BLASTX nr result

ID: Cephaelis21_contig00053874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053874
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containi...   190   1e-46
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,...   189   2e-46
ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   175   3e-42
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   175   3e-42

>ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
           gi|449493172|ref|XP_004159212.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score =  190 bits (482), Expect = 1e-46
 Identities = 90/126 (71%), Positives = 106/126 (84%)
 Frame = +1

Query: 1   IELYLEMVDCDVEPNGFTLSAVIKACSELGDLRLGKCFHGVVIKYNFDSNHVIVSSLIDM 180
           IEL+ +M+D  +EPNGFTLSAVIKACSE+G+L LGKCFHGVV++  FDSN VI+SSLIDM
Sbjct: 147 IELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDM 206

Query: 181 YGRNYESEDSRKLLDELLEPDTVCWTSVISAYTRNDLYEKALGFFYAMHRKSGFFPDGFT 360
           YGRN  S D+R+L DELLEPD VCWT+VISA+TRNDLYE+ALGFFY  HR     PD +T
Sbjct: 207 YGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYT 266

Query: 361 FGSLLT 378
           FGS+LT
Sbjct: 267 FGSVLT 272



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/112 (36%), Positives = 64/112 (57%)
 Frame = +1

Query: 40  PNGFTLSAVIKACSELGDLRLGKCFHGVVIKYNFDSNHVIVSSLIDMYGRNYESEDSRKL 219
           P+ +T  +V+ AC  LG LR G+  H  VI Y F  N V  SSL+DMYG+    E S++L
Sbjct: 262 PDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRL 321

Query: 220 LDELLEPDTVCWTSVISAYTRNDLYEKALGFFYAMHRKSGFFPDGFTFGSLL 375
            D +   ++V W+++++ Y  N  YEKA+  F  M        D ++FG+++
Sbjct: 322 FDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKE-----VDLYSFGTVI 368


>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  189 bits (480), Expect = 2e-46
 Identities = 87/126 (69%), Positives = 106/126 (84%)
 Frame = +1

Query: 1   IELYLEMVDCDVEPNGFTLSAVIKACSELGDLRLGKCFHGVVIKYNFDSNHVIVSSLIDM 180
           ++L+ EM+D  V+PN FTLSAVIKAC++LG L LGKCFH V++   F SNHVI S+LID+
Sbjct: 138 LDLFWEMLDVGVDPNAFTLSAVIKACTDLGTLMLGKCFHCVIMIRGFHSNHVIGSALIDL 197

Query: 181 YGRNYESEDSRKLLDELLEPDTVCWTSVISAYTRNDLYEKALGFFYAMHRKSGFFPDGFT 360
           YGRNYE +D+R+L DELLEPD +CWTSVISAYTRND+Y+KALGFFY M RK G  PDGFT
Sbjct: 198 YGRNYELDDARRLFDELLEPDAICWTSVISAYTRNDMYDKALGFFYLMQRKLGLAPDGFT 257

Query: 361 FGSLLT 378
           FG++LT
Sbjct: 258 FGTVLT 263



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/122 (31%), Positives = 67/122 (54%)
 Frame = +1

Query: 10  YLEMVDCDVEPNGFTLSAVIKACSELGDLRLGKCFHGVVIKYNFDSNHVIVSSLIDMYGR 189
           YL      + P+GFT   V+ AC  L  L+ GK  H  +I   F  N V+ SSL+DMYG+
Sbjct: 243 YLMQRKLGLAPDGFTFGTVLTACGNLRRLKQGKEVHAKLITSGFSGNVVVESSLVDMYGK 302

Query: 190 NYESEDSRKLLDELLEPDTVCWTSVISAYTRNDLYEKALGFFYAMHRKSGFFPDGFTFGS 369
               ++S+++ D +   ++V W++++  + +N  +E  +  F    R+ G   D ++FG+
Sbjct: 303 CGLVDESQRVFDRMSVKNSVSWSALLGGFCQNGDFESVIRIF----REMGEADDLYSFGT 358

Query: 370 LL 375
           +L
Sbjct: 359 VL 360


>ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|222858292|gb|EEE95839.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  178 bits (451), Expect = 5e-43
 Identities = 84/126 (66%), Positives = 103/126 (81%)
 Frame = +1

Query: 1   IELYLEMVDCDVEPNGFTLSAVIKACSELGDLRLGKCFHGVVIKYNFDSNHVIVSSLIDM 180
           +EL+LEM+   +EPNGFTLSAVIKACS LGDLRLGKCFHGVV+   FD N VI ++LIDM
Sbjct: 147 LELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDM 206

