BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00000632
         (1748 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]                     302   8e-86
gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus]          296   1e-83
gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus]          296   1e-83
gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus]          296   1e-83
gb|APB42235.1| ORF3 [Dioscorea bacilliform virus]                     280   5e-78
gb|ANV20896.1| ORF3 protein [Dioscorea bacilliform RT virus]          275   1e-76
gb|ASA40116.1| ORF3 [Dioscorea bacilliform RT virus 2]                273   7e-76
gb|ANV20902.1| ORF3 protein [Dioscorea bacilliform RT virus]          272   2e-75
gb|ANV20899.1| ORF3 protein [Dioscorea bacilliform RT virus]          270   1e-74
gb|ATW01249.1| ORF3 protein [Dioscorea bacilliform RT virus]          268   6e-74
gb|AHG32725.1| ORF3, partial [Dioscorea rotundata]                    264   7e-73
gb|ASA40120.1| ORF3 [Dioscorea bacilliform virus]                     259   4e-71
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]                   254   2e-69
ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus] >...   254   4e-69
gb|ANV20884.1| ORF3 protein [Dioscorea bacilliform AL virus]          251   2e-68
gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus]            247   5e-67
gb|ANV20881.1| ORF3 protein [Dioscorea bacilliform AL virus]          245   4e-66
gb|ANV20878.1| ORF3 protein [Dioscorea bacilliform AL virus]          244   5e-66
gb|ATZ69506.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]   236   4e-63
gb|AHG32726.1| ORF3, partial [Dioscorea rotundata]                    193   2e-50

>gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]
          Length = 1946

 Score =  302 bits (774), Expect = 8e-86
 Identities = 172/437 (39%), Positives = 243/437 (55%), Gaps = 18/437 (4%)
 Frame = -1

Query: 1550 VAMAHEQTNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDKCKCCGRVTMKKD 1371
            +    ++ N+Y IGK   WR  VRVTKE HDC+H WEM+  +     +C  C R T +  
Sbjct: 1034 ICYLRQEDNTYWIGKDDNWRAQVRVTKEVHDCNHTWEMHPEMIGQTPRCLTCKRETQQSW 1093

Query: 1370 RMHCSKCLITSCGMCSSNYFDITIPVEREQPIPYKPFALIREQQAYIAWSDNEMERLRQE 1191
            R HCSKC  TSCGMC  NYF+I IPV R +P+ Y P  L+ +QQ YI W+D E+ERL+ E
Sbjct: 1094 RAHCSKCQTTSCGMCGPNYFNIKIPVRRVEPVRYDPKPLLEQQQVYIKWADAEIERLKGE 1153

Query: 1190 IKTVKALAALXXXXXXXXXXXXXXXXXXXXSAE----RMALDTEIEELKFKADALELENH 1023
            +K V+  AAL                      E    ++ +DTE EEL+F+ D L+LE H
Sbjct: 1154 LKAVQEKAALEAQNMQENVQREIEAQSKIHMQEIEAIKLEVDTENEELRFENDRLKLEVH 1213

Query: 1022 DLRGQIS----KQPVPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKTNGLFNMT 855
            DL+  +     K+P+  +                             QP+R  N L+N+ 
Sbjct: 1214 DLKKLLDAIKGKEPLEDEDGEGTSAFLREEEHEKIFSAEAAV-----QPRRNGNKLYNLN 1268

Query: 854  VEIDLPGMAKFQVNAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKN 675
            VE ++P +  F+V AIL TGATTCC D+ +IP +A+EE+ + V F+G+NS + + KK+K 
Sbjct: 1269 VEFNIPNIPPFRVRAILDTGATTCCADEKAIPNDALEESPYRVRFTGVNSTSHSNKKMKA 1328

Query: 674  GSMRIGEHSFRIPYTYAFPLTLGGNITMILGCNFIR--SGGLRIEGDEVTFYKNVTTIKT 501
            G M+IGEH FRIP+TY FPL L  +I MI+GCNFIR  +GG+RIEG+EVTFYKNVTTIKT
Sbjct: 1329 GVMKIGEHFFRIPFTYIFPLKL-DDIQMIIGCNFIRAMAGGIRIEGNEVTFYKNVTTIKT 1387

Query: 500  HQLTATAPAXXXXXXXXXEYLHIQEQVNIVEAYQPGT--------HFKRLLTKLTEAGYE 345
                + A +           L  +E +++ +A +P            +  +  L E G+ 
Sbjct: 1388 LPYASAAASIEELD------LEEEEFISLTQAAEPTVTNNKEFCQRIEPTIKALKEQGF- 1440

Query: 344  ALGTESSQVQIRN*ESC 294
             +G E  +  ++N  +C
Sbjct: 1441 -IGEEPMKHWVKNKVTC 1456


>gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1919

 Score =  296 bits (758), Expect = 1e-83
 Identities = 177/432 (40%), Positives = 241/432 (55%), Gaps = 10/432 (2%)
 Frame = -1

Query: 1559 KSPVAMAHEQTNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDKCKCCGRVTM 1380
            K  +    ++ N+Y +G  GGWR  VRVT+++HDC H WE   P       C+ C R  M
Sbjct: 999  KETLYYLRQEDNAYFLGG-GGWRCAVRVTQQEHDCRHQWEYYSPTVA---NCRFCKREVM 1054

Query: 1379 KKDRMHCSKCLITSCGMCSSNYFDITIPVEREQPIP-YKPFALIREQQAYIAWSDNEMER 1203
            ++    CSKC I +CGMCS +Y  + IP +RE+    Y P  L+ EQQ+YI   + E++R
Sbjct: 1055 QRWNAKCSKCSILTCGMCSEHYLGLNIPCQREEIRQVYNPRQLMMEQQSYIQSCELEIQR 1114

Query: 1202 LRQEIKTVKALAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENH 1023
            L++EI+ VK +A                      +     +  +I+ELK + D L LENH
Sbjct: 1115 LKEEIQNVKKVAE-----------EQVVAAKINEAVAVKEMQEQIQELKLENDRLTLENH 1163

Query: 1022 DLRGQI-SKQPVPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKTNGLFNMTVEI 846
            DL+  + +K+P  ++                               K + NGL+N+ VEI
Sbjct: 1164 DLKELLKNKEPEQLEVLICEGKERQYIAAASL--------------KERRNGLYNLMVEI 1209

Query: 845  DLPGMAKFQVNAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKNGSM 666
            D+PG     VNAIL TGATTCCI++  +PKE +E+NT+ V F G NS+  ATKKLK G+M
Sbjct: 1210 DIPGSLPIMVNAILDTGATTCCINEKGLPKEILEDNTYEVKFVGANSEMTATKKLKAGNM 1269

Query: 665  RIGEHSFRIPYTYAFPLTLGGNITMILGCNFIR--SGGLRIEGDEVTFYKNVTTIKTHQL 492
            +IG+H+FRIPYT+AFPL LGG   +ILGCNFIR  SGG+RIEGD VTFYKNVTTIKT Q 
Sbjct: 1270 KIGDHTFRIPYTFAFPLELGGGEQLILGCNFIRSMSGGVRIEGDNVTFYKNVTTIKTQQE 1329

