BLASTX nr result

ID: Cheilocostus21_contig00000712 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00000712
         (1440 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009402265.1| PREDICTED: fasciclin-like arabinogalactan pr...    69   1e-08
ref|XP_018682246.1| PREDICTED: fasciclin-like arabinogalactan pr...    69   1e-08
ref|XP_009384845.1| PREDICTED: fasciclin-like arabinogalactan pr...    61   3e-06

>ref|XP_009402265.1| PREDICTED: fasciclin-like arabinogalactan protein 4 isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 470

 Score = 68.6 bits (166), Expect = 1e-08
 Identities = 37/59 (62%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = +1

Query: 7   QVQAASPPLSEATGLAPQGAERVDAPPARLSSPPEVR-EVTSGAAGHGRFALSCIASIY 180
           Q  AA+PP  EA GL PQGAE  D PPARLSSPP +R E+TSGAA     A+SCIAS++
Sbjct: 370 QAAAAAPPPVEAAGLPPQGAEDWDTPPARLSSPPGLREELTSGAAVRDGVAVSCIASLF 428


>ref|XP_018682246.1| PREDICTED: fasciclin-like arabinogalactan protein 4 isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 497

 Score = 68.6 bits (166), Expect = 1e-08
 Identities = 37/59 (62%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = +1

Query: 7   QVQAASPPLSEATGLAPQGAERVDAPPARLSSPPEVR-EVTSGAAGHGRFALSCIASIY 180
           Q  AA+PP  EA GL PQGAE  D PPARLSSPP +R E+TSGAA     A+SCIAS++
Sbjct: 370 QAAAAAPPPVEAAGLPPQGAEDWDTPPARLSSPPGLREELTSGAAVRDGVAVSCIASLF 428


>ref|XP_009384845.1| PREDICTED: fasciclin-like arabinogalactan protein 4 [Musa acuminata
           subsp. malaccensis]
          Length = 430

 Score = 60.8 bits (146), Expect = 3e-06
 Identities = 36/59 (61%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +1

Query: 7   QVQAASPPLSEATGLAPQGAERVDAPPARLSSPPEVRE-VTSGAAGHGRFALSCIASIY 180
           Q  AA+P   E   LAPQGAE VD PPA +SSPP VRE VTSGA G    AL C AS+Y
Sbjct: 368 QAVAAAPQPPE---LAPQGAEEVDTPPASMSSPPGVREDVTSGADGREEVALFCTASLY 423


Top