BLASTX nr result

ID: Cephaelis21_contig00054405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054405
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat...   112   3e-23
ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat...   106   2e-21
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,...   102   4e-20
ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19

>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Vitis vinifera]
          Length = 1048

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/92 (60%), Positives = 70/92 (76%)
 Frame = -3

Query: 278 VYAVYDDMIEASDIPEQVVYGFMLKSFCIAGKIREALEFLRTLKDKSVSIVPEHFKSLVK 99
           V  V DDMI  S IPE+ V+  MLKSFCIAG+IREALE +R L DK++++ P  F++LVK
Sbjct: 329 VQLVADDMIRRSQIPERDVFSCMLKSFCIAGRIREALELIRDLNDKNLTLEPNDFETLVK 388

Query: 98  GLCRAGRIDDALEIVDIMKKKNSVDEEIYEIL 3
           GLCRA RI DA EIVDIMKK+  VD ++Y I+
Sbjct: 389 GLCRADRITDAAEIVDIMKKRKVVDAKVYGII 420


>ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Glycine max]
          Length = 1034

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/93 (54%), Positives = 72/93 (77%)
 Frame = -3

Query: 281 AVYAVYDDMIEASDIPEQVVYGFMLKSFCIAGKIREALEFLRTLKDKSVSIVPEHFKSLV 102
           AV  + +DMI  S +PE+ V+G MLKSFCI+G I EALE +R LK K + + PE++++LV
Sbjct: 313 AVSLLGNDMIRLSVMPEKCVHGCMLKSFCISGSIEEALELIRELKSKDLDLEPENYETLV 372

Query: 101 KGLCRAGRIDDALEIVDIMKKKNSVDEEIYEIL 3
           +GLC+AGRI DALEIVDIMK+++ VD  ++ I+
Sbjct: 373 RGLCKAGRITDALEIVDIMKRRDMVDGRVHGII 405


>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1072

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/93 (56%), Positives = 68/93 (73%)
 Frame = -3

Query: 281 AVYAVYDDMIEASDIPEQVVYGFMLKSFCIAGKIREALEFLRTLKDKSVSIVPEHFKSLV 102
           AV+ V +DM   S IPE  V   +LKSFC+AGKIREALE +R LK+K + I  E+  +LV
Sbjct: 333 AVHLVANDMSRLSQIPEHDVNVCILKSFCVAGKIREALELIRDLKNKDILIDYEYLGTLV 392

Query: 101 KGLCRAGRIDDALEIVDIMKKKNSVDEEIYEIL 3
           KGLCR  RI DA+EIV+IMKK+N +D +IY I+
Sbjct: 393 KGLCRGDRITDAVEIVEIMKKRNLIDAKIYGII 425


>ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|222854309|gb|EEE91856.1|
           predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/93 (55%), Positives = 70/93 (75%)
 Frame = -3

Query: 281 AVYAVYDDMIEASDIPEQVVYGFMLKSFCIAGKIREALEFLRTLKDKSVSIVPEHFKSLV 102
           AV +V DDMI  S IPE  V+  +LKS+C+AG+IREALE +R LK+K + +  E  ++LV
Sbjct: 327 AVQSVADDMIRVSQIPEHDVHVCVLKSYCVAGRIREALELIRDLKNKEIQLDYEVSETLV 386

Query: 101 KGLCRAGRIDDALEIVDIMKKKNSVDEEIYEIL 3
           KGL RA RI DALEIV+IMK+K+ VD ++Y I+
Sbjct: 387 KGLSRANRIADALEIVEIMKRKDFVDGKVYGII 419


>ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|222836989|gb|EEE75382.1|
           predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/93 (55%), Positives = 70/93 (75%)
 Frame = -3

Query: 281 AVYAVYDDMIEASDIPEQVVYGFMLKSFCIAGKIREALEFLRTLKDKSVSIVPEHFKSLV 102
           AV +V DDMI  S IPE  V+  +LKS+C+AG+IREALE +R LK+K + +  E  ++LV
Sbjct: 327 AVQSVADDMIRVSQIPEHDVHVCVLKSYCVAGRIREALELIRDLKNKEIQLDYEVSETLV 386

Query: 101 KGLCRAGRIDDALEIVDIMKKKNSVDEEIYEIL 3
           KGL RA RI DALEIV+IMK+K+ VD ++Y I+
Sbjct: 387 KGLSRANRIADALEIVEIMKRKDFVDGKVYGII 419


Top