BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00000451
         (2352 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus] >...   170   8e-71
ref|NP_619548.1| unnamed protein product [Figwort mosaic virus] ...   165   2e-70
gb|AMN10080.1| reverse transcriptase [Angelica bushy stunt virus]     173   1e-69
ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia fl...   173   1e-69
gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]    166   6e-69
gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]    166   6e-69
dbj|BAS06276.1| polymerase polyprotein [Dahlia common mosaic virus]   166   7e-69
gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]                  160   8e-68
gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]            159   3e-67
gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]                      159   9e-67
gb|AQS27979.1| putative reverse transcriptase [Strawberry vein b...   157   5e-64
gb|ALF37644.1| putative reverse transcriptase [Strawberry vein b...   157   2e-63
emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]         157   2e-63
gb|AKB94071.1| ORF V protein [Strawberry vein banding virus]          157   3e-63
gb|ARO77050.1| ORFV protein [Strawberry vein banding virus]           157   4e-63
ref|YP_001931967.1| replicase [Eupatorium vein clearing virus] >...   146   2e-62
ref|NP_043933.1| hypothetical protein [Strawberry vein banding v...   155   7e-62
ref|YP_007761644.1| reverse transcriptase [Rose yellow vein viru...   170   5e-59
tpd|FAA01216.1| TPA: polyprotein [Sorghum bicolor]                    156   2e-51
ref|YP_006732334.1| polyprotein [Dahlia mosaic virus] >gi|323511...   167   2e-51

>ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus]
 gb|AAM53128.1| ORFV [Mirabilis mosaic virus]
          Length = 674

 Score =  170 bits (431), Expect(3) = 8e-71
 Identities = 87/182 (47%), Positives = 114/182 (62%), Gaps = 1/182 (0%)
 Frame = -3

Query: 1108 RRQKWFSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMDNI 929
            R +  FS F CKSGFWQ  ++ ES++LTAF+ PQGHY W V+ FGL+ AP IFQ  M + 
Sbjct: 324  RGKNIFSSFDCKSGFWQVLLDDESQKLTAFTCPQGHYQWRVVPFGLKQAPSIFQRHMQDA 383

Query: 928  FKKYSSFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGL 749
             +    FSLVYVDDI+++S N  +H  H+       +  GI+LS KK+   + KI+FLGL
Sbjct: 384  LRGLEEFSLVYVDDIIVFSDNKNDHQDHVMKVLRRIESLGIILSKKKANLFKEKINFLGL 443

Query: 748  EID*GRILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKKKAQ 572
            EID G    Q H +  I    D+IED KQLQR LG L YA  +I  LA+ R PLQ K  +
Sbjct: 444  EIDRGTHTPQNHILDHIHTFPDRIEDKKQLQRFLGVLTYADSYIPKLAEKRKPLQVKLKK 503

Query: 571  EE 566
            ++
Sbjct: 504  DQ 505



 Score = 87.0 bits (214), Expect(3) = 8e-71
 Identities = 47/105 (44%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
 Frame = -2

Query: 401 GNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTKP-FVARIDN-KVTISFI 228
           G E +C+++ GTFK AE+NYH NEKE  A+K  I K  I  T   F  R DN  +   F+
Sbjct: 561 GEELICRYSSGTFKPAELNYHSNEKELLAVKQVITKFSIYLTPVCFTVRTDNVNLLKGFM 620

Query: 227 NGSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDF 93
           N  I     + RLIR Q WFS + F ++H+ G +NVLA+ L R+F
Sbjct: 621 NKKITGDSKQGRLIRWQMWFSHYTFKVDHLKGEQNVLADYLTREF 665



 Score = 62.8 bits (151), Expect(3) = 8e-71
 Identities = 29/56 (51%), Positives = 40/56 (71%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK+ ++ WT  D + +KKIKK + +FPKL LP+ ED   IETDAS+  WG VL+
Sbjct: 500 KLKKDQVWIWTQSDTDYVKKIKKGLINFPKLYLPKKEDSLIIETDASDHFWGGVLK 555


>ref|NP_619548.1| unnamed protein product [Figwort mosaic virus]
 sp|P09523.1|POL_FMVD RecName: Full=Enzymatic polyprotein; Includes: RecName: Full=Aspartic
            protease; Includes: RecName: Full=Endonuclease; Includes:
            RecName: Full=Reverse transcriptase
 emb|CAA29527.1| unnamed protein product [Figwort mosaic virus]
          Length = 666

 Score =  165 bits (418), Expect(3) = 2e-70
 Identities = 82/177 (46%), Positives = 112/177 (63%), Gaps = 1/177 (0%)
 Frame = -3

Query: 1108 RRQKWFSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMDNI 929
            R +  FS F CKSGFWQ  +++ES++LTAF+ PQGH+ W V+ FGL+ AP IFQ  M   
Sbjct: 324  RGKSIFSSFDCKSGFWQVVLDEESQKLTAFTCPQGHFQWKVVPFGLKQAPSIFQRHMQTA 383

Query: 928  FKKYSSFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGL 749
                  F +VYVDDI+++S +  +H  H+       +K+GI+LS KK+   + KI+FLGL
Sbjct: 384  LNGADKFCMVYVDDIIVFSNSELDHYNHVYAVLKIVEKYGIILSKKKANLFKEKINFLGL 443

Query: 748  EID*GRILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKK 581
            EID G    Q H +  I    D++ED K LQR LG L YA+ +I  LA++R PLQ K
Sbjct: 444  EIDKGTHCPQNHILENIHKFPDRLEDKKHLQRFLGVLTYAETYIPKLAEIRKPLQVK 500



 Score = 90.5 bits (223), Expect(3) = 2e-70
 Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
 Frame = -2

Query: 401 GNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTKP-FVARIDNKVTISFIN 225
           G E +C+++ G+FK+AE NYH N+KE  A+K  I K     T   F  R DNK    F+ 
Sbjct: 561 GVELICRYSSGSFKQAEKNYHSNDKELLAVKQVITKFSAYLTPVRFTVRTDNKNFTYFLR 620

Query: 224 GSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDF 93
            ++K    + RL+R Q+WFS + F +EH+ G KNVLA+ L RDF
Sbjct: 621 INLKGDSKQGRLVRWQNWFSKYQFDVEHLEGVKNVLADCLTRDF 664