Query: 181 YGRNYESEDSRKLLDELLEPDTVCWTSVISAYTRNDLYEKALGFFYAMHRKSGFFPDGFT 360
           YGRN   +D+  +  EL +PD +CWTS+ISA+TRND+Y+KALGFFY+M RK G  PDGFT
Sbjct: 207 YGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFT 266

Query: 361 FGSLLT 378
           FG++LT
Sbjct: 267 FGTVLT 272



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/114 (32%), Positives = 59/114 (51%)
 Frame = +1

Query: 34  VEPNGFTLSAVIKACSELGDLRLGKCFHGVVIKYNFDSNHVIVSSLIDMYGRNYESEDSR 213
           + P+GFT   V+ AC  LG L+ GK  H  VI      N  + SSL+DMYG+      S+
Sbjct: 260 LSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQ 319

Query: 214 KLLDELLEPDTVCWTSVISAYTRNDLYEKALGFFYAMHRKSGFFPDGFTFGSLL 375
            + D +   + V WT+++  Y +N  +E  +  F     + G   D ++FG++L
Sbjct: 320 CVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIF-----REGKKVDTYSFGTVL 368


>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  175 bits (444), Expect = 3e-42
 Identities = 82/126 (65%), Positives = 103/126 (81%)
 Frame = +1

Query: 1   IELYLEMVDCDVEPNGFTLSAVIKACSELGDLRLGKCFHGVVIKYNFDSNHVIVSSLIDM 180
           +EL+ +M+   VEPN FTLSAVIKACSELGDL+LG+ FHGVV+   FDSN+VI S+LIDM
Sbjct: 146 LELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDM 205

Query: 181 YGRNYESEDSRKLLDELLEPDTVCWTSVISAYTRNDLYEKALGFFYAMHRKSGFFPDGFT 360
           +GRN   +D+R+L DELLEPD +CWTS+ISA TRND +++AL FFY+M R  G  PDGFT
Sbjct: 206 HGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFT 265

Query: 361 FGSLLT 378
           FG++LT
Sbjct: 266 FGTVLT 271



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/112 (33%), Positives = 62/112 (55%)
 Frame = +1

Query: 40  PNGFTLSAVIKACSELGDLRLGKCFHGVVIKYNFDSNHVIVSSLIDMYGRNYESEDSRKL 219
           P+GFT   V+ AC  LG L+ GK  H  VI   F  N V+ SSL+DMYG+     +S+++
Sbjct: 261 PDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRI 320

Query: 220 LDELLEPDTVCWTSVISAYTRNDLYEKALGFFYAMHRKSGFFPDGFTFGSLL 375
            D +   ++V W++++  Y +N  ++  +  F  M +      D + FG++L
Sbjct: 321 FDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEK-----VDLYCFGTIL 367


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  175 bits (444), Expect = 3e-42
 Identities = 82/126 (65%), Positives = 103/126 (81%)
 Frame = +1

Query: 1   IELYLEMVDCDVEPNGFTLSAVIKACSELGDLRLGKCFHGVVIKYNFDSNHVIVSSLIDM 180
           +EL+ +M+   VEPN FTLSAVIKACSELGDL+LG+ FHGVV+   FDSN+VI S+LIDM
Sbjct: 205 LELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDM 264

Query: 181 YGRNYESEDSRKLLDELLEPDTVCWTSVISAYTRNDLYEKALGFFYAMHRKSGFFPDGFT 360
           +GRN   +D+R+L DELLEPD +CWTS+ISA TRND +++AL FFY+M R  G  PDGFT
Sbjct: 265 HGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFT 324

Query: 361 FGSLLT 378
           FG++LT
Sbjct: 325 FGTVLT 330



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/112 (33%), Positives = 62/112 (55%)
 Frame = +1

Query: 40  PNGFTLSAVIKACSELGDLRLGKCFHGVVIKYNFDSNHVIVSSLIDMYGRNYESEDSRKL 219
           P+GFT   V+ AC  LG L+ GK  H  VI   F  N V+ SSL+DMYG+     +S+++
Sbjct: 320 PDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRI 379

Query: 220 LDELLEPDTVCWTSVISAYTRNDLYEKALGFFYAMHRKSGFFPDGFTFGSLL 375
            D +   ++V W++++  Y +N  ++  +  F  M +      D + FG++L
Sbjct: 380 FDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEK-----VDLYCFGTIL 426


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