BLASTX nr result

ID: Cheilocostus21_contig00000392 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00000392
         (436 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009414531.1| PREDICTED: RPM1-interacting protein 4 [Musa ...    65   5e-11
ref|XP_009408263.1| PREDICTED: RPM1-interacting protein 4-like [...    55   2e-07
ref|XP_009417934.1| PREDICTED: RPM1-interacting protein 4-like [...    55   2e-07

>ref|XP_009414531.1| PREDICTED: RPM1-interacting protein 4 [Musa acuminata subsp.
           malaccensis]
          Length = 76

 Score = 64.7 bits (156), Expect = 5e-11
 Identities = 28/37 (75%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
 Frame = +1

Query: 1   GGNSGAPATPTRKDSGS-QPDDSYQQPSKTRKWLCCG 108
           GGNSG P TPTRKD GS  PDD+YQ P KTRKW CCG
Sbjct: 40  GGNSGTPTTPTRKDVGSLPPDDTYQHPRKTRKWFCCG 76


>ref|XP_009408263.1| PREDICTED: RPM1-interacting protein 4-like [Musa acuminata subsp.
           malaccensis]
          Length = 76

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
 Frame = +1

Query: 1   GGNSGAPATPTRKDSGS-QPDDSYQQPSKTRKWLCCG 108
           G NSGA ATP R D+G  Q DD+YQ P K+RKW CCG
Sbjct: 40  GANSGATATPPRNDAGGFQQDDTYQHPRKSRKWFCCG 76


>ref|XP_009417934.1| PREDICTED: RPM1-interacting protein 4-like [Musa acuminata subsp.
           malaccensis]
          Length = 76

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 25/37 (67%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
 Frame = +1

Query: 1   GGNSGAP-ATPTRKDSGSQPDDSYQQPSKTRKWLCCG 108
           GGNSG P ATP R   G Q DD+YQ P K+RKWLCCG
Sbjct: 40  GGNSGTPTATPKRDVGGLQADDTYQYPRKSRKWLCCG 76


Top