 Score = 62.8 bits (151), Expect(3) = 2e-70
 Identities = 29/56 (51%), Positives = 40/56 (71%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK+  ++WT  D++ +KKIKK +  FPKL LP+ ED   IETDAS+  WG VL+
Sbjct: 500 KLKKDVTWNWTQSDSDYVKKIKKNLGSFPKLYLPKPEDHLIIETDASDSFWGGVLK 555


>gb|AMN10080.1| reverse transcriptase [Angelica bushy stunt virus]
          Length = 703

 Score =  173 bits (438), Expect(3) = 1e-69
 Identities = 89/177 (50%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
 Frame = -3

Query: 1108 RRQKWFSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMDNI 929
            R +K FS   CKSGFWQ  ++++S+ LTAF+ PQGHY W V+ FG + AP IFQ  M N 
Sbjct: 359  RGKKVFSSLDCKSGFWQVLLDEDSQLLTAFTCPQGHYQWRVLPFGFKQAPSIFQRHMQNA 418

Query: 928  FKKYSSFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGL 749
               Y  F  VYVDDILI+S N  +H KH+     + ++ GI+LS KK+   + KI+FLGL
Sbjct: 419  LNSYEKFCCVYVDDILIFSDNEEDHQKHLAAVLKKCEQLGIILSKKKAQLFKTKINFLGL 478

Query: 748  EID*GRILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKK 581
            EID G    Q H +  I    DKIED KQLQR LG L YA  +I  LA  R PLQ K
Sbjct: 479  EIDQGTHRPQNHILEHIAKFPDKIEDKKQLQRFLGILTYASDYIPGLASKRAPLQVK 535



 Score = 91.3 bits (225), Expect(3) = 1e-69
 Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
 Frame = -2

Query: 401 GNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTKP-FVARIDNKVTISFIN 225
           G E +C++A G+FK AE  YH NEKE+ A+   I+K  I  T   F  R DNK    F+N
Sbjct: 596 GEELICRYASGSFKSAETRYHSNEKEYLAVIRVIKKFSIYLTPVHFTVRTDNKNFTHFMN 655

Query: 224 GSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDF 93
             I+    + RL+R Q W S + FT+EHI G+KNV A+ L R+F
Sbjct: 656 LQIQGDNKQGRLVRWQQWLSHYSFTVEHIEGSKNVFADFLTREF 699



 Score = 52.0 bits (123), Expect(3) = 1e-69
 Identities = 24/56 (42%), Positives = 36/56 (64%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK+  ++WT  D   + K+KK + +FPKL  P  +D   IETDAS+  WG +L+
Sbjct: 535 KLKKDISWNWTASDTSYVAKLKKGLNNFPKLYHPLPDDKLIIETDASQDYWGGILK 590


>ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia flower distortion virus]
 gb|ACL36982.1| putative enzymatic polyprotein [Rudbeckia flower distortion virus]
          Length = 701

 Score =  173 bits (438), Expect(3) = 1e-69
 Identities = 87/180 (48%), Positives = 116/180 (64%), Gaps = 1/180 (0%)
 Frame = -3

Query: 1117 SANRRQKWFSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRM 938
            +A R +K+FS   CKSGFWQ ++ + SK LTAFS P G Y WNV+ FGL+ AP +FQ  M
Sbjct: 353  TAIRGRKYFSTLDCKSGFWQIRLNENSKPLTAFSCPMGQYEWNVVPFGLKQAPGLFQRFM 412

Query: 937  DNIFKKYSSFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDF 758
            DN FK+YS+F  VYVDDIL++S  + EH  H+     +  + GI+LS KK+   + KI++
Sbjct: 413  DNSFKEYSAFCAVYVDDILVFSKTLDEHYDHLETVLRKCIETGIILSKKKAEVAKTKINY 472

Query: 757  LGLEID*GRILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKK 581
            LG  I  G I LQ H +  I+    +I D K LQR LG L YA  +I+ LA+ R PLQ+K
Sbjct: 473  LGFTISNGEIELQSHILENIKLFPSRIPDKKSLQRFLGILTYADQYIRKLAEWRKPLQRK 532



 Score = 93.2 bits (230), Expect(3) = 1e-69
 Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
 Frame = -2

Query: 395 EQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSE-ICFTKPFVARIDNKVTISFINGS 219
           E+LC++  G+FK AE+NYH NEKE  A+K  I K +    +  F+ R DNK    F+  S
Sbjct: 595 ERLCRYTSGSFKPAEINYHSNEKEVLAVKRTITKFKGYLASSEFLVRTDNKYFTYFLRTS 654

Query: 218 IKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDFA 90
           IKD   + RLIR Q WFS + F +EH+ GT N  A+ L R+FA
Sbjct: 655 IKDDYKQGRLIRWQQWFSHYKFNVEHLAGTHNFTADSLTREFA 697



 Score = 50.1 bits (118), Expect(3) = 1e-69
 Identities = 21/58 (36%), Positives = 37/58 (63%)
 Frame = -1

Query: 585 KKRLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +++LKK+ ++ W + D + ++K K+ ++ FPKL  P  ++   IETDAS   W  VL+
Sbjct: 530 QRKLKKDTVWEWNDSDTQYVEKFKRNLKEFPKLHHPLPDEYLIIETDASHEHWAGVLK 587


>gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 673

 Score =  166 bits (420), Expect(3) = 6e-69
 Identities = 84/177 (47%), Positives = 111/177 (62%), Gaps = 1/177 (0%)
 Frame = -3

Query: 1093 FSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMDNIFKKYS 914
            FS F CKSGFWQ  ++QES++LTAF+ PQGH+ W V+ FGL+ AP IFQ  M N  +   
Sbjct: 331  FSSFDCKSGFWQVFLDQESQKLTAFTCPQGHFQWRVVPFGLKQAPSIFQRHMQNALRGLE 390

Query: 913  SFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGLEID*G 734
             F LVYVDDI+++S    EH  H+       +  GI+LS KK+   + KI+FLGLEID G
Sbjct: 391  EFCLVYVDDIIVFSDKEEEHYTHVLKVLKRIESLGIILSKKKTNLFKEKINFLGLEIDRG 450