Query: 491  TATAPAXXXXXXXXXEYLHIQEQVNIVEAYQPGTH------FKRLLTKLTEAGYEALGTE 330
             +   +         EY+ IQ+ V+   A  PG H      F  L+ KL EAGY  +G E
Sbjct: 1330 VSKVLSLEELEMNEDEYISIQQSVS---AISPGIHSSFTTRFGDLIQKLKEAGY--VGEE 1384

Query: 329  SSQVQIRN*ESC 294
              +   +N  +C
Sbjct: 1385 PMKFWQQNKVTC 1396


>gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1921

 Score =  296 bits (758), Expect = 1e-83
 Identities = 177/432 (40%), Positives = 241/432 (55%), Gaps = 10/432 (2%)
 Frame = -1

Query: 1559 KSPVAMAHEQTNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDKCKCCGRVTM 1380
            K  +    ++ N+Y +G  GGWR  VRVT+++HDC H WE   P       C+ C R  M
Sbjct: 1001 KETLYYLRQEDNAYFLGG-GGWRCAVRVTQQEHDCRHQWEYYSPTVA---NCRFCKREVM 1056

Query: 1379 KKDRMHCSKCLITSCGMCSSNYFDITIPVEREQPIP-YKPFALIREQQAYIAWSDNEMER 1203
            ++    CSKC I +CGMCS +Y  + IP +RE+    Y P  L+ EQQ+YI   + E++R
Sbjct: 1057 QRWNAKCSKCSILTCGMCSEHYLGLNIPCQREEIRQVYNPRQLMMEQQSYIQSCELEIQR 1116

Query: 1202 LRQEIKTVKALAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENH 1023
            L++EI+ VK +A                      +     +  +I+ELK + D L LENH
Sbjct: 1117 LKEEIQNVKKVAE-----------EQVVAAKINEAVAVKEMQEQIQELKLENDRLTLENH 1165

Query: 1022 DLRGQI-SKQPVPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKTNGLFNMTVEI 846
            DL+  + +K+P  ++                               K + NGL+N+ VEI
Sbjct: 1166 DLKELLKNKEPEQLEVLICEGKERQYIAAASL--------------KERRNGLYNLMVEI 1211

Query: 845  DLPGMAKFQVNAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKNGSM 666
            D+PG     VNAIL TGATTCCI++  +PKE +E+NT+ V F G NS+  ATKKLK G+M
Sbjct: 1212 DIPGSLPIMVNAILDTGATTCCINEKGLPKEILEDNTYEVKFVGANSEMTATKKLKAGNM 1271

Query: 665  RIGEHSFRIPYTYAFPLTLGGNITMILGCNFIR--SGGLRIEGDEVTFYKNVTTIKTHQL 492
            +IG+H+FRIPYT+AFPL LGG   +ILGCNFIR  SGG+RIEGD VTFYKNVTTIKT Q 
Sbjct: 1272 KIGDHTFRIPYTFAFPLELGGGEQLILGCNFIRSMSGGVRIEGDNVTFYKNVTTIKTQQE 1331

Query: 491  TATAPAXXXXXXXXXEYLHIQEQVNIVEAYQPGTH------FKRLLTKLTEAGYEALGTE 330
             +   +         EY+ IQ+ V+   A  PG H      F  L+ KL EAGY  +G E
Sbjct: 1332 VSKVLSLEELEMNEDEYISIQQSVS---AISPGIHSSFTTRFGDLIQKLKEAGY--VGEE 1386

Query: 329  SSQVQIRN*ESC 294
              +   +N  +C
Sbjct: 1387 PMKFWQQNKVTC 1398


>gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1921

 Score =  296 bits (758), Expect = 1e-83
 Identities = 177/432 (40%), Positives = 241/432 (55%), Gaps = 10/432 (2%)
 Frame = -1

Query: 1559 KSPVAMAHEQTNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDKCKCCGRVTM 1380
            K  +    ++ N+Y +G  GGWR  VRVT+++HDC H WE   P       C+ C R  M
Sbjct: 1001 KETLYYLRQEDNAYFLGG-GGWRCAVRVTQQEHDCRHQWEYYSPTVA---NCRFCKREVM 1056

Query: 1379 KKDRMHCSKCLITSCGMCSSNYFDITIPVEREQPIP-YKPFALIREQQAYIAWSDNEMER 1203
            ++    CSKC I +CGMCS +Y  + IP +RE+    Y P  L+ EQQ+YI   + E++R
Sbjct: 1057 QRWNAKCSKCSILTCGMCSEHYLGLNIPCQREEIRQVYNPRQLMMEQQSYIQSCELEIQR 1116

Query: 1202 LRQEIKTVKALAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENH 1023
            L++EI+ VK +A                      +     +  +I+ELK + D L LENH
Sbjct: 1117 LKEEIQNVKKVAE-----------EQVVAAKINEAVAVKEMQEQIQELKLENDRLTLENH 1165

Query: 1022 DLRGQI-SKQPVPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKTNGLFNMTVEI 846
            DL+  + +K+P  ++                               K + NGL+N+ VEI
Sbjct: 1166 DLKELLKNKEPEQLEVLICEGKERQYIAAASL--------------KERRNGLYNLIVEI 1211

Query: 845  DLPGMAKFQVNAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKNGSM 666
            D+PG     VNAIL TGATTCCI++  +PKE +E+NT+ V F G NS+  ATKKLK G+M
Sbjct: 1212 DIPGSLPIMVNAILDTGATTCCINEKGLPKEILEDNTYEVKFVGANSEMTATKKLKAGNM 1271

Query: 665  RIGEHSFRIPYTYAFPLTLGGNITMILGCNFIR--SGGLRIEGDEVTFYKNVTTIKTHQL 492
            +IG+H+FRIPYT+AFPL LGG   +ILGCNFIR  SGG+RIEGD VTFYKNVTTIKT Q 
Sbjct: 1272 KIGDHTFRIPYTFAFPLELGGGEQLILGCNFIRSMSGGVRIEGDNVTFYKNVTTIKTQQE 1331

Query: 491  TATAPAXXXXXXXXXEYLHIQEQVNIVEAYQPGTH------FKRLLTKLTEAGYEALGTE 330
             +   +         EY+ IQ+ V+   A  PG H      F  L+ KL EAGY  +G E
Sbjct: 1332 VSKVLSLEELEMNEDEYISIQQSVS---AISPGIHSSFTTRFGDLIQKLKEAGY--VGEE 1386

Query: 329  SSQVQIRN*ESC 294
              +   +N  +C
Sbjct: 1387 PMKFWQQNKVTC 1398


>gb|APB42235.1| ORF3 [Dioscorea bacilliform virus]
          Length = 1897

 Score =  280 bits (715), Expect = 5e-78
 Identities = 166/420 (39%), Positives = 228/420 (54%), Gaps = 6/420 (1%)
 Frame = -1

Query: 1535 EQTNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDKCKCCGRVTMKKDRMHCS 1356
            E+ ++Y +G  GGWR  V+V++++HDC H W+     T   DKC+ C R  MK+    C 
Sbjct: 1002 EEDHTYFLGG-GGWRCSVKVSQQEHDCKHRWDY---YTNTADKCRFCKREVMKRWNARCQ 1057

Query: 1355 KCLITSCGMCSSNYFDITIPVEREQPIP-YKPFALIREQQAYIAWSDNEMERLRQEIKTV 1179
             C I +CGMCS +Y D+ +P ++E+    Y P  L+ EQQ YI   + E++RL+ E+   
Sbjct: 1058 HCNILTCGMCSKHYVDLELPCQQEEIRQVYNPQQLMMEQQNYIQSCEMEIQRLKDELARE 1117

