BLASTX nr result

ID: Cheilocostus21_contig00000464 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00000464
         (970 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009382384.1| PREDICTED: membrane steroid-binding protein ...    71   2e-10
ref|XP_009400276.1| PREDICTED: membrane steroid-binding protein ...    63   1e-07
ref|XP_009384490.1| PREDICTED: membrane steroid-binding protein ...    61   6e-07

>ref|XP_009382384.1| PREDICTED: membrane steroid-binding protein 2-like [Musa acuminata
           subsp. malaccensis]
          Length = 266

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
 Frame = -1

Query: 967 KYVKVGTIKKTVPVTXXXXXXXXXXSTEHTTQATEDTSRPANH--ETKIDATNGLNTAVE 794
           KY KVGTIKKTVP T           TE T +AT+D+ +   H  ETK D     +T VE
Sbjct: 156 KYAKVGTIKKTVPETEGSNDGTSEI-TEKTLEATDDSDKRDRHSAETKKDGQAESSTNVE 214

Query: 793 NVTALKEDGVAGHGDEAEE-VEIKENGSAKSEEEIHRNA*SN*SSVGEG 650
           +    KEDG +GHGDE+E+  E+K +GS+   EE+   A       GEG
Sbjct: 215 HSEEPKEDGASGHGDESEQHAELKGHGSSDHGEEVGCGAEFKEVGTGEG 263


>ref|XP_009400276.1| PREDICTED: membrane steroid-binding protein 1-like [Musa acuminata
           subsp. malaccensis]
          Length = 256

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
 Frame = -1

Query: 970 SKYVKVGTIKKTVPVTXXXXXXXXXXSTEHTTQATEDTSRPANHETKID---ATNGLNTA 800
           SKY+KVGT+KKTVPVT          +TE T+QATED    A+H  +++    T  LN  
Sbjct: 160 SKYMKVGTVKKTVPVT-EGSEAGASGTTEQTSQATEDAGIQADHGAQMEEDVITEDLNAD 218

Query: 799 VENVTALKEDGVAGHGDEAEEVEIKENGSAKSEEE 695
            E+    KE G     D     E+KE GS+   EE
Sbjct: 219 SEHNPTSKEKGAGYSDDAGRRAEVKETGSSAEGEE 253


>ref|XP_009384490.1| PREDICTED: membrane steroid-binding protein 2-like [Musa acuminata
           subsp. malaccensis]
 ref|XP_018676263.1| PREDICTED: membrane steroid-binding protein 2-like [Musa acuminata
           subsp. malaccensis]
          Length = 258

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
 Frame = -1

Query: 970 SKYVKVGTIKK---TVPVTXXXXXXXXXXSTEHTTQATEDTSRPANHETKIDATNGLNTA 800
           SKYVKVGTIKK   T P T           TE +T+ T+ T R A H T+I   + + T 
Sbjct: 155 SKYVKVGTIKKTDETAPTTDGTDDGTTSQVTEKSTEITDGTDRQAEHSTEIKEDDPVETH 214

Query: 799 V--ENVTALKEDGVAGHGDEAEEVEIKENGSAKSEE 698
              ++    K+DG  GHGDEAE    KEN S++ +E
Sbjct: 215 ANRDHDEESKQDGRFGHGDEAEP---KENDSSELKE 247


Top