BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054206
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD40135.1|AF149413_16 contains similarity to retrotransposon...   108   5e-22
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...   103   1e-20
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   101   6e-20
gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi...   101   6e-20
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   101   6e-20

>gb|AAD40135.1|AF149413_16 contains similarity to retrotransposon Ta11-1 [Arabidopsis
           thaliana]
          Length = 220

 Score =  108 bits (270), Expect = 5e-22
 Identities = 48/90 (53%), Positives = 67/90 (74%)
 Frame = -1

Query: 285 IMSCISTPSFAFNLNGCSGGYVLPSRGIRQGDPISLYLFLICSEGFSHLINSAVQNNVLS 106
           +MSC++T S+   +NG   G V+P RG+RQGDP+S +LF++C+EG SHL+N A Q  ++S
Sbjct: 106 VMSCVTTVSYTVLVNGHPHGLVVPQRGLRQGDPLSPFLFVLCTEGLSHLLNRAEQQGLIS 165

Query: 105 GVQISKHGPSLTHLLFADDSLLFCKANPSQ 16
           G++ S  GPS+ HLLFADDSL  CKA+  Q
Sbjct: 166 GMRFSPEGPSIHHLLFADDSLFVCKADDDQ 195


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
           gi|976278|gb|AAA75254.1| reverse transcriptase
           [Arabidopsis thaliana]
          Length = 1333

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/95 (48%), Positives = 71/95 (74%)
 Frame = -1

Query: 285 IMSCISTPSFAFNLNGCSGGYVLPSRGIRQGDPISLYLFLICSEGFSHLINSAVQNNVLS 106
           IM  IS+ S++  +N  + G ++PSRG+RQGDP+S +LF++CSEG +HL+N A +  +LS
Sbjct: 608 IMFMISSVSYSVLINDKAFGNIVPSRGLRQGDPLSPFLFVLCSEGLTHLMNRAERQGLLS 667

Query: 105 GVQISKHGPSLTHLLFADDSLLFCKANPSQIAAVK 1
           G++ S++GP++ HLLFADDSL  CKA   ++  +K
Sbjct: 668 GIRFSENGPAIHHLLFADDSLFMCKAVKEEVTVIK 702


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  101 bits (252), Expect = 6e-20
 Identities = 47/94 (50%), Positives = 66/94 (70%)
 Frame = -1

Query: 285 IMSCISTPSFAFNLNGCSGGYVLPSRGIRQGDPISLYLFLICSEGFSHLINSAVQNNVLS 106
           +M+CIS+ SF FN+NG   G + PSRG+RQGDPIS YLFL+C++ FS L++ A     + 
Sbjct: 609 VMACISSVSFTFNVNGVVEGSLSPSRGLRQGDPISPYLFLLCADAFSTLLSKAASEKKIH 668

Query: 105 GVQISKHGPSLTHLLFADDSLLFCKANPSQIAAV 4
           G QI +  P ++HL FADDS+LF KA+  + + V
Sbjct: 669 GAQICRGAPVVSHLFFADDSILFTKASVQECSMV 702


>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
           gi|222630794|gb|EEE62926.1| hypothetical protein
           OsJ_17731 [Oryza sativa Japonica Group]
          Length = 893

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/87 (55%), Positives = 64/87 (73%)
 Frame = -1

Query: 285 IMSCISTPSFAFNLNGCSGGYVLPSRGIRQGDPISLYLFLICSEGFSHLINSAVQNNVLS 106
           IM C+ST ++   +NG     ++PSRG+RQGDPIS YLFLIC+EGFS L+ +A +   LS
Sbjct: 281 IMRCVSTVTYRIKVNGDLTDQIIPSRGLRQGDPISPYLFLICAEGFSSLLYAAEERGDLS 340

Query: 105 GVQISKHGPSLTHLLFADDSLLFCKAN 25
           GV++ +  PS++HLLFADDSLL  K N
Sbjct: 341 GVKVCQQAPSVSHLLFADDSLLLFKVN 367


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  101 bits (252), Expect = 6e-20
 Identities = 43/94 (45%), Positives = 66/94 (70%)
 Frame = -1

Query: 285 IMSCISTPSFAFNLNGCSGGYVLPSRGIRQGDPISLYLFLICSEGFSHLINSAVQNNVLS 106
           +M C+ T S++F +NG   G V+PSRG+RQGDP+S YLF++C+E  S L   A +  V+ 
Sbjct: 547 VMQCVCTVSYSFLINGSPQGSVVPSRGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGVMV 606

Query: 105 GVQISKHGPSLTHLLFADDSLLFCKANPSQIAAV 4
           G+++++  P + HLLFADD++ FCK NP+   A+
Sbjct: 607 GIRVARGSPQVNHLLFADDTMFFCKTNPTCCGAL 640