Query: 1178 KALAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENHDLRGQISK 999
            K +A                      +  +     ++EE+K + D L LEN DL+ +I  
Sbjct: 1118 KKVAE-----------EMVVAARISEAVSQQESKKQLEEMKLENDRLTLENEDLKKEIRS 1166

Query: 998  QPVPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKTNGLFNMTVEIDLPGMAKFQ 819
              + I+                               K + NGL+N+ VE+D+PG    +
Sbjct: 1167 LKIQIEDMAVNVLICDGKDKHVAATLPL---------KERRNGLYNLIVELDIPGSTPLK 1217

Query: 818  VNAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKNGSMRIGEHSFRI 639
            VNAIL TGATTCCI++  +PKE +E+NTF V F+G NS   A KKLKNG+MRIG+H FRI
Sbjct: 1218 VNAILDTGATTCCINEEGLPKEILEDNTFEVKFTGANSVMTAIKKLKNGTMRIGDHQFRI 1277

Query: 638  PYTYAFPLTLGGNITMILGCNFIRS--GGLRIEGDEVTFYKNVTTIKTHQLTATAPAXXX 465
            PYTYAFPL LGG   +ILGCNFIRS  GG+RIEG+EVTFYKNVTTI+T Q      A   
Sbjct: 1278 PYTYAFPLKLGGGEQLILGCNFIRSMNGGVRIEGNEVTFYKNVTTIQTQQEVPKVLALEE 1337

Query: 464  XXXXXXEYLHIQEQVNI---VEAYQPGTHFKRLLTKLTEAGYEALGTESSQVQIRN*ESC 294
                  EY+ IQE  +    V        F+ L+ +L  AGY  +G E  +    N  +C
Sbjct: 1338 LEMGEEEYIAIQESCSTICPVVNINFAQRFEDLILELKSAGY--IGEEPMKFWSHNKVTC 1395


>gb|ANV20896.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1893

 Score =  275 bits (704), Expect = 1e-76
 Identities = 163/411 (39%), Positives = 227/411 (55%), Gaps = 16/411 (3%)
 Frame = -1

Query: 1532 QTNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDK----CKCCGRVTMKKDRM 1365
            + N+Y +G  GGWR  V+VT ++H+C+H W         Y++    C+ C R  MK+   
Sbjct: 963  EDNTYWLGG-GGWRFAVKVTPQEHNCAHSWSY-------YEEQSRTCRFCKREVMKRFNA 1014

Query: 1364 HCSKCLITSCGMCSSNYFDITIPVEREQPIP-YKPFALIREQQAYIAWSDNEMERLRQEI 1188
            HCSKC IT+CGMCS++Y    IP ++E+  P Y+P  L+ EQ  YI   + E+ RL+QE+
Sbjct: 1015 HCSKCSITTCGMCSNHYLGFQIPCQQEEVRPVYEPRQLMNEQMTYIKHCEEEIARLKQEV 1074

Query: 1187 KTVKALAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENHDLRGQ 1008
               K L+                      + E   L  E E L+ + + L+LE  DL   
Sbjct: 1075 AAAKILSE-----------NEIVSMKIREAVETDTLRKENETLRLENERLQLEVADLNKI 1123

Query: 1007 IS-KQPVPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKT--------NGLFNMT 855
            I  KQP+ I                              + K +         NGL+N+ 
Sbjct: 1124 IKGKQPI-IPEDEELEELKQQVQQLKKSLEEKRLGVIICEGKGEQVLATTSSRNGLYNLV 1182

Query: 854  VEIDLPGMAKFQVNAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKN 675
            VE+ +PG+  F VNAIL TGAT CCI++  +PK A+E+NTF V F+G NS  KA KKLK 
Sbjct: 1183 VELSIPGILPFSVNAILDTGATNCCINEEGLPKGALEDNTFEVTFTGANSVMKANKKLKG 1242

Query: 674  GSMRIGEHSFRIPYTYAFPLTLGGNITMILGCNFIRS--GGLRIEGDEVTFYKNVTTIKT 501
            G M+IG+H FRIPYT+AFPL LGG   +ILGCNFIR+  GGLRIEGDEVTFYKNVTTIKT
Sbjct: 1243 GMMKIGDHQFRIPYTFAFPLRLGGGEQLILGCNFIRAMQGGLRIEGDEVTFYKNVTTIKT 1302

Query: 500  HQLTATAPAXXXXXXXXXEYLHIQEQVNIVEAYQPGTHFKRLLTKLTEAGY 348
             Q+ +   A         E++ + E +++V   QP   ++ +L+++ + GY
Sbjct: 1303 QQMVSKVLALEELEMTEDEFIEVNETLSVV-GRQPQPKYEAILSRMKQQGY 1352


>gb|ASA40116.1| ORF3 [Dioscorea bacilliform RT virus 2]
          Length = 1892

 Score =  273 bits (699), Expect = 7e-76
 Identities = 162/411 (39%), Positives = 227/411 (55%), Gaps = 16/411 (3%)
 Frame = -1

Query: 1532 QTNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDK----CKCCGRVTMKKDRM 1365
            + N+Y +G  GGWR  V+VT ++H+C+H W         Y++    C+ C R  MK+   
Sbjct: 962  EDNTYWLGG-GGWRFAVKVTPQEHNCAHSWSY-------YEEQSRTCRFCKREVMKRFNA 1013

Query: 1364 HCSKCLITSCGMCSSNYFDITIPVEREQPIP-YKPFALIREQQAYIAWSDNEMERLRQEI 1188
            HCSKC IT+CGMCS++Y    IP ++E+  P Y+P  L+ EQ  YI   + E+ RL+QE+
Sbjct: 1014 HCSKCSITTCGMCSNHYLGFQIPCQQEEVRPVYEPRQLMNEQMTYIKHCEEEIARLKQEV 1073

Query: 1187 KTVKALAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENHDLRGQ 1008
               K L+                      + E   L  E E L+ + + L+LE  DL   
Sbjct: 1074 AAAKILSE-----------NEIVSMKIREAVETDTLRKENETLRLENERLQLEVADLNKI 1122

Query: 1007 IS-KQPVPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKT--------NGLFNMT 855
            I  KQP+ I                              + K +         NGL+N+ 
Sbjct: 1123 IKGKQPI-IPEDEELEELKQQVQQLKKSLEEKRLGVIICEGKGEQVLATTSSRNGLYNLV 1181

Query: 854  VEIDLPGMAKFQVNAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKN 675
            VE+ +PG+  F VNAIL TGAT CCI++  +PK A+E+NTF V F+G NS  KA KKLK 
Sbjct: 1182 VELSIPGILPFSVNAILDTGATNCCINEEGLPKGALEDNTFEVTFTGANSVMKANKKLKG 1241

Query: 674  GSMRIGEHSFRIPYTYAFPLTLGGNITMILGCNFIRS--GGLRIEGDEVTFYKNVTTIKT 501
            G M+IG+H FRIPYT+AFPL LGG   +ILGCNFIR+  GGLRIEGDEVTFYKNVTTIKT
Sbjct: 1242 GMMKIGDHQFRIPYTFAFPLRLGGGEQLILGCNFIRAMQGGLRIEGDEVTFYKNVTTIKT 1301