Query: 733  RILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKKKAQEE 566
                Q H +  +    D++ED KQLQR LG L YA  +I  LA+ R PLQ K  +++
Sbjct: 451  THTPQNHILEHLHNFPDRLEDKKQLQRFLGVLTYADSYIPKLAEKRKPLQVKLKKDQ 507



 Score = 87.0 bits (214), Expect(3) = 6e-69
 Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
 Frame = -2

Query: 401 GNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTK-PFVARIDN-KVTISFI 228
           GNE +C+++ GTFK AE+NYH NEKE  A+K  I K  I  T   F  R DN  +   F+
Sbjct: 563 GNELICRYSSGTFKPAELNYHSNEKELLAVKQVITKFSIYLTPVTFTVRTDNVNLLKRFM 622

Query: 227 NGSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDF 93
           N  I     + RLIR Q W S + F + H+ G KNVLA+ L R++
Sbjct: 623 NTKITGDSKQGRLIRWQMWLSHYTFNVNHLKGEKNVLADYLTREY 667



 Score = 60.8 bits (146), Expect(3) = 6e-69
 Identities = 28/56 (50%), Positives = 39/56 (69%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK+ ++ W   D + +KKIKK + +FPKL LP+ ED   IETDAS+  WG VL+
Sbjct: 502 KLKKDQVWIWNQSDTDYVKKIKKGLVNFPKLYLPKKEDSLIIETDASDHFWGGVLK 557


>gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]
          Length = 673

 Score =  166 bits (420), Expect(3) = 6e-69
 Identities = 84/177 (47%), Positives = 111/177 (62%), Gaps = 1/177 (0%)
 Frame = -3

Query: 1093 FSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMDNIFKKYS 914
            FS F CKSGFWQ  ++QES++LTAF+ PQGH+ W V+ FGL+ AP IFQ  M N  +   
Sbjct: 331  FSSFDCKSGFWQVFLDQESQKLTAFTCPQGHFQWRVVPFGLKQAPSIFQRHMQNALRGLE 390

Query: 913  SFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGLEID*G 734
             F LVYVDDI+++S    EH  H+       +  GI+LS KK+   + KI+FLGLEID G
Sbjct: 391  EFCLVYVDDIIVFSDKEEEHYTHVLKVLKRIESLGIILSEKKANLFKEKINFLGLEIDRG 450

Query: 733  RILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKKKAQEE 566
                Q H +  +    D++ED KQLQR LG L YA  +I  LA+ R PLQ K  +++
Sbjct: 451  THTPQNHILEHLHNFPDRLEDKKQLQRFLGVLTYADSYIPKLAEKRKPLQVKLKKDQ 507



 Score = 87.0 bits (214), Expect(3) = 6e-69
 Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
 Frame = -2

Query: 401 GNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTK-PFVARIDN-KVTISFI 228
           GNE +C+++ GTFK AE+NYH NEKE  A+K  I K  I  T   F  R DN  +   F+
Sbjct: 563 GNELICRYSSGTFKPAELNYHSNEKELLAVKQVITKFSIYLTPVTFTVRTDNVNLLKRFM 622

Query: 227 NGSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDF 93
           N  I     + RLIR Q W S + F + H+ G KNVLA+ L R++
Sbjct: 623 NTKITGDSKQGRLIRWQMWLSHYTFNVNHLKGEKNVLADYLTREY 667



 Score = 60.8 bits (146), Expect(3) = 6e-69
 Identities = 28/56 (50%), Positives = 39/56 (69%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK+ ++ W   D + +KKIKK + +FPKL LP+ ED   IETDAS+  WG VL+
Sbjct: 502 KLKKDQVWIWNQSDTDYVKKIKKGLVNFPKLYLPKKEDSLIIETDASDHFWGGVLK 557


>dbj|BAS06276.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 672

 Score =  166 bits (420), Expect(3) = 7e-69
 Identities = 84/177 (47%), Positives = 111/177 (62%), Gaps = 1/177 (0%)
 Frame = -3

Query: 1093 FSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMDNIFKKYS 914
            FS F CKSGFWQ  ++QES++LTAF+ PQGH+ W V+ FGL+ AP IFQ  M N  +   
Sbjct: 330  FSSFDCKSGFWQVFLDQESQKLTAFTCPQGHFQWRVVPFGLKQAPSIFQRHMQNALRGLE 389

Query: 913  SFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGLEID*G 734
             F LVYVDDI+++S    EH  H+       +  GI+LS KK+   + KI+FLGLEID G
Sbjct: 390  EFCLVYVDDIIVFSDKEEEHYTHVLKVLKRIESLGIILSKKKANLFKEKINFLGLEIDRG 449

Query: 733  RILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKKKAQEE 566
                Q H +  +    D++ED KQLQR LG L YA  +I  LA+ R PLQ K  +++
Sbjct: 450  THTPQNHILEHLHNFPDRLEDKKQLQRFLGVLTYADSYIPKLAEKRKPLQVKLKKDQ 506



 Score = 86.7 bits (213), Expect(3) = 7e-69
 Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
 Frame = -2

Query: 401 GNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTK-PFVARIDN-KVTISFI 228
           GNE +C+++ GTFK AE+NYH NEKE  A+K  I K  I  T   F  R DN  +   F+
Sbjct: 562 GNELICRYSSGTFKPAELNYHSNEKELLAVKQVITKFSIYLTPVTFTVRTDNVNLLKRFM 621

Query: 227 NGSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDF 93
           N  I     + RL+R Q W S + F + H+ G KNVLA+ L R++
Sbjct: 622 NTKITGDSKQGRLVRWQMWLSHYTFNVNHLKGEKNVLADYLTREY 666



 Score = 60.8 bits (146), Expect(3) = 7e-69
 Identities = 28/56 (50%), Positives = 39/56 (69%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK+ ++ W   D + +KKIKK + +FPKL LP+ ED   IETDAS+  WG VL+
Sbjct: 501 KLKKDQVWIWNQSDTDYVKKIKKGLVNFPKLYLPKKEDSLIIETDASDHFWGGVLK 556


>gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]
          Length = 810

 Score =  160 bits (406), Expect(3) = 8e-68
 Identities = 80/177 (45%), Positives = 112/177 (63%), Gaps = 1/177 (0%)
 Frame = -3

