BLASTX nr result

ID: Cephaelis21_contig00054176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054176
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298855.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
gb|ABA96650.1| retrotransposon protein, putative, unclassified [...    58   9e-07
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]          57   2e-06

>ref|XP_002298855.1| predicted protein [Populus trichocarpa] gi|222846113|gb|EEE83660.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/77 (37%), Positives = 41/77 (53%)
 Frame = -1

Query: 233 GTWVDDQEKLQEAATNFFKNLYTQNERIPSSCMRRGRFPLLSRRVMENLARAPTREEIKK 54
           G+W  +   LQ  A NF+K+L+  N+ I  +       P LS   +  LA++ T+EE+  
Sbjct: 473 GSWCSEDNTLQVEAVNFYKSLFYYNDTIELNAFEGVTIPKLSSEGVSELAKSVTKEEVDI 532

Query: 53  ALFEMHPLKAPGIDGLH 3
           AL  M   KAPG DG H
Sbjct: 533 ALMSMGSYKAPGKDGFH 549


>gb|ABA96650.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1100

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/75 (36%), Positives = 49/75 (65%)
 Frame = -1

Query: 233 GTWVDDQEKLQEAATNFFKNLYTQNERIPSSCMRRGRFPLLSRRVMENLARAPTREEIKK 54
           G+W D +++++  ATNFFK+LYT++  +    +       ++ ++ E+L +A + +EI  
Sbjct: 493 GSWTDQRKEMETMATNFFKDLYTKDPLVTPQPLLDLIMLKVTEQMNEDLCKAFSDKEISD 552

Query: 53  ALFEMHPLKAPGIDG 9
           ALF++ P+KAPG DG
Sbjct: 553 ALFQIGPIKAPGPDG 567


>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/75 (36%), Positives = 40/75 (53%)
 Frame = -1

Query: 233  GTWVDDQEKLQEAATNFFKNLYTQNERIPSSCMRRGRFPLLSRRVMENLARAPTREEIKK 54
            G W  D E L + A +F+K+L+   + +   C+     P L+ +   NL    T EE+K 
Sbjct: 779  GVWETDPEVLSQEAESFYKSLFCHLDDVDLGCLGDVPLPSLNEKACNNLTAPVTMEEVKA 838

Query: 53   ALFEMHPLKAPGIDG 9
            A+F M+  KAPG DG
Sbjct: 839  AVFHMNSFKAPGPDG 853


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