Query: 500  HQLTATAPAXXXXXXXXXEYLHIQEQVNIVEAYQPGTHFKRLLTKLTEAGY 348
             Q+ +   A         E++ + E ++++   QP   ++ +L+++ + GY
Sbjct: 1302 QQMVSKVLALEELEMTEDEFIEMNETLSVM-GRQPQPKYEAILSRMKQQGY 1351


>gb|ANV20902.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1893

 Score =  272 bits (696), Expect = 2e-75
 Identities = 162/411 (39%), Positives = 226/411 (54%), Gaps = 16/411 (3%)
 Frame = -1

Query: 1532 QTNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDK----CKCCGRVTMKKDRM 1365
            + N+Y +G  GGWR  V+VT ++H+C+H W         Y++    C+ C R  MK+   
Sbjct: 963  EDNTYWLGG-GGWRFAVKVTPQEHNCAHSWSY-------YEEQSRTCRFCKREVMKRFNA 1014

Query: 1364 HCSKCLITSCGMCSSNYFDITIPVEREQPIP-YKPFALIREQQAYIAWSDNEMERLRQEI 1188
            HCSKC IT+CGMCS++Y    IP ++E+  P Y+P  L+ EQ  YI   + E+ RL+QE+
Sbjct: 1015 HCSKCSITTCGMCSNHYLGFQIPCQQEEVRPVYEPRQLMNEQMTYIKHCEEEIARLKQEV 1074

Query: 1187 KTVKALAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENHDLRGQ 1008
               K L+                      + E   L  E E L+ + + L+LE  DL   
Sbjct: 1075 AAAKILSE-----------NEIVSMKIREAVETDTLRKENETLRLENERLQLEVADLNKI 1123

Query: 1007 IS-KQPVPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKT--------NGLFNMT 855
            I  KQP+ I                              + K +         NGL+N+ 
Sbjct: 1124 IKGKQPI-IPEDEELEELKQQVQQLKKSLEEKRLGVIICEGKGEQVLATTSSRNGLYNLV 1182

Query: 854  VEIDLPGMAKFQVNAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKN 675
            VE+ +PG+  F VNAIL TGAT CCI++  +PK A+E+NTF V F+G NS  KA KKLK 
Sbjct: 1183 VELSIPGILPFSVNAILDTGATNCCINEEGLPKGALEDNTFEVTFTGANSVMKANKKLKG 1242

Query: 674  GSMRIGEHSFRIPYTYAFPLTLGGNITMILGCNFIRS--GGLRIEGDEVTFYKNVTTIKT 501
            G M+IG+H FRIPYT+AFPL LGG   +ILGCNFIR+  G LRIEGDEVTFYKNVTTIKT
Sbjct: 1243 GMMKIGDHQFRIPYTFAFPLRLGGGEQLILGCNFIRAMQGRLRIEGDEVTFYKNVTTIKT 1302

Query: 500  HQLTATAPAXXXXXXXXXEYLHIQEQVNIVEAYQPGTHFKRLLTKLTEAGY 348
             Q+ +   A         E++ + E +++V   QP   ++ +L+++ + GY
Sbjct: 1303 QQMVSKVLALEELEMTEDEFIEVNETLSVV-GRQPQPKYEAILSRMKQQGY 1352


>gb|ANV20899.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1892

 Score =  270 bits (689), Expect = 1e-74
 Identities = 161/411 (39%), Positives = 226/411 (54%), Gaps = 16/411 (3%)
 Frame = -1

Query: 1532 QTNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDK----CKCCGRVTMKKDRM 1365
            + N+Y +G  GGWR  V+VT ++H+C+H W         Y++    C+ C R  MK+   
Sbjct: 965  EDNTYWLGG-GGWRFAVKVTPQEHNCAHSWSY-------YEEQSRTCRFCKREVMKRFNA 1016

Query: 1364 HCSKCLITSCGMCSSNYFDITIPVEREQPIP-YKPFALIREQQAYIAWSDNEMERLRQEI 1188
            HCSKC IT+CGMCS++Y    IP ++E+  P Y+P  L+ EQ   I   + E+ RL+QE+
Sbjct: 1017 HCSKCSITTCGMCSNHYLWFQIPCQQEEVRPVYEPRQLMNEQMTCIKHCEEEIARLKQEV 1076

Query: 1187 KTVKALAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENHDLRGQ 1008
               K L+                      + E   L  E E L+ + + L+LE  DL   
Sbjct: 1077 AAAKILSE-----------NEIVSMKIREAVETDTLRKENETLRLENERLQLEVADLNKI 1125

Query: 1007 IS-KQPVPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKT--------NGLFNMT 855
            I  KQP+ I                              + K +         NGL+N+ 
Sbjct: 1126 IKGKQPI-IPEDEELEELKQQVQQLKKSLEEKRLGVIICEGKGEQVLATTSSRNGLYNLV 1184

Query: 854  VEIDLPGMAKFQVNAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKN 675
            VE+ +PG+  F VNAIL TGAT CCI++  +PK A+E+NTF V F+G NS  KA KKLK 
Sbjct: 1185 VELSIPGILPFSVNAILDTGATNCCINEEGLPKGALEDNTFEVTFTGANSVMKANKKLKG 1244

Query: 674  GSMRIGEHSFRIPYTYAFPLTLGGNITMILGCNFIRS--GGLRIEGDEVTFYKNVTTIKT 501
            G M+IG+H FRIPYT+AFPL LGG   +ILGCNFIR+  GGLRIEGDEVTFYKNVTTIKT
Sbjct: 1245 GMMKIGDHQFRIPYTFAFPLRLGGGEQLILGCNFIRAMQGGLRIEGDEVTFYKNVTTIKT 1304

Query: 500  HQLTATAPAXXXXXXXXXEYLHIQEQVNIVEAYQPGTHFKRLLTKLTEAGY 348
             Q+ +   A         E++ + E ++++   QP   ++ +L+++ + GY
Sbjct: 1305 QQMVSKVLALEELEMTEDEFIEVNETLSVM-GRQPQPKYEAILSRMKQQGY 1354


>gb|ATW01249.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1904

 Score =  268 bits (684), Expect = 6e-74
 Identities = 160/436 (36%), Positives = 228/436 (52%), Gaps = 11/436 (2%)
 Frame = -1

Query: 1565 QGKSPVAMAH-----EQTNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDKCK 1401
            Q  +P+   H     ++   Y +G  GGWR  V+VT+++HDC H WE     T     C+
Sbjct: 1002 QSLNPILQHHLLYLRQEDGKYFLGG-GGWRAAVQVTQQEHDCRHQWEYYLLNT---GSCR 1057

Query: 1400 CCGRVTMKKDRMHCSKCLITSCGMCSSNYFDITIPVEREQPIPYKPFALIREQQAYIAWS 1221
             C +   K+    C  C I +CG CS +Y  + IP ++E+   Y P  L+ EQQ YI + 
Sbjct: 1058 FCRKEITKRWHAKCMHCSIVTCGFCSQHYVQLEIPCQKEEVQIYNPHRLLYEQQEYIKFC 1117

Query: 1220 DNEMERLRQEIKTVKALAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADA 1041
            + EME+L+   K  + +A                      + E   L  E+  +K + D 
Sbjct: 1118 EVEMEKLKNAAKAAEKIAE-----------DKILAASIRNAVEIEELRKELATVKLEKDR 1166