Query: 1108 RRQKWFSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMDNI 929
            R + +FS F CK+GFWQ  +++ES+ LTAF+ P GHY W V+ FGL+ AP IFQ  M N 
Sbjct: 469  RGKIYFSSFDCKNGFWQVLLDEESQLLTAFTCPDGHYQWKVVPFGLKQAPSIFQRHMQNA 528

Query: 928  FKKYSSFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGL 749
             +   ++  VYVDDI+++S +  +H  H+       +K+GI+LS KK+   + KI+FLG 
Sbjct: 529  LRGLENYCTVYVDDIIVFSDSEEKHYFHVLSVLKTIEKYGIILSKKKTNLFKTKINFLGF 588

Query: 748  EID*GRILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKK 581
            EID G    Q+H +  +    D +ED K LQR LG L YA+ +I  LA+LR PLQ K
Sbjct: 589  EIDQGTHCPQKHILENLHKFPDTLEDKKHLQRFLGILTYAESYIPKLAELRRPLQVK 645



 Score = 94.0 bits (232), Expect(3) = 8e-68
 Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
 Frame = -2

Query: 413  SKRLGNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTK-PFVARIDNKVTI 237
            +K    E++C++  G+FK AE NYH NEKE  A+KNAI K  I  T   F+ R D+K   
Sbjct: 701  AKTAEKEEVCRYTSGSFKTAEKNYHSNEKELLAVKNAISKFSIYLTPVKFLVRTDSKNFT 760

Query: 236  SFINGSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDF 93
             F+   I     + RL+R Q WFS + F IEH+ G KNVLA+ L RDF
Sbjct: 761  YFLKTKISGDNKQGRLVRWQMWFSRYTFDIEHLEGLKNVLADCLTRDF 808



 Score = 55.5 bits (132), Expect(3) = 8e-68
 Identities = 26/56 (46%), Positives = 36/56 (64%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK+ ++ W   D   +KKIKK +  FPKL LP+ ++   IETDAS   WG VL+
Sbjct: 645 KLKKDYVWEWKQSDTSYIKKIKKNLTSFPKLYLPKEKEFLIIETDASNDYWGGVLK 700


>gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]
          Length = 825

 Score =  159 bits (403), Expect(3) = 3e-67
 Identities = 80/172 (46%), Positives = 108/172 (62%), Gaps = 1/172 (0%)
 Frame = -3

Query: 1093 FSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMDNIFKKYS 914
            FS F CKSGFWQ  + +ES+ LTAF+ P GHY W V+ FGL+  P IFQ  M N  +   
Sbjct: 485  FSTFDCKSGFWQVLLNEESQLLTAFTCPDGHYQWKVVPFGLKQTPSIFQRHMQNALRGLE 544

Query: 913  SFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGLEID*G 734
            ++  VYVDDI+++S +  +H  H+       +K+GI+LS KK+   + KI+FLGLEID G
Sbjct: 545  NYCTVYVDDIIVFSDSEEKHYFHVLSVLKTIEKYGIILSKKKANLFKTKINFLGLEIDQG 604

Query: 733  RILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKK 581
                Q+H +  +    D +ED K LQR LG L YA+ +I  LA+LR PLQ K
Sbjct: 605  THCPQKHILENLHKFPDTLEDKKHLQRFLGVLTYAESYIPKLAELRRPLQVK 656



 Score = 93.2 bits (230), Expect(3) = 3e-67
 Identities = 50/111 (45%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
 Frame = -2

Query: 410  KRLGNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTK-PFVARIDNKVTIS 234
            K    E++CK+  G+FK AE NYH NEKE  A+KN I K  I      F+ R DN+    
Sbjct: 713  KTAETEEICKYTSGSFKTAEKNYHSNEKELLAVKNTISKFSIYLIPVKFLVRTDNRNFTY 772

Query: 233  FINGSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDFAGMS 81
            F+   I     + RL+R Q WFS + F IEH+ G KNVLA+ L RDF   S
Sbjct: 773  FLKTKISGDNKQGRLVRWQMWFSRYSFDIEHLEGPKNVLADFLTRDFQSNS 823



 Score = 55.5 bits (132), Expect(3) = 3e-67
 Identities = 27/56 (48%), Positives = 34/56 (60%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK+ ++ W   D   +KKIKK +  FPKL LP  ED   IET AS   WG VL+
Sbjct: 656 KLKKDFVWEWKQSDTNYVKKIKKNLTSFPKLYLPNKEDFLIIETGASNEFWGGVLK 711


>gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]
          Length = 806

 Score =  159 bits (403), Expect(3) = 9e-67
 Identities = 80/177 (45%), Positives = 112/177 (63%), Gaps = 1/177 (0%)
 Frame = -3

Query: 1108 RRQKWFSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMDNI 929
            R + +FS F CKSGFWQ  +++ES+ LTAF+ P GHY W V+ FGL+ AP IFQ  M N 
Sbjct: 465  RGKTYFSSFDCKSGFWQVLLDEESQLLTAFTCPNGHYQWKVVPFGLKQAPSIFQRHMQNA 524

Query: 928  FKKYSSFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGL 749
             +   ++  VYVD I+++S +  ++  H+       +K+GI+LS KK+   + KI+FLGL
Sbjct: 525  LRGLENYCTVYVDGIIVFSDSEEKYYFHVLSILKTIEKYGIILSKKKANLFKTKINFLGL 584

Query: 748  EID*GRILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKK 581
            EID G    Q+H +  +    D +ED K LQR LG L YA+ +I  LA+LR PLQ K
Sbjct: 585  EIDQGTHCPQKHILENLHKFPDTLEDKKHLQRFLGVLTYAESYIPKLAELRRPLQVK 641



 Score = 92.4 bits (228), Expect(3) = 9e-67
 Identities = 49/108 (45%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
 Frame = -2

Query: 413  SKRLGNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTK-PFVARIDNKVTI 237
            +K    E +C++  G+FK AE NYH NEK+  A+KN I K  I  T   F+ R DN+   
Sbjct: 697  AKTADKEAVCRYTSGSFKTAEKNYHSNEKKLLAVKNTISKFSIYLTPVKFLVRTDNRNFT 756

