BLASTX nr result

ID: Cephaelis21_contig00054374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054374
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98873.1| transposon protein, putative, unclassified [Oryza...   129   3e-28
gb|ABF99975.1| retrotransposon protein, putative, Ty3-gypsy subc...   129   3e-28
gb|AAS01973.1| retrotransposon protein, putative, Ty3-gypsy sub-...   129   3e-28
emb|CAE03595.1| OSJNBa0087O24.18 [Oryza sativa Japonica Group]        129   3e-28
gb|AAO66548.1| retrotransposon protein, putative, Ty3-gypsy sub-...   129   3e-28

>gb|ABA98873.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 864

 Score =  129 bits (323), Expect = 3e-28
 Identities = 57/97 (58%), Positives = 74/97 (76%)
 Frame = +3

Query: 6   IATHQLNIAPAVKPVKQKKRNFVEDRNQAINEEVDKLLRAGTLKEVFYPTWLSNPVMVKK 185
           +  H+L + P  KPVKQ+ R F  DR QAI EE+DKLL+AG ++EV +P WL+NPVMV+K
Sbjct: 8   VIEHKLMVQPDAKPVKQRLRRFAPDRKQAIREELDKLLKAGFIREVLHPEWLANPVMVRK 67

Query: 186 GDNTWRMCVDYTDLNKACPKDCYPLRVIEQKVDALIG 296
            +  WRMCVD+TDLNKACPKD +PL  I+Q VD+ +G
Sbjct: 68  ANGKWRMCVDFTDLNKACPKDHFPLPRIDQLVDSTVG 104


>gb|ABF99975.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1413

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/97 (60%), Positives = 73/97 (75%)
 Frame = +3

Query: 6    IATHQLNIAPAVKPVKQKKRNFVEDRNQAINEEVDKLLRAGTLKEVFYPTWLSNPVMVKK 185
            I  H+L + P  KPVKQ+ R F  DR QAI EE+DKLL+AG +KEV +P WL+NPVMV+K
Sbjct: 844  IIEHKLMVRPDAKPVKQRLRRFAPDRKQAIREELDKLLKAGFIKEVLHPEWLANPVMVRK 903

Query: 186  GDNTWRMCVDYTDLNKACPKDCYPLRVIEQKVDALIG 296
             +  WRMCVD+TDLNKACPKD +PL  I+Q VD+  G
Sbjct: 904  ANGKWRMCVDFTDLNKACPKDHFPLPRIDQLVDSTAG 940


>gb|AAS01973.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group]
          Length = 1403

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/97 (60%), Positives = 73/97 (75%)
 Frame = +3

Query: 6    IATHQLNIAPAVKPVKQKKRNFVEDRNQAINEEVDKLLRAGTLKEVFYPTWLSNPVMVKK 185
            I  H+L + P  KPVKQ+ R F  DR QAI EE+DKLL+AG +KEV +P WL+NPVMV+K
Sbjct: 834  IIEHKLMVRPDAKPVKQRLRRFAPDRKQAIREELDKLLKAGFIKEVLHPEWLANPVMVRK 893

Query: 186  GDNTWRMCVDYTDLNKACPKDCYPLRVIEQKVDALIG 296
             +  WRMCVD+TDLNKACPKD +PL  I+Q VD+  G
Sbjct: 894  ANGKWRMCVDFTDLNKACPKDHFPLPRIDQLVDSTAG 930


>emb|CAE03595.1| OSJNBa0087O24.18 [Oryza sativa Japonica Group]
          Length = 1512

 Score =  129 bits (323), Expect = 3e-28
 Identities = 58/97 (59%), Positives = 73/97 (75%)
 Frame = +3

Query: 6   IATHQLNIAPAVKPVKQKKRNFVEDRNQAINEEVDKLLRAGTLKEVFYPTWLSNPVMVKK 185
           +  H+L + P  KPVKQK R F  DR QAI EE+DKLL+AG ++EV +P WL+NPVMV+K
Sbjct: 679 VIEHKLMVRPDAKPVKQKLRRFAPDRKQAIREELDKLLKAGFIREVLHPEWLANPVMVRK 738

Query: 186 GDNTWRMCVDYTDLNKACPKDCYPLRVIEQKVDALIG 296
            +  WRMCVD+TDLNKACPKD +PL  I+Q VD+  G
Sbjct: 739 ANGKWRMCVDFTDLNKACPKDHFPLPQIDQLVDSTAG 775


>gb|AAO66548.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group]
          Length = 1380

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/97 (60%), Positives = 73/97 (75%)
 Frame = +3

Query: 6    IATHQLNIAPAVKPVKQKKRNFVEDRNQAINEEVDKLLRAGTLKEVFYPTWLSNPVMVKK 185
            I  H+L + P  KPVKQ+ R F  DR QAI EE+DKLL+AG +KEV +P WL+NPVMV+K
Sbjct: 811  IIEHKLMVRPDAKPVKQRLRRFAPDRKQAIREELDKLLKAGFIKEVLHPEWLANPVMVRK 870

Query: 186  GDNTWRMCVDYTDLNKACPKDCYPLRVIEQKVDALIG 296
             +  WRMCVD+TDLNKACPKD +PL  I+Q VD+  G
Sbjct: 871  ANGKWRMCVDFTDLNKACPKDHFPLPRIDQLVDSTAG 907


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