Query: 1040 LELENHDLRGQISKQPVPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKTNGLFN 861
            LELEN DL+  + +                                     K K NGL+N
Sbjct: 1167 LELENKDLKRILEESE---------------QVNVLICDGREKLVTASLASKEKRNGLYN 1211

Query: 860  MTVEIDLPGMAKFQVNAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKL 681
            +TV++++PG A   VNAIL TGAT CCI++  +PKE +EENTF V  +G NS+  A KKL
Sbjct: 1212 LTVQLEIPGSAPISVNAILDTGATNCCINEEGLPKEILEENTFEVKLTGANSEMVARKKL 1271

Query: 680  KNGSMRIGEHSFRIPYTYAFPLTLGGNITMILGCNFIR--SGGLRIEGDEVTFYKNVTTI 507
            KNG MRIG++ FRIPYT+AFPL LGG   +I+GCNFIR  +GG+RIEGD VTFYKNVTT+
Sbjct: 1272 KNGIMRIGDNQFRIPYTFAFPLRLGGGEQLIIGCNFIRAMNGGVRIEGDTVTFYKNVTTV 1331

Query: 506  KTHQLTATAPAXXXXXXXXXEYLHIQEQVNIVEAYQPGTHF----KRLLTKLTEAGYEAL 339
            KT Q      A         EY+ +Q+ V+ +E   P  +F     ++L +L +AGY  +
Sbjct: 1332 KTQQQVPKLLALEELEMNEDEYIELQQSVSAIE---PSNYFSNKLSQVLQELKQAGY--I 1386

Query: 338  GTESSQVQIRN*ESCD 291
            G +  +   +N  +C+
Sbjct: 1387 GDDPLKFWSKNQVTCE 1402


>gb|AHG32725.1| ORF3, partial [Dioscorea rotundata]
          Length = 1257

 Score =  264 bits (674), Expect = 7e-73
 Identities = 159/436 (36%), Positives = 227/436 (52%), Gaps = 11/436 (2%)
 Frame = -1

Query: 1565 QGKSPVAMAH-----EQTNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDKCK 1401
            Q  +PV   H     ++   Y +G  GGWR  V+VT+++HDC H WE     T     C+
Sbjct: 354  QSLNPVIQHHLLYLRQEDGKYFLGG-GGWRAAVQVTQQEHDCRHQWEYYILNT---GSCR 409

Query: 1400 CCGRVTMKKDRMHCSKCLITSCGMCSSNYFDITIPVEREQPIPYKPFALIREQQAYIAWS 1221
             C +   K+    C  C I +CG CS +Y  + IP ++E+   Y P  L+ EQQ YI + 
Sbjct: 410  FCRKEITKRWHAKCMHCSIVTCGFCSQHYVQLEIPCQKEEVQIYNPHRLLYEQQEYIKFC 469

Query: 1220 DNEMERLRQEIKTVKALAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADA 1041
            + E+E+ +   K  + +A                      + E   L  E+  +K + D 
Sbjct: 470  EVEIEKWKNSAKASEKVAE-----------DKILAASIRHAVEVEELRKELAAVKLEKDR 518

Query: 1040 LELENHDLRGQISKQPVPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKTNGLFN 861
            LELEN DL+  + +                                     K K NGL+N
Sbjct: 519  LELENRDLKRILEESE--------------QVNVLICDGREKKITTASLASKEKRNGLYN 564

Query: 860  MTVEIDLPGMAKFQVNAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKL 681
            +TV++++PG A   VNAIL TGAT CCI++  +PKE +EENTF V  +G NS+  A KKL
Sbjct: 565  LTVQLEIPGSAPINVNAILDTGATNCCINEEGLPKEILEENTFEVKLTGANSEMVAKKKL 624

Query: 680  KNGSMRIGEHSFRIPYTYAFPLTLGGNITMILGCNFIR--SGGLRIEGDEVTFYKNVTTI 507
            KNG MRIG++ FRIPYT+AFPL LGG   +I+GCNFIR  +GG+RIEGD VTFYKNVTT+
Sbjct: 625  KNGIMRIGDNQFRIPYTFAFPLRLGGGEQLIIGCNFIRAMNGGVRIEGDTVTFYKNVTTV 684

Query: 506  KTHQLTATAPAXXXXXXXXXEYLHIQEQVNIVEAYQPGTHF----KRLLTKLTEAGYEAL 339
            KT Q      A         EY+ +Q+ V+ +E   P  +F     ++L +L +AGY  +
Sbjct: 685  KTQQQVPKLLALEELEMDEDEYIELQQSVSAIE---PSNYFSNKLSQVLQELKQAGY--I 739

Query: 338  GTESSQVQIRN*ESCD 291
            G +  +   +N  +C+
Sbjct: 740  GDDPLKFWSKNQVTCE 755


>gb|ASA40120.1| ORF3 [Dioscorea bacilliform virus]
          Length = 2005

 Score =  259 bits (663), Expect = 4e-71
 Identities = 142/364 (39%), Positives = 205/364 (56%), Gaps = 20/364 (5%)
 Frame = -1

Query: 1532 QTNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDKCKCCGRVTMKKDRMHCSK 1353
            +  +Y IGK   WR  V+V+K  HDC H WE++ P+     +C CC R T +  R +CS+
Sbjct: 1096 EDGTYWIGKDDNWRVQVKVSKTVHDCPHSWELHPPMLGQVPRCLCCKRDTQENWRAYCSR 1155

Query: 1352 CLITSCGMCSSNYFDITIPVEREQPIPYKPFALIREQQAYIAWSDNEMERLRQEIKTVKA 1173
            C   +CGMC  NYF++T+PV++  P  +    ++ +QQ YI W+++E+ RL+ E++ +K 
Sbjct: 1156 CQTVTCGMCGPNYFNLTVPVKKATPAFFDHKPMLEQQQLYIKWAESEIARLKGELEILKT 1215

Query: 1172 LAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELK-------FKADALELENHDLR 1014
             +                       A R+ +DTE EEL+        K DALELENHD +
Sbjct: 1216 TSEAKLKASEEEASRQKD-------AMRLEVDTENEELRHRVALLELKNDALELENHDHK 1268

Query: 1013 GQISKQPVPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-----------QPKRKTNGL 867
             +I +  + I+                                        +P+R  N L
Sbjct: 1269 VRIGELELQIEGHELAEKMAAEEEEANAAEETVAYLIEEENEKICSAETAIRPRRGGNKL 1328

Query: 866  FNMTVEIDLPGMAKFQVNAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATK 687
            +N+T EI +PG+  F++ AIL TGATTCC+D  ++PKEA+EE+ F   F+ IN+ + A  
Sbjct: 1329 YNLTAEIIIPGVPPFKLRAILDTGATTCCVDIKAVPKEALEESAFQARFNSINATSVANL 1388

Query: 686  KLKNGSMRIGEHSFRIPYTYAFPLTLGGNITMILGCNFIRS--GGLRIEGDEVTFYKNVT 513
            KLK G+M+I  ++FRIPY Y F L L  ++ MILGCNFIRS  GG+RIEG++VTFYKNVT
Sbjct: 1389 KLKPGTMKIEGNTFRIPYAYTFTLKL-DDVQMILGCNFIRSMGGGVRIEGNDVTFYKNVT 1447