Query: 236  SFINGSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDF 93
             F+   I     + RLIR Q WFS + F IEH+ G+KNVLA+ L RDF
Sbjct: 757  YFLKTKISGDNKQGRLIRWQMWFSRYSFDIEHLEGSKNVLADCLTRDF 804



 Score = 54.7 bits (130), Expect(3) = 9e-67
 Identities = 26/56 (46%), Positives = 36/56 (64%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK+ ++ W   D   +KKIKK +  FPKL LP+ ++   IETDAS   WG VL+
Sbjct: 641 KLKKDYVWEWKQSDTNYIKKIKKNLTSFPKLYLPKEKEFPIIETDASNDFWGGVLK 696


>gb|AQS27979.1| putative reverse transcriptase [Strawberry vein banding virus]
          Length = 745

 Score =  157 bits (398), Expect(3) = 5e-64
 Identities = 82/178 (46%), Positives = 109/178 (61%), Gaps = 2/178 (1%)
 Frame = -3

Query: 1096 WFSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMD-NIFKK 920
            ++S F CKSGFWQ ++  E+ +LTAFS PQGHY W VM FGL+ AP IFQ  MD ++   
Sbjct: 404  YYSSFDCKSGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFGLKQAPAIFQRHMDESLSNM 463

Query: 919  YSSFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGLEID 740
            Y SF  VYVDDI+++S    EH+ H+ +     K  GIVLS KK+   +  I+FLGL I+
Sbjct: 464  YPSFCAVYVDDIIVFSKTEDEHLGHVKIVLNRCKALGIVLSKKKAQLCKTTINFLGLVIE 523

Query: 739  *GRILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKKKAQE 569
             G + +Q H    + A  D++ D   LQR LG LNY   +   +A LR PLQ K  +E
Sbjct: 524  RGNLKIQSHIGLHLTAFPDQLADRNALQRFLGLLNYISAYFPKIANLRSPLQVKLKKE 581



 Score = 82.4 bits (202), Expect(3) = 5e-64
 Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
 Frame = -2

Query: 401 GNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTKP--FVARIDNKVTISFI 228
           G E +C++A GTFK AE NYH NEKE  +I  AI K+   +  P  F+ R DN     F+
Sbjct: 638 GKEVICRYASGTFKPAEKNYHSNEKEILSIIKAI-KAFRAYILPYKFLVRTDNTNAAYFV 696

Query: 227 NGSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDFAG 87
             +I     + RL+R Q     + F IEH++G KNVLA+++ R+FAG
Sbjct: 697 RTNIAGDYKQSRLVRWQMALREYSFDIEHVSGQKNVLADIMTREFAG 743



 Score = 57.4 bits (137), Expect(3) = 5e-64
 Identities = 28/56 (50%), Positives = 37/56 (66%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK  I+SWT +D E ++KIK +V+  P L  P  ED   IE DAS+  WGAVL+
Sbjct: 577 KLKKEIIWSWTEKDTETVRKIKSLVKSLPDLYNPSPEDKPIIECDASDDHWGAVLK 632


>gb|ALF37644.1| putative reverse transcriptase [Strawberry vein banding virus]
          Length = 704

 Score =  157 bits (397), Expect(3) = 2e-63
 Identities = 82/178 (46%), Positives = 109/178 (61%), Gaps = 2/178 (1%)
 Frame = -3

Query: 1096 WFSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMD-NIFKK 920
            ++S F CKSGFWQ ++  E+ +LTAFS PQGHY W VM FGL+ AP IFQ  MD ++   
Sbjct: 363  YYSSFDCKSGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFGLKQAPAIFQRHMDESLSNM 422

Query: 919  YSSFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGLEID 740
            Y SF  VYVDDI+++S    EH+ H+ +     K  GIVLS KK+   +  I+FLGL I+
Sbjct: 423  YPSFCAVYVDDIIVFSKTEDEHLGHVKIVLNRCKALGIVLSKKKAQLCKTTINFLGLVIE 482

Query: 739  *GRILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKKKAQE 569
             G + +Q H    + A  D++ D   LQR LG LNY   +   +A LR PLQ K  +E
Sbjct: 483  RGNLKVQSHIGLHLTAFPDQLADRNALQRFLGLLNYISAYFPKIANLRSPLQVKLKKE 540



 Score = 82.4 bits (202), Expect(3) = 2e-63
 Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
 Frame = -2

Query: 401 GNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTKP--FVARIDNKVTISFI 228
           G E +C++A GTFK AE NYH NEKE  +I  AI K+   +  P  F+ R DN     F+
Sbjct: 597 GKEVICRYASGTFKPAEKNYHSNEKEILSIIKAI-KAFRAYILPYKFLVRTDNTNAAYFV 655

Query: 227 NGSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDFAG 87
             +I     + RL+R Q     + F IEH++G KNVLA+++ R+FAG
Sbjct: 656 RTNIAGDYKQSRLVRWQMALREYSFDIEHVSGQKNVLADIMTREFAG 702



 Score = 55.5 bits (132), Expect(3) = 2e-63
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK   +SWT +D E ++KIK +V+  P L  P  ED   IE DAS+  WGAVL+
Sbjct: 536 KLKKEITWSWTEKDTETVRKIKSLVKSLPDLYNPSPEDKPIIECDASDDHWGAVLK 591


>emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
          Length = 699

 Score =  157 bits (397), Expect(3) = 2e-63
 Identities = 82/178 (46%), Positives = 109/178 (61%), Gaps = 2/178 (1%)
 Frame = -3

Query: 1096 WFSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMD-NIFKK 920
            ++S F CKSGFWQ ++  E+ +LTAFS PQGHY W VM FGL+ AP IFQ  MD ++   
Sbjct: 358  YYSSFDCKSGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFGLKQAPAIFQRHMDESLSNM 417

Query: 919  YSSFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGLEID 740
            Y SF  VYVDDI+++S    EH+ H+ +     K  GIVLS KK+   +  I+FLGL I+
Sbjct: 418  YPSFCAVYVDDIIVFSKTEDEHLGHVKIVLNRCKALGIVLSKKKAQLCKTTINFLGLVIE 477

