BLASTX nr result

ID: Cephaelis21_contig00054322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054322
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    77   1e-12
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    70   2e-10
emb|CAN64078.1| hypothetical protein VITISV_041213 [Vitis vinifera]    70   2e-10
emb|CAN69266.1| hypothetical protein VITISV_043642 [Vitis vinifera]    70   2e-10
emb|CAN79549.1| hypothetical protein VITISV_022646 [Vitis vinifera]    69   3e-10

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   KLALVKWDKCCQPMGHGGLGIKNLHNQNKSLLMKLGVQLITKREALWVKVIRSKYRLSKA 181
           K  LV WD CC P  +GGLG K  H+ N++ LMK+   LI + + LW +V+ SKY  +  
Sbjct: 265 KAHLVSWDVCCLPKMNGGLGFKRPHHMNEAFLMKMLWNLIKQPDKLWCRVLYSKYGRNND 324

Query: 182 IPENL-QKGRASHVMNSIASIWEEVKQNVYWVMGNGETIKF 301
           +  N+  +   S +  +I  IW++ K++V W +G+G +  F
Sbjct: 325 LNNNISSQPYDSPLWKAIVGIWDDFKRHVIWQIGDGRSTNF 365


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
 Frame = +2

Query: 2    KLALVKWDKCCQPMGHGGLGIKNLHNQNKSLLMKLGVQLITKREALWVKVIRSKYRLSKA 181
            K  L+ W K C+P   GG+G+++  + NK+L+ K+G +L+  +E+LW +V+R KY++   
Sbjct: 698  KQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVVRKKYKVGGV 757

Query: 182  IPENLQK--GRASHVMNSIA-SIWEEVKQNVYWVMGNGETIKF 301
               +  K   R S    S+A  + E V + V WV G+G TI+F
Sbjct: 758  QDTSWLKPQPRWSSTWRSVAVGLREVVVKGVGWVPGDGCTIRF 800


>emb|CAN64078.1| hypothetical protein VITISV_041213 [Vitis vinifera]
          Length = 1017

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
 Frame = +2

Query: 2    KLALVKWDKCCQPMGHGGLGIKNLHNQNKSLLMKLGVQLITKREALWVKVIRSKYRLSKA 181
            K+ LVKW+  C    +GGLG+K+L   NK LL K   +   +REA W +VIR KY   + 
Sbjct: 753  KIHLVKWELVCLEKDNGGLGVKSLSILNKXLLCKWSWRFAMEREAFWNQVIRGKYGEEQG 812

Query: 182  IPENLQKGRASH---VMNSIASIWEEVKQNVYWVMGNGETIKF 301
               + +    +H   +  ++   WE VK  + +V+GNG+ IKF
Sbjct: 813  GXSSKEARGETHGVGLWKTLRKEWEVVKSRLVFVVGNGKRIKF 855


>emb|CAN69266.1| hypothetical protein VITISV_043642 [Vitis vinifera]
          Length = 576

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
 Frame = +2

Query: 2   KLALVKWDKCCQPMGHGGLGIKNLHNQNKSLLMKLGVQLITKREALWVKVIRSKYRLSK- 178
           K+ LV+W+  C    +GGLG+K+L   NK+LL K   +   +REA W +VIR KY   + 
Sbjct: 187 KIHLVRWELVCLEKDNGGLGVKSLSILNKALLCKWSWRFAMEREAFWNQVIRGKYGEEQG 246

Query: 179 --AIPENLQKGRASHVMNSIASIWEEVKQNVYWVMGNGETIKF 301
             +  E   +G    +  ++   WE VK  + +V+GNG+ IKF
Sbjct: 247 GWSSKEARGEGHGVGLWKTLRKEWEVVKSRLVFVVGNGKRIKF 289


>emb|CAN79549.1| hypothetical protein VITISV_022646 [Vitis vinifera]
          Length = 798

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
 Frame = +2

Query: 2   KLALVKWDKCCQPMGHGGLGIKNLHNQNKSLLMKLGVQLITKREALWVKVIRSKYRLSKA 181
           K+ LVKW+  C    +GGLG+K+L   NK+LL K   +   +REA W +VIR KY   + 
Sbjct: 410 KIHLVKWELVCLEKDNGGLGVKSLSILNKALLCKWSWRFAMEREAFWNQVIRGKYGEEQG 469

Query: 182 IPENLQKGRASH---VMNSIASIWEEVKQNVYWVMGNGETIKF 301
              + +    +H   +  ++   WE VK  + +V+GNG+ IKF
Sbjct: 470 GWSSKEARGETHGVGLWKTLRKEWEVVKSRLVFVVGNGKRIKF 512


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