Query: 512  TIKT 501
            TIKT
Sbjct: 1448 TIKT 1451


>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
          Length = 1846

 Score =  254 bits (650), Expect = 2e-69
 Identities = 160/399 (40%), Positives = 209/399 (52%), Gaps = 8/399 (2%)
 Frame = -1

Query: 1520 YMIGKT-GGWRPMVRVTKEQHDCSHIWEMNGPITP-PYDKCKCCGRVTMKKDRMHCSKCL 1347
            +M+G+  GGWRP ++V+ EQ  C H WE NG I    Y KC  C   TMK+ R+HC KC 
Sbjct: 873  FMLGEEDGGWRPKIKVSDEQLACQHKWEHNGEIQQFVYLKCLGCQCPTMKRARIHCPKCK 932

Query: 1346 ITSCGMCSSNYFDITIPVEREQPIPYKPFALIREQQAYIAWSDNEMERLRQEIKTVKALA 1167
             T+C +C   YF   +PV    P P  P  LI EQQ +I W + E+ERL +E+   K L 
Sbjct: 933  ATACNLCGPYYFKKEVPVAPPPPTPMNPRKLIMEQQNHIQWCEVEIERLEKEVSYWKKL- 991

Query: 1166 ALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENHDLRGQISKQPVP 987
                                      +     IE+L+     L  E+ + R + +K  + 
Sbjct: 992  ----------------------YENALRATGVIEDLQKDYKELLSEDEEKRKRRAKGVMI 1029

Query: 986  IKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKT-NGLFNMTVEIDLPGMAKFQVNA 810
            I+                             +PK+   N L+N  + ID+PG+ KF V A
Sbjct: 1030 IEEGEQANFLQEEKVNKVAVQEEQ-------RPKKMVRNMLYNFIISIDIPGIDKFSVKA 1082

Query: 809  ILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKNGSMRIGEHSFRIPYT 630
            IL TGATTCCIDQ SIPKEA+EENT++V FSG+NS   A KKLK G M IGE+ FRIPYT
Sbjct: 1083 ILDTGATTCCIDQESIPKEALEENTYLVRFSGVNSTMTANKKLKGGRMFIGENMFRIPYT 1142

Query: 629  YAFPLTLGGNITMILGCNFIRS--GGLRIEGDEVTFYKNVTTIKTHQLTATAPAXXXXXX 456
            Y+FP+ +   + MI+GCNFIR+  GG+RIEG+ VTFYKN+T I T Q T  A        
Sbjct: 1143 YSFPIKMEDGVQMIVGCNFIRAMYGGVRIEGNVVTFYKNLTVINTSQSTEIARMLQEDVD 1202

Query: 455  XXXEYLHIQEQVNIVEAYQPGTHFKR---LLTKLTEAGY 348
                +  IQE V I       +  KR   L+ +L EAGY
Sbjct: 1203 DEELW-QIQEAVYINIGKSRESFLKRFEALINQLKEAGY 1240


>ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus]
 gb|ABI47983.1| ORF3 protein [Dioscorea bacilliform SN virus]
          Length = 1887

 Score =  254 bits (648), Expect = 4e-69
 Identities = 149/402 (37%), Positives = 213/402 (52%), Gaps = 6/402 (1%)
 Frame = -1

Query: 1535 EQTNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDKCKCCGRVTMKKDRMHCS 1356
            E+   + +G  GGWR  V+VT ++HDC H WE     T     CK C R   ++    C 
Sbjct: 1003 EEDGKHFLGG-GGWRAAVQVTPQEHDCHHQWEYYILNT---GLCKFCKRDITQRWHAKCM 1058

Query: 1355 KCLITSCGMCSSNYFDITIPVEREQPIPYKPFALIREQQAYIAWSDNEMERLRQEIKTVK 1176
             C + +CG CS +Y D+ IP +RE+   Y P  L++EQQ YI   + E+E+L++ +K   
Sbjct: 1059 HCNLVTCGFCSQHYLDLEIPCQREEVQVYNPQRLLQEQQNYIQVCEVEIEKLKESVKAAN 1118

Query: 1175 ALAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENHDLRGQISKQ 996
             +A                      + E   L  +++ +K   + LELEN DL+  + + 
Sbjct: 1119 KIAE-----------DKIMAASIRHAVELEELRKQLQAIKLDKERLELENPDLKKILEE- 1166

Query: 995  PVPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKTNGLFNMTVEIDLPGMAKFQV 816
                                             +  K + NGL+N+ V++++PG A  QV
Sbjct: 1167 ---------------FEQVNVLICDGREKSERIASIKERRNGLYNLMVQLEIPGAAPIQV 1211

Query: 815  NAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKNGSMRIGEHSFRIP 636
            NAIL TGATTCCI++  +PK  +E NTF V F+G NS+  A KKLK G M+IG++ FRIP
Sbjct: 1212 NAILDTGATTCCINEEGLPKAILEANTFEVKFTGANSEMVARKKLKGGIMKIGDNQFRIP 1271

Query: 635  YTYAFPLTLGGNITMILGCNFIR--SGGLRIEGDEVTFYKNVTTIKTHQLTATAPAXXXX 462
            YT+AFPL LGG   +I+GCNFIR  +GG+RIEGD VTFYKNVTTI+T Q      A    
Sbjct: 1272 YTFAFPLKLGGGEQLIIGCNFIRAMNGGVRIEGDTVTFYKNVTTIQTQQQVPKLLALEEL 1331

Query: 461  XXXXXEYLHIQEQVNIVEAYQPGTHFKRLLT----KLTEAGY 348
                 EY+ +Q+ ++ +E   P  +F   L+    +L  AGY
Sbjct: 1332 EMDEDEYIELQQSISSIE---PNNYFSNKLSQVFQELKAAGY 1370


>gb|ANV20884.1| ORF3 protein [Dioscorea bacilliform AL virus]
          Length = 1914

 Score =  251 bits (642), Expect = 2e-68
 Identities = 152/402 (37%), Positives = 218/402 (54%), Gaps = 8/402 (1%)
 Frame = -1

Query: 1529 TNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDKCKCCGRVTMKKDRMHCSKC 1350
            T+ Y+ G  GG +  V+VT+++HDC+H W + G        C+ C R  M++    C+KC
Sbjct: 1011 THYYLGG--GGTKVSVKVTQKEHDCTHDWVLYGENNA---HCRFCRREVMQRWNAKCNKC 1065

Query: 1349 LITSCGMCSSNYFDITIPVER-EQPIPYKPFALIREQQAYIAWSDNEMERLRQEIKTVKA 1173
             IT+CGMCS +Y  + +P +R E    Y+P  L+ EQ+ YI   + E+ RL+ EI+ +K 
Sbjct: 1066 DITTCGMCSDHYVGLRVPCKRPEVQQVYQPTNLLVEQRNYIMSCEEEIARLKNEIEAMKI 1125

Query: 1172 LAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENHDLRGQISKQP 993
             +                      + E   L  E++ LK + D L LEN D R ++ K+ 
Sbjct: 1126 SSE-----------NQLVAEKIARAVEEEHLKKEVQALKLENDRLTLENEDQRKELEKKN 1174

Query: 992  VPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKTNGLFNMTVEIDLPGMAKFQVN 813
              +                              Q +R  NGL+N+ VE+++PG A  +VN
Sbjct: 1175 KEVLDLQSYIEEHDVNVLICEGNDKQVAASIPVQDRR--NGLYNLIVELEIPGCAPLKVN 1232