Query: 739  *GRILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKKKAQE 569
             G + +Q H    + A  D++ D   LQR LG LNY   +   +A LR PLQ K  +E
Sbjct: 478  RGNLKVQSHIGLHLTAFPDQLADRNALQRFLGLLNYISAYFPKIANLRSPLQVKLKKE 535



 Score = 82.4 bits (202), Expect(3) = 2e-63
 Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
 Frame = -2

Query: 401 GNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTKP--FVARIDNKVTISFI 228
           G E +C++A GTFK AE NYH NEKE  +I  AI K+   +  P  F+ R DN     F+
Sbjct: 592 GKEVICRYASGTFKPAEKNYHSNEKEILSIIKAI-KAFRAYILPYKFLVRTDNTNAAYFV 650

Query: 227 NGSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDFAG 87
             +I     + RL+R Q     + F IEH++G KNVLA+++ R+FAG
Sbjct: 651 RTNIAGDYKQSRLVRWQMALREYSFDIEHVSGQKNVLADIMTREFAG 697



 Score = 55.5 bits (132), Expect(3) = 2e-63
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK   +SWT +D E ++KIK +V+  P L  P  ED   IE DAS+  WGAVL+
Sbjct: 531 KLKKEITWSWTEKDTETVRKIKSLVKSLPDLYNPSPEDKPIIECDASDDHWGAVLK 586


>gb|AKB94071.1| ORF V protein [Strawberry vein banding virus]
          Length = 704

 Score =  157 bits (397), Expect(3) = 3e-63
 Identities = 82/178 (46%), Positives = 109/178 (61%), Gaps = 2/178 (1%)
 Frame = -3

Query: 1096 WFSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMD-NIFKK 920
            ++S F CKSGFWQ ++  E+ +LTAFS PQGHY W VM FGL+ AP IFQ  MD ++   
Sbjct: 363  YYSSFDCKSGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFGLKQAPAIFQRHMDESLSNM 422

Query: 919  YSSFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGLEID 740
            Y SF  VYVDDI+++S    EH+ H+ +     K  GIVLS KK+   +  I+FLGL I+
Sbjct: 423  YPSFCAVYVDDIIVFSKTEDEHLGHVRIVLNRCKALGIVLSKKKAQLCKTTINFLGLVIE 482

Query: 739  *GRILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKKKAQE 569
             G + +Q H    + A  D++ D   LQR LG LNY   +   +A LR PLQ K  +E
Sbjct: 483  RGNLKVQSHIGLHLTAFPDQLADRNALQRFLGLLNYISAYFPKIANLRSPLQVKLKKE 540



 Score = 82.4 bits (202), Expect(3) = 3e-63
 Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
 Frame = -2

Query: 401 GNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTKP--FVARIDNKVTISFI 228
           G E +C++A GTFK AE NYH NEKE  +I  AI K+   +  P  F+ R DN     F+
Sbjct: 597 GKEVICRYASGTFKPAEKNYHSNEKEILSIIKAI-KAFRAYILPYKFLVRTDNTNAAYFV 655

Query: 227 NGSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDFAG 87
             +I     + RL+R Q     + F IEH++G KNVLA+++ R+FAG
Sbjct: 656 RTNIAGDYKQSRLVRWQMALREYSFDIEHVSGQKNVLADIMTREFAG 702



 Score = 55.1 bits (131), Expect(3) = 3e-63
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK   +SWT +D E ++KIK +V+  P L  P  ED   IE DAS+  WGAVL+
Sbjct: 536 KLKKEITWSWTEKDTETVRKIKSLVKSLPDLYNPSPEDRPIIECDASDDHWGAVLK 591


>gb|ARO77050.1| ORFV protein [Strawberry vein banding virus]
          Length = 704

 Score =  157 bits (397), Expect(3) = 4e-63
 Identities = 82/178 (46%), Positives = 109/178 (61%), Gaps = 2/178 (1%)
 Frame = -3

Query: 1096 WFSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMD-NIFKK 920
            ++S F CKSGFWQ ++  E+ +LTAFS PQGHY W VM FGL+ AP IFQ  MD ++   
Sbjct: 363  YYSSFDCKSGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFGLKQAPAIFQRHMDESLSNM 422

Query: 919  YSSFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGLEID 740
            Y SF  VYVDDI+++S    EH+ H+ +     K  GIVLS KK+   +  I+FLGL I+
Sbjct: 423  YPSFCAVYVDDIIVFSKTEDEHLGHVRIVLNRCKALGIVLSKKKAQLCKTTINFLGLVIE 482

Query: 739  *GRILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKKKAQE 569
             G + +Q H    + A  D++ D   LQR LG LNY   +   +A LR PLQ K  +E
Sbjct: 483  RGNLKVQSHIGLHLTAFPDQLADRNALQRFLGLLNYISAYFPKIANLRSPLQVKLKKE 540



 Score = 82.4 bits (202), Expect(3) = 4e-63
 Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
 Frame = -2

Query: 401 GNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTKP--FVARIDNKVTISFI 228
           G E +C++A GTFK AE NYH NEKE  +I  AI K+   +  P  F+ R DN     F+
Sbjct: 597 GKEVICRYASGTFKPAEKNYHSNEKEILSIIKAI-KAFRAYILPYKFLVRTDNTNAAYFV 655

Query: 227 NGSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDFAG 87
             +I     + RL+R Q     + F IEH++G KNVLA+++ R+FAG
Sbjct: 656 RTNIAGDYKQSRLVRWQMALREYSFDIEHVSGQKNVLADIMTREFAG 702



 Score = 54.7 bits (130), Expect(3) = 4e-63
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK   +SWT +D E ++KIK +V+  P L  P  ED   IE DAS+  WGAVL+
Sbjct: 536 KLKKEITWSWTEKDTETVRKIKSLVKTLPDLYNPSPEDRPIIECDASDDHWGAVLK 591


>ref|YP_001931967.1| replicase [Eupatorium vein clearing virus]
 gb|ACB69773.1| replicase [Eupatorium vein clearing virus]
          Length = 674

 Score =  146 bits (368), Expect(3) = 2e-62
 Identities = 74/172 (43%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
 Frame = -3

