BLASTX nr result

ID: Cephaelis21_contig00054001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054001
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat...   193   1e-47
ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat...   192   2e-47
ref|XP_002309575.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47
ref|NP_188131.1| pentatricopeptide repeat-containing protein [Ar...   157   6e-37
dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]        157   6e-37

>ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera] gi|296083673|emb|CBI23662.3|
           unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  193 bits (490), Expect = 1e-47
 Identities = 88/129 (68%), Positives = 105/129 (81%)
 Frame = +1

Query: 1   DKQIHFFYNGDEMHPLVESIHEILKEMEKRMREETGYVYEISFSLHDVEEESKQESLRLH 180
           +K+IHFFY GD+ HPL E IHE+LKEME+R++EE GY Y + F+LHDVEEESK+E+LR+H
Sbjct: 555 NKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVH 614

Query: 181 SEKXXXXXXXXXXXXEKGGKAIRIFKNLRVCGDCHEFIKGLSKILGKVFMVRDANRFHKF 360
           SEK            EK G  IR+FKNLRVCGDCHEFIKGLSKIL KVF+VRDANRFH+F
Sbjct: 615 SEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRF 674

Query: 361 ENGVCSCGD 387
           E+G+CSCGD
Sbjct: 675 EDGLCSCGD 683


>ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  192 bits (488), Expect = 2e-47
 Identities = 91/130 (70%), Positives = 105/130 (80%), Gaps = 1/130 (0%)
 Frame = +1

Query: 1   DKQIHFFYNGDEMHPLVESIHEILKEMEKRMREETGYVYEISFSLHDVEEESKQESLRLH 180
           DK+IH FYNGD MHPL+E IHE+LKEMEKR++EE GYV+ I+FSLHDVEEESK ESLR+H
Sbjct: 455 DKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVKEEMGYVHSINFSLHDVEEESKMESLRVH 514

Query: 181 SEKXXXXXXXXXXXXE-KGGKAIRIFKNLRVCGDCHEFIKGLSKILGKVFMVRDANRFHK 357
           SEK            + KG + IRIFKNLRVCGDCH FIKGLSK+L   F+VRDANRFH+
Sbjct: 515 SEKLAIGLVLVRRGLKLKGERVIRIFKNLRVCGDCHAFIKGLSKVLKIAFVVRDANRFHR 574

Query: 358 FENGVCSCGD 387
           FENG+CSCGD
Sbjct: 575 FENGLCSCGD 584


>ref|XP_002309575.1| predicted protein [Populus trichocarpa] gi|222855551|gb|EEE93098.1|
           predicted protein [Populus trichocarpa]
          Length = 653

 Score =  191 bits (486), Expect = 4e-47
 Identities = 87/129 (67%), Positives = 104/129 (80%)
 Frame = +1

Query: 1   DKQIHFFYNGDEMHPLVESIHEILKEMEKRMREETGYVYEISFSLHDVEEESKQESLRLH 180
           DK++HFFY GD+ HPL E IHEILKEME+RM+EE GYVY + ++LHDVEEESK ++LR+H
Sbjct: 523 DKEVHFFYGGDDTHPLTEKIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVH 582

Query: 181 SEKXXXXXXXXXXXXEKGGKAIRIFKNLRVCGDCHEFIKGLSKILGKVFMVRDANRFHKF 360
           SEK            E+G K IR+FKNLRVCGDCHEFIKGLSKIL  VF+VRDANRFH+F
Sbjct: 583 SEKLAIGLALVCGGLEEGRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRF 642

Query: 361 ENGVCSCGD 387
           E+G+CSC D
Sbjct: 643 EDGLCSCRD 651


>ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546753|sp|P0C898.1|PP232_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g15130 gi|332642102|gb|AEE75623.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 689

 Score =  157 bits (398), Expect = 6e-37
 Identities = 72/129 (55%), Positives = 92/129 (71%)
 Frame = +1

Query: 1   DKQIHFFYNGDEMHPLVESIHEILKEMEKRMREETGYVYEISFSLHDVEEESKQESLRLH 180
           ++++HFF +G++ HPL   I E LKE E+R+REE GYVY +   LHD+++ESK+E+LR H
Sbjct: 559 EREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAH 618

Query: 181 SEKXXXXXXXXXXXXEKGGKAIRIFKNLRVCGDCHEFIKGLSKILGKVFMVRDANRFHKF 360
           SEK             + GK IR+FKNLRVC DCHEFIKGLSKI    ++VRDA RFH F
Sbjct: 619 SEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSF 678

Query: 361 ENGVCSCGD 387
           E+G CSCGD
Sbjct: 679 EDGCCSCGD 687


>dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  157 bits (398), Expect = 6e-37
 Identities = 72/129 (55%), Positives = 92/129 (71%)
 Frame = +1

Query: 1    DKQIHFFYNGDEMHPLVESIHEILKEMEKRMREETGYVYEISFSLHDVEEESKQESLRLH 180
            ++++HFF +G++ HPL   I E LKE E+R+REE GYVY +   LHD+++ESK+E+LR H
Sbjct: 930  EREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAH 989

Query: 181  SEKXXXXXXXXXXXXEKGGKAIRIFKNLRVCGDCHEFIKGLSKILGKVFMVRDANRFHKF 360
            SEK             + GK IR+FKNLRVC DCHEFIKGLSKI    ++VRDA RFH F
Sbjct: 990  SEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSF 1049

Query: 361  ENGVCSCGD 387
            E+G CSCGD
Sbjct: 1050 EDGCCSCGD 1058


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