Query: 812  AILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKNGSMRIGEHSFRIPY 633
            AIL TGATTCCI+   +PKE +E+NTF V F+G NS  KA KKLK G M+I  H FRIPY
Sbjct: 1233 AILDTGATTCCINSEGLPKEMMEDNTFTVKFTGANSVMKADKKLKYGMMKIEGHVFRIPY 1292

Query: 632  TYAFPLTLGGNITMILGCNFIRS--GGLRIEGDEVTFYKNVTTIKTHQLTATAPAXXXXX 459
            T+AFPL LGG   +++GCNFIRS  GG+RIEG++VTFYKN+TT+KT        A     
Sbjct: 1293 TFAFPLRLGGGEQLVIGCNFIRSMNGGVRIEGNDVTFYKNITTVKTQTEVPKILALEELE 1352

Query: 458  XXXXEYLHIQEQVN-----IVEAYQPGTHFKRLLTKLTEAGY 348
                EYL +Q + +     I E ++    ++ L+ +L  AGY
Sbjct: 1353 MEEEEYLALQSKYSSICPVIQENFK--ARYEELIVQLKNAGY 1392


>gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus]
          Length = 1395

 Score =  247 bits (631), Expect = 5e-67
 Identities = 150/400 (37%), Positives = 214/400 (53%), Gaps = 6/400 (1%)
 Frame = -1

Query: 1529 TNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDKCKCCGRVTMKKDRMHCSKC 1350
            T+ Y+ G  GG +  V+VT+++HDC+H W +    +     C+ C R  M++    CSKC
Sbjct: 498  THYYLGG--GGTKVSVKVTQKEHDCTHDWVL---YSENNSNCRFCKREVMQRWNAKCSKC 552

Query: 1349 LITSCGMCSSNYFDITIPVER-EQPIPYKPFALIREQQAYIAWSDNEMERLRQEIKTVKA 1173
             IT+CGMCS +Y  + +P +R E    Y+P  L+ EQ+ YI   + E+ RL+ EI+ +K 
Sbjct: 553  NITTCGMCSDHYVGLRVPCKRPEVQQVYQPTNLLAEQRNYIMSCEEEISRLKNEIEAMKI 612

Query: 1172 LAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENHDLRGQISKQP 993
             +                      +AE   L  E+  LK + D L LEN D + ++ K+ 
Sbjct: 613  SSE-----------NQLVAEKMARAAEEENLKKEVLALKLENDRLTLENEDQKKELEKKN 661

Query: 992  VPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKTNGLFNMTVEIDLPGMAKFQVN 813
              +                              Q +R  NGL+N+ VE+++PG A  +VN
Sbjct: 662  KEVLDLQSYIEEHDVNVLICEGNDKQVAASIPVQDRR--NGLYNLVVELEIPGCAPLKVN 719

Query: 812  AILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKNGSMRIGEHSFRIPY 633
            AIL TGATTCCI+   +PKE +E+NTF V F+G NS   A KKLK G M+I  H FRIPY
Sbjct: 720  AILDTGATTCCINSEGLPKEMVEDNTFKVKFTGANSVMIAEKKLKYGMMKIEGHVFRIPY 779

Query: 632  TYAFPLTLGGNITMILGCNFIRS--GGLRIEGDEVTFYKNVTTIKTHQLTATAPAXXXXX 459
            T+AFPL LGG   +++GCNFIRS  GG+RIEG++VTFYKN+TT+KT        A     
Sbjct: 780  TFAFPLRLGGGEQLVIGCNFIRSMNGGVRIEGNDVTFYKNITTVKTQTEVPKILALEELE 839

Query: 458  XXXXEYLHIQEQV-NIVEAYQPG--THFKRLLTKLTEAGY 348
                EY+ +Q    +I    Q      ++ L+ +L  AGY
Sbjct: 840  MEEEEYIALQSTYSSICPVVQDNFKARYEELIVQLKNAGY 879


>gb|ANV20881.1| ORF3 protein [Dioscorea bacilliform AL virus]
          Length = 1897

 Score =  245 bits (625), Expect = 4e-66
 Identities = 147/402 (36%), Positives = 216/402 (53%), Gaps = 8/402 (1%)
 Frame = -1

Query: 1529 TNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDKCKCCGRVTMKKDRMHCSKC 1350
            T+ Y+ G  GG +  ++VT+++HDC+H W + G       +C+ C R  M++    C+KC
Sbjct: 1000 THYYLGG--GGTKVSIKVTQKEHDCTHDWVLYGENN---SQCRFCKREVMQRWNAKCNKC 1054

Query: 1349 LITSCGMCSSNYFDITIPVER-EQPIPYKPFALIREQQAYIAWSDNEMERLRQEIKTVKA 1173
             IT+CGMCS +Y  + +P +R E    Y+P  L+ EQ+ YI   + E+ RL+ EI+ +K 
Sbjct: 1055 NITTCGMCSDHYVGLRVPCKRPEVQQVYQPTNLLAEQRNYIMSCEEEISRLKNEIEAMKI 1114

Query: 1172 LAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENHDLRGQISKQP 993
             +                      + E   L  E+  LK + D L LEN D + ++ K+ 
Sbjct: 1115 SSE-----------NQLVAEKIARAVEEDHLKKEVLALKLENDRLTLENEDQKKELEKKN 1163

Query: 992  VPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKTNGLFNMTVEIDLPGMAKFQVN 813
              +                              Q +R  NGL+N+ VE+++PG A  +VN
Sbjct: 1164 KEVLDLQSYIEEHDVNVLICEGNDKQVAASIPVQDRR--NGLYNLIVELEIPGCAPLKVN 1221

Query: 812  AILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKNGSMRIGEHSFRIPY 633
            AIL TGATTCCI+   +PKE +E+NTF V F+G NS   A KKLK G M+I  H FRIPY
Sbjct: 1222 AILDTGATTCCINSEGLPKEMMEDNTFKVKFTGANSVMVAEKKLKYGMMKIEGHVFRIPY 1281

Query: 632  TYAFPLTLGGNITMILGCNFIRS--GGLRIEGDEVTFYKNVTTIKTHQLTATAPAXXXXX 459
            T+AFPL LGG   +++GCNFIRS  GG+RIEG++VTFYKN+TT+KT        A     
Sbjct: 1282 TFAFPLRLGGGEQLVIGCNFIRSMNGGVRIEGNDVTFYKNITTVKTQTEVPKILALEELE 1341

Query: 458  XXXXEYLHIQEQVNIV-----EAYQPGTHFKRLLTKLTEAGY 348
                EY+ +Q   + +     E ++    ++ L+ +L  AGY
Sbjct: 1342 MEEEEYIALQSTYSTICPVVQENFK--ARYEELIIQLKNAGY 1381


>gb|ANV20878.1| ORF3 protein [Dioscorea bacilliform AL virus]
          Length = 1897

 Score =  244 bits (624), Expect = 5e-66
 Identities = 147/402 (36%), Positives = 216/402 (53%), Gaps = 8/402 (1%)
 Frame = -1

Query: 1529 TNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDKCKCCGRVTMKKDRMHCSKC 1350
            T+ Y+ G  GG +  ++VT+++HDC+H W + G       +C+ C R  M++    C+KC
Sbjct: 1000 THYYLGG--GGTKVSIKVTQKEHDCTHDWVLYGENN---SQCRFCKREVMQRWNAKCNKC 1054