Query: 1093 FSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMDNIFKKYS 914
            FS F CKSGFWQ  +++ S+ELTAF+ PQGHY W VM FGL+ AP IFQ  M     ++S
Sbjct: 332  FSSFDCKSGFWQVLLDKPSQELTAFTCPQGHYQWLVMPFGLKQAPAIFQRHMQIALNEHS 391

Query: 913  SFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGLEID*G 734
            ++S VY+DDIL++S N  +H  H+          GI+LS KKS   +  IDFLG+ ID G
Sbjct: 392  AYSCVYIDDILVFSENEKDHEIHVSKVLNRCINLGIILSKKKSQLFKETIDFLGISIDKG 451

Query: 733  RILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKK 581
                + H +  I    ++ +D  Q ++ LG + YA  +I  L++ R+ LQ K
Sbjct: 452  THSPKPHILENIHNFPERFKDVNQCRKFLGIITYAMRYIPELSRKRMFLQDK 503



 Score = 85.5 bits (210), Expect(3) = 2e-62
 Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
 Frame = -2

Query: 395 EQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTK-PFVARIDNKVTISFINGS 219
           E++C +A GTFK+AE+NYH NEKE  A+  +I+   +  T   F+ R DNK    F+   
Sbjct: 570 EEICCYASGTFKQAELNYHSNEKEILAVIRSIQSFPVYLTPVEFIVRTDNKTMEHFLTSK 629

Query: 218 IKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDF 93
            +      RL+R Q WF  ++F +EHI GT N LA+ L R++
Sbjct: 630 FELGTKSGRLVRWQMWFKHYNFKVEHIKGTSNFLADYLSREY 671



 Score = 60.5 bits (145), Expect(3) = 2e-62
 Identities = 26/56 (46%), Positives = 39/56 (69%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKKN  ++WT+ED  LL+K+K  ++ FPKL +PQ      +ETDAS+  WG +L+
Sbjct: 503 KLKKNVPWTWTSEDTRLLQKLKLSLKEFPKLHIPQPGQQLILETDASQKYWGGILK 558


>ref|NP_043933.1| hypothetical protein [Strawberry vein banding virus]
 emb|CAA65970.1| ORF V [Strawberry vein banding virus]
          Length = 708

 Score =  155 bits (392), Expect(3) = 7e-62
 Identities = 81/178 (45%), Positives = 108/178 (60%), Gaps = 2/178 (1%)
 Frame = -3

Query: 1096 WFSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMD-NIFKK 920
            ++S F CKSGFWQ ++  E+ +LTAFS PQGHY W VM FGL+ AP IFQ  MD ++   
Sbjct: 367  FYSSFDCKSGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFGLKQAPAIFQRHMDESLSNM 426

Query: 919  YSSFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGLEID 740
            Y  F  VYVDDI+++S    EH+ H+ +     K  GIVLS KK+   +  I+FLGL I+
Sbjct: 427  YPQFCAVYVDDIIVFSKTEEEHLGHVKIVLNRCKALGIVLSKKKAQLCKTTINFLGLVIE 486

Query: 739  *GRILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKKKAQE 569
             G + +Q H    + A  D++ D   LQR LG LNY   +   +A LR PLQ K  +E
Sbjct: 487  RGNLKVQSHIGLHLVAFPDQLSDRNALQRFLGLLNYISAYFPKIANLRSPLQVKLKKE 544



 Score = 80.1 bits (196), Expect(3) = 7e-62
 Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
 Frame = -2

Query: 401 GNEQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTKP--FVARIDNKVTISFI 228
           G E +C++A GTFK AE NYH NEKE  +I  AI K+   +  P  F+ R DN     F+
Sbjct: 601 GKEVICRYASGTFKPAEKNYHSNEKEILSIIKAI-KAFRAYILPYKFLVRTDNTNAAYFV 659

Query: 227 NGSIKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDFAG 87
             +I     + RL+R Q     + F IEH++G KNVLA+++ R+ AG
Sbjct: 660 RTNIAGDYKQSRLVRWQMALREYSFDIEHVSGQKNVLADIMTRELAG 706



 Score = 54.7 bits (130), Expect(3) = 7e-62
 Identities = 26/56 (46%), Positives = 36/56 (64%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK   +SWT +D E ++KIK +V+  P L  P  ED   IE DAS+  WGA+L+
Sbjct: 540 KLKKEITWSWTEKDTETVRKIKSLVKTLPDLYNPSPEDKPIIECDASDDHWGAILK 595


>ref|YP_007761644.1| reverse transcriptase [Rose yellow vein virus]
 gb|AFO54491.1| reverse transcriptase [Rose yellow vein virus]
          Length = 819

 Score =  170 bits (431), Expect(3) = 5e-59
 Identities = 87/182 (47%), Positives = 120/182 (65%), Gaps = 2/182 (1%)
 Frame = -3

Query: 1120 YSANRRQKWFSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTR 941
            + A R  +++SKF CKSGF+Q  MEQ+S +LTAFS+P G Y W VM FGL  AP IFQ +
Sbjct: 466  FLAIRESQFYSKFDCKSGFYQVPMEQDSIQLTAFSTPIGSYEWLVMPFGLATAPSIFQAK 525

Query: 940  MDNIFKKYSSFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKID 761
            MDN+ + +  + LVY+DDI+++S  + EH  H+   A   KK+GIV+S KK      KI+
Sbjct: 526  MDNVLEDHHDYCLVYIDDIIVFSRTLEEHKIHVITIAKTLKKNGIVISKKKMELGLTKIN 585

Query: 760  FLGLEID*GRILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKG-FIKNLAQLRVPLQ 587
            FLG EI+ GRI+LQ H +  +     +I+D K+LQ  LG +NYA   +   + +LRVPLQ
Sbjct: 586  FLGCEIENGRIILQNHVLENLSKFPSEIKDKKELQSFLGIINYAASHYSIEVTKLRVPLQ 645

Query: 586  KK 581
            KK
Sbjct: 646  KK 647



 Score = 56.6 bits (135), Expect(3) = 5e-59
 Identities = 24/58 (41%), Positives = 40/58 (68%)
 Frame = -1

