYLLADEQVQGAVFDLPEEIAKELLNKQFPP 644
Query: 181 GNTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
GNT+SK+TKLP LQDDGPPTDNYGRF N +
Sbjct: 645 GNTISKVTKLPPLQDDGPPTDNYGRFPNKD---------------RGSRDRGFSRSSRSR 689
Query: 361 XXXXXXXXXXXYPRGGRVFKNE-NXXXXXXXXXXXXXLIGGRRSSRTSPSFGN--RERAF 531
+ RGG+ F+ + N LI RRSSR+S SFG+ R F
Sbjct: 690 GGGWHSDGDDAFRRGGQRFRTDNNWTKPSSRRSDDDWLISHRRSSRSS-SFGSGRDSRGF 748
Query: 532 GGACFNCGRAGHRASDCPSK 591
GGACFNCGR+GHRAS+CP+K
Sbjct: 749 GGACFNCGRSGHRASECPNK 768
>ref|XP_006382233.1| hypothetical protein POPTR_0005s00200g [Populus trichocarpa]
gb|PNT34211.1| hypothetical protein POPTR_005G000100v3 [Populus trichocarpa]
gb|PNT34212.1| hypothetical protein POPTR_005G000100v3 [Populus trichocarpa]
Length = 773
Score = 197 bits (500), Expect = 5e-53
Identities = 107/195 (54%), Positives = 124/195 (63%)
Frame = +1
Query: 4 YSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPPG 183
YSRG+ SARSVTGFLSDVY AADE+GKI+LIADER+QGAVFDLPE+IAKELLNKQLPPG
Sbjct: 593 YSRGFLSARSVTGFLSDVYPAAADEIGKIHLIADERVQGAVFDLPEEIAKELLNKQLPPG 652
Query: 184 NTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
NT+ KITKLP LQDDGPP+D YGRFS+ +
Sbjct: 653 NTIEKITKLPALQDDGPPSDFYGRFSSRDRPARGGPRGQRGGFRSSRGQGSGRYSDDEGT 712
Query: 364 XXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGAC 543
RGGR NEN L+GGRRSSR S +R+R+FGG+C
Sbjct: 713 NR----------RGGRSNSNENTRSWMSRSSGDDWLVGGRRSSRPS----SRDRSFGGSC 758
Query: 544 FNCGRAGHRASDCPS 588
FNCGR+GHRAS+CP+
Sbjct: 759 FNCGRSGHRASECPN 773
>ref|XP_011039069.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
isoform X2 [Populus euphratica]
Length = 775
Score = 196 bits (499), Expect = 8e-53
Identities = 107/196 (54%), Positives = 125/196 (63%)
Frame = +1
Query: 4 YSRGYFSARSVTGFLSDVYLDAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPPG 183
YSRG+ SARSVTGFLSDVY AADEVGKI++IADER+QGAVFDLPE+IAKELLNKQ+PPG
Sbjct: 591 YSRGFLSARSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPG 650
Query: 184 NTLSKITKLPNLQDDGPPTDNYGRFSNWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
NT++KITKLP LQDDGPP D YGRFS+ +
Sbjct: 651 NTIAKITKLPALQDDGPPGDFYGRFSSRD----------RPARGGPRGQRGGFRSSRGRG 700
Query: 364 XXXXXXXXXXYPRGGRVFKNENXXXXXXXXXXXXXLIGGRRSSRTSPSFGNRERAFGGAC 543
Y RGGR NEN LIGGRRSSR +R+R+FGG+C
Sbjct: 701 SGRDSDDEGMYRRGGRSNSNENSWSRMSRSSGDDWLIGGRRSSRPP----SRDRSFGGSC 756
Query: 544 FNCGRAGHRASDCPSK 591
FNCGR+GHRAS+CP++
Sbjct: 757 FNCGRSGHRASECPNR 772