Query: 1349 LITSCGMCSSNYFDITIPVER-EQPIPYKPFALIREQQAYIAWSDNEMERLRQEIKTVKA 1173
             IT+CGMCS +Y  + +P +R E    Y+P  L+ EQ+ YI   + E+ RL+ EI+ +K 
Sbjct: 1055 NITTCGMCSDHYVGLRVPCKRPEVQQVYQPTNLLAEQRNYIMSCEEEISRLKNEIEAMKI 1114

Query: 1172 LAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENHDLRGQISKQP 993
             +                      + E   L  E+  LK + D L LEN D + ++ K+ 
Sbjct: 1115 SSE-----------NQLVAEKIARAVEEDHLKKEVLALKLENDRLTLENEDQKKELEKKN 1163

Query: 992  VPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKTNGLFNMTVEIDLPGMAKFQVN 813
              +                              Q +R  NGL+N+ VE+++PG A  +VN
Sbjct: 1164 KEVLDLQSYIEEHDVNVLICEGNDKQVAASIPVQDRR--NGLYNLIVELEIPGCAPLKVN 1221

Query: 812  AILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKNGSMRIGEHSFRIPY 633
            AIL TGATTCCI+   +PKE +E+NTF V F+G NS   A KKLK G M+I  H FRIPY
Sbjct: 1222 AILDTGATTCCINSEGLPKEMMEDNTFKVKFTGANSVMIAEKKLKYGMMKIEGHVFRIPY 1281

Query: 632  TYAFPLTLGGNITMILGCNFIRS--GGLRIEGDEVTFYKNVTTIKTHQLTATAPAXXXXX 459
            T+AFPL LGG   +++GCNFIRS  GG+RIEG++VTFYKN+TT+KT        A     
Sbjct: 1282 TFAFPLRLGGGEQLVIGCNFIRSMNGGVRIEGNDVTFYKNITTVKTQTEVPKILALEELE 1341

Query: 458  XXXXEYLHIQEQVNIV-----EAYQPGTHFKRLLTKLTEAGY 348
                EY+ +Q   + +     E ++    ++ L+ +L  AGY
Sbjct: 1342 MEEEEYIALQSTYSTICPVVQENFK--ARYEELIIQLKNAGY 1381


>gb|ATZ69506.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
          Length = 1839

 Score =  236 bits (602), Expect = 4e-63
 Identities = 152/422 (36%), Positives = 220/422 (52%), Gaps = 9/422 (2%)
 Frame = -1

Query: 1532 QTNSYMIGKTGGWRPMVRVTKEQHDCSHIWEMNGPITPPYDKCKCCGRVTMKKDRMHCSK 1353
            Q   Y +GK+ G+ PMV V+KEQ+ C+H W  N  I  PY KC  C +V  ++ R HCS+
Sbjct: 874  QKREYWLGKSEGYLPMVAVSKEQYKCNHAWNDNQEIPIPYLKCHFCKQVPDRRSRSHCSQ 933

Query: 1352 CLITSCGMCSSNYFDITI---PVEREQPIPYKPFALIREQQAYIAWSDNEMERLRQEIKT 1182
            C +T+C MCS +Y    I   P    + +P +P +LI++Q  YI+    E ++L+Q+I+ 
Sbjct: 934  CFLTTCLMCSQHYTGRQIKPAPPLEPRKLPIQP-SLIQQQAEYISQLVAENKQLKQQIEY 992

Query: 1181 VKALAALXXXXXXXXXXXXXXXXXXXXSAERMALDTEIEELKFKADALELENHDLRGQIS 1002
             K  A                        + ++    I EL+   DA ++         S
Sbjct: 993  WKEKAQ------------------GKAKVQEVSTPLTIRELQ---DAAKVGGESSSEPSS 1031

Query: 1001 KQPVPIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPKRKTNGLFNMTVEIDLPGMAKF 822
             +P P +                                 KTN L+NM + +++PG    
Sbjct: 1032 SEPFPKQPFPKPSTQEEGEIHIVAAGA-------------KTNNLYNMRIILEVPGEKPI 1078

Query: 821  QVNAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGINSQTKATKKLKNGSMRIGEHSFR 642
            +V AIL TGATTCCID  +IP+  +E+NTFVV+FSGINS + + KKLKNG MRIGE+SFR
Sbjct: 1079 EVKAILDTGATTCCIDLETIPEGLLEDNTFVVHFSGINSTSTSRKKLKNGRMRIGENSFR 1138

Query: 641  IPYTYAFPLTLGGNITMILGCNFIRS--GGLRIEGDEVTFYKNVTTIKTHQLTATAPAXX 468
            IPYTYAFP+ +   I MI+GCNFIR+  GGLRIEG+ +TFYK +T+++T  + A      
Sbjct: 1139 IPYTYAFPMKIADGIQMIIGCNFIRNMQGGLRIEGNTITFYKFLTSVQTSTIAA---VIE 1195

Query: 467  XXXXXXXEYLHIQEQVNIVEAYQPGTH----FKRLLTKLTEAGYEALGTESSQVQIRN*E 300
                   +YL + E +  VE  Q   H    FK ++  L + G+  +G    Q   +N  
Sbjct: 1196 EEEVEETDYLRLTE-ILAVETIQQDNHFSSRFKGVIEGLKQQGF--IGENPLQHWSKNRV 1252

Query: 299  SC 294
            +C
Sbjct: 1253 TC 1254


>gb|AHG32726.1| ORF3, partial [Dioscorea rotundata]
          Length = 579

 Score =  193 bits (490), Expect = 2e-50
 Identities = 106/203 (52%), Positives = 133/203 (65%), Gaps = 5/203 (2%)
 Frame = -1

Query: 887 KRKTNGLFNMTVEIDLPGMAKFQVNAILGTGATTCCIDQNSIPKEAIEENTFVVNFSGIN 708
           K + NGL+N+TVE+D+PG   F+VNAIL TGATTCCI++  +PKE +E++TF V F+G N
Sbjct: 9   KERRNGLYNLTVELDIPGAVPFKVNAILDTGATTCCINEEGLPKEILEDSTFEVKFTGAN 68

Query: 707 SQTKATKKLKNGSMRIGEHSFRIPYTYAFPLTLGGNITMILGCNFIRS--GGLRIEGDEV 534
           S   A KKLK G+MRIG+H FRIPYT+AFPL LGG   +ILGCNFIRS  GG+RIEGDEV
Sbjct: 69  SVMTARKKLKYGNMRIGDHHFRIPYTFAFPLKLGGGEQLILGCNFIRSMNGGVRIEGDEV 128

Query: 533 TFYKNVTTIKTHQLTATAPAXXXXXXXXXEYLHIQEQVNI---VEAYQPGTHFKRLLTKL 363
           TFYKNVTTIKT Q      A         EY+ +QE  +    V        F  L+ +L
Sbjct: 129 TFYKNVTTIKTQQEVPKVLALEELEMEEEEYIAMQESCSAICPVVNINFTQKFGDLIQEL 188

Query: 362 TEAGYEALGTESSQVQIRN*ESC 294
             AGY  +G E  +   +N  +C
Sbjct: 189 KNAGY--IGEEPMKFWAQNKVTC 209