BLASTX nr result

ID: Cephaelis21_contig00054213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054213
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304512.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002298019.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002509836.1| conserved hypothetical protein [Ricinus comm...    87   1e-15
ref|XP_003517472.1| PREDICTED: uncharacterized protein LOC100798...    62   6e-08
ref|NP_198954.2| CCT motif family protein [Arabidopsis thaliana]...    55   5e-06

>ref|XP_002304512.1| predicted protein [Populus trichocarpa] gi|222841944|gb|EEE79491.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  100 bits (249), Expect = 1e-19
 Identities = 57/88 (64%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
 Frame = +3

Query: 3   SFEGKPTDFLYPPRFDSLLESPNLQSQVLTPTETNFSSPQMRRVCSTGDLQ--VKTTPAR 176
           SFEGKP  FL+ PRFD+LLESPN QSQ L+  E NF + Q+RRV STGDLQ   +TT A 
Sbjct: 157 SFEGKP-GFLFQPRFDTLLESPNYQSQALSSPENNFLAGQLRRVYSTGDLQNINRTTHAT 215

Query: 177 TVLSSSPLPTEGLFMEEPNFKVGRYSAE 260
               SSPL TE  F+EE NFKVGRYSAE
Sbjct: 216 ERSLSSPLATESSFIEESNFKVGRYSAE 243


>ref|XP_002298019.1| predicted protein [Populus trichocarpa] gi|222845277|gb|EEE82824.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 54/88 (61%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
 Frame = +3

Query: 3   SFEGKPTDFLYPPRFDSLLESPNLQSQVLTPTETNFSSPQMRRVCSTGDLQ-VKTTPART 179
           SFEG P  FL+ PRFD+L ESPN Q Q L+  E NF + Q+RRVCS GDLQ +  TP  T
Sbjct: 155 SFEGNP-GFLFQPRFDTLFESPNYQGQALSLPENNFLAGQLRRVCSAGDLQSINKTPHTT 213

Query: 180 VLS-SSPLPTEGLFMEEPNFKVGRYSAE 260
             S SSPL TE  F+E+ NFKVGRYSAE
Sbjct: 214 QRSFSSPLATESSFIEDSNFKVGRYSAE 241


>ref|XP_002509836.1| conserved hypothetical protein [Ricinus communis]
           gi|223549735|gb|EEF51223.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 349

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 55/95 (57%), Positives = 62/95 (65%), Gaps = 9/95 (9%)
 Frame = +3

Query: 3   SFEGKPTDFLYPPRFDSLLES----PNL-QSQVLTPTETNFSSPQMRRVCSTGDLQVKTT 167
           SFEGKP D L+ P FD+LLES    PN  Q+Q L+P E  F +  MRRVCSTGDLQ  T 
Sbjct: 157 SFEGKP-DVLFQPHFDTLLESSSSSPNYHQNQTLSPPENTFLAGHMRRVCSTGDLQ-NTR 214

Query: 168 PARTVLS----SSPLPTEGLFMEEPNFKVGRYSAE 260
            A T+ +    SSP  TE  F EE NFKVGRYSAE
Sbjct: 215 TAHTITTQRSFSSPSGTESSFTEEANFKVGRYSAE 249


>ref|XP_003517472.1| PREDICTED: uncharacterized protein LOC100798428 [Glycine max]
          Length = 279

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 42/87 (48%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   SFEGKPTDFLYPPRFDSLLESPNLQSQVLTPTETNFSSPQMRRVCSTGDLQ-VKTTPART 179
           SF+GKP  F + P  D+L++    Q   L   E  F + QMRRVCSTGDLQ +K+T    
Sbjct: 124 SFDGKP-GFPFEPHPDTLMD---FQCHALNSPENTFFAAQMRRVCSTGDLQNMKSTDMSQ 179

Query: 180 VLSSSPLPTEGLFMEEPNFKVGRYSAE 260
               SPL      +EE NFKVGRYSAE
Sbjct: 180 --KGSPL------LEEANFKVGRYSAE 198


>ref|NP_198954.2| CCT motif family protein [Arabidopsis thaliana]
           gi|55978843|gb|AAV68883.1| hypothetical protein
           AT5G41380 [Arabidopsis thaliana]
           gi|60547915|gb|AAX23921.1| hypothetical protein
           At5g41380 [Arabidopsis thaliana]
           gi|332007288|gb|AED94671.1| CCT motif family protein
           [Arabidopsis thaliana]
          Length = 307

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 40/86 (46%), Positives = 47/86 (54%)
 Frame = +3

Query: 3   SFEGKPTDFLYPPRFDSLLESPNLQSQVLTPTETNFSSPQMRRVCSTGDLQVKTTPARTV 182
           S EGK T     P    +++S NL    L+  E  F S QMRRV STGDLQ      R+ 
Sbjct: 136 SVEGKQTQV---PFNIPMMDSSNLSYNNLSSPENAFFSSQMRRVYSTGDLQNNMEMQRS- 191

Query: 183 LSSSPLPTEGLFMEEPNFKVGRYSAE 260
             +S +P    F EE NFKVGRYSAE
Sbjct: 192 SENSTMP----FSEEQNFKVGRYSAE 213


Top