Query: 585 KKRLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +K+LKKN I+SWT +D +++++IK + ++ P L LP+  D   + TDAS+  W  VL+
Sbjct: 645 QKKLKKNYIWSWTEQDKQIVEQIKTICQNLPALELPKNGDKLVLTTDASDKHWAGVLQ 702



 Score = 53.5 bits (127), Expect(3) = 5e-59
 Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
 Frame = -2

Query: 392  QLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSEICFTKPFVARIDNKVTISFINGSIK 213
            ++ ++  GT+ + E N+    KE  AIK A++K ++   +PF    DN   I+F+   + 
Sbjct: 717  RVSRYCSGTWNQTEQNWSTFGKELRAIKLALQKFKLFLFEPFTLYSDNLAVINFLKKDLN 776

Query: 212  DSLPKKR------LIR*QSWFSAFDFTIEHINGTKNVLANLLIRDFAGMSN 78
            +   ++       +++ Q W      T++HI GTKNVLA+ L R   G+SN
Sbjct: 777  EKRSQREIRDKLDILQYQGW-----MTLKHIPGTKNVLADALTR---GLSN 819


>tpd|FAA01216.1| TPA: polyprotein [Sorghum bicolor]
          Length = 1360

 Score =  156 bits (395), Expect(3) = 2e-51
 Identities = 78/172 (45%), Positives = 113/172 (65%), Gaps = 1/172 (0%)
 Frame = -3

Query: 1093 FSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMDNIFKKYS 914
            +SKF  KSGFWQ ++++E +  TAF++P GHY WNVM FGL+NAP  FQ  M+ IF  Y+
Sbjct: 1011 YSKFDMKSGFWQIQIKEEDRYKTAFTTPFGHYEWNVMPFGLKNAPSEFQKIMNEIFLPYT 1070

Query: 913  SFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGLEID*G 734
            SF +VY+DD+LI+S NI +H KH+ +F     ++G+V+S++K    Q  I FLG +I   
Sbjct: 1071 SFIIVYIDDVLIFSQNIDQHWKHLNIFHKIIIQNGLVVSARKMKLFQTNIQFLGYKIQHD 1130

Query: 733  RILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKK 581
            ++L     I   +   D+I++ KQLQR LGCLNY   F + LA+ R  L ++
Sbjct: 1131 QVLPVTRVIEFADKFPDEIKEKKQLQRFLGCLNYVSDFYERLAKDRKILTER 1182



 Score = 60.1 bits (144), Expect(3) = 2e-51
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
 Frame = -2

Query: 395  EQLCKFA*GTFKKAEVNYHINEKEF*AIKNAIEKSE-ICFTKPFVARIDNKVTISFINGS 219
            EQL +FA GT+  A+ NY   +KE  AI   + K +     + F+ RID K     +   
Sbjct: 1243 EQLVRFASGTWNDAQRNYSTIKKEILAIVKVVSKFQGELLNQKFLLRIDCKAAKDVLQKD 1302

Query: 218  IKDSLPKKRLIR*QSWFSAFDFTIEHINGTKNVLANLLIRDF 93
            +++ + K+   R Q+  S FDF IEHI G  N L + L R+F
Sbjct: 1303 VENLVSKQIFARWQAILSCFDFDIEHIKGEVNSLPDFLSREF 1344



 Score = 38.5 bits (88), Expect(3) = 2e-51
 Identities = 21/57 (36%), Positives = 33/57 (57%)
 Frame = -1

Query: 582  KRLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
            +RLKKN   +WT    + +K+IK  V+  P L +   +    IETDAS+  +G +L+
Sbjct: 1181 ERLKKNPP-AWTTRHTQAVKQIKDKVKRLPCLYILDHDAFKIIETDASDFGYGGILK 1236


>ref|YP_006732334.1| polyprotein [Dahlia mosaic virus]
 gb|AAP75615.1| polyprotein [Dahlia mosaic virus]
 gb|AFR69283.1| polyprotein [Dahlia mosaic virus]
          Length = 609

 Score =  167 bits (422), Expect(3) = 2e-51
 Identities = 84/182 (46%), Positives = 114/182 (62%), Gaps = 1/182 (0%)
 Frame = -3

Query: 1108 RRQKWFSKFGCKSGFWQFKMEQESKELTAFSSPQGHYHWNVMSFGLENAPQIFQTRMDNI 929
            R +  FS F CKSGFWQ  ++QES++LTAF+ PQGH+ W V+ FGL+ AP IFQ  M N 
Sbjct: 346  RGKSIFSSFDCKSGFWQVFLDQESQKLTAFTCPQGHFQWRVVPFGLKQAPSIFQRHMQNA 405

Query: 928  FKKYSSFSLVYVDDILIYSANITEHVKHIGLFALEAKKHGIVLSSKKSVFLQNKIDFLGL 749
             +    + LVYVDDI+++S +  EH  H+       +  GI+LS KK+   + KI+FLGL
Sbjct: 406  LRGLEDYCLVYVDDIIVFSNSEKEHYDHVLSVLRRVESLGIILSEKKANLFKEKINFLGL 465

Query: 748  EID*GRILLQEHTITKIEAI-DKIEDTKQLQRLLGCLNYAKGFIKNLAQLRVPLQKKKAQ 572
            EID G    Q H +  +    D++ED KQLQR LG L YA  +I  LA+ R PLQ K  +
Sbjct: 466  EIDRGTHTPQNHILEHLHGFPDRLEDKKQLQRFLGVLTYADSYIPKLAEKRKPLQVKLKK 525

Query: 571  EE 566
            ++
Sbjct: 526  DQ 527



 Score = 63.5 bits (153), Expect(3) = 2e-51
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = -1

Query: 579 RLKKNAIFSWTNEDNELLKKIKKMVRHFPKLTLPQFEDDCTIETDASELTWGAVLE 412
           +LKK+ ++SW+  D + +KKIKK + +FPKL LP+ ED   IETDAS+  WG VL+
Sbjct: 522 KLKKDQVWSWSQSDTDYIKKIKKGLINFPKLYLPKPEDSLIIETDASDNFWGGVLK 577



 Score = 24.3 bits (51), Expect(3) = 2e-51
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -3

Query: 376 LKEHLRKLKSITILMKKN 323
           ++EH  + K ITI+MKKN
Sbjct: 591 VQEHSNQQKPITIVMKKN 608