BLASTX nr result

ID: Cephaelis21_contig00053300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053300
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]   152   3e-35
ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27

>ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
           gi|302143682|emb|CBI22543.3| unnamed protein product
           [Vitis vinifera]
          Length = 728

 Score =  152 bits (384), Expect = 3e-35
 Identities = 64/108 (59%), Positives = 86/108 (79%)
 Frame = -3

Query: 336 NSCWSWMDINVGERVAQKMFTLNPKPASTCVLMSNIYAALGKWGEKIKARKLLIELEAKK 157
           ++CW WMD+ VGERVA+KMF+ +PKP S+ V++SNIYA LG+W EK+  RK+L   + KK
Sbjct: 604 SACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKK 663

Query: 156 NPGCSWIDLNNRVHAFYVDDRTHPCCNMIYATLRHLTASIESFSQFQN 13
           +PGCSWI+LNN++H F ++DR+HP CNMIYATL HLTA+I S   F +
Sbjct: 664 DPGCSWIELNNKIHVFSIEDRSHPYCNMIYATLEHLTANINSVVHFDH 711


>emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score =  152 bits (384), Expect = 3e-35
 Identities = 64/108 (59%), Positives = 86/108 (79%)
 Frame = -3

Query: 336 NSCWSWMDINVGERVAQKMFTLNPKPASTCVLMSNIYAALGKWGEKIKARKLLIELEAKK 157
           ++CW WMD+ VGERVA+KMF+ +PKP S+ V++SNIYA LG+W EK+  RK+L   + KK
Sbjct: 644 SACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKK 703

Query: 156 NPGCSWIDLNNRVHAFYVDDRTHPCCNMIYATLRHLTASIESFSQFQN 13
           +PGCSWI+LNN++H F ++DR+HP CNMIYATL HLTA+I S   F +
Sbjct: 704 DPGCSWIELNNKIHVFSIEDRSHPYCNMIYATLEHLTANINSVVHFDH 751


>ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 728

 Score =  129 bits (325), Expect = 2e-28
 Identities = 55/102 (53%), Positives = 78/102 (76%)
 Frame = -3

Query: 336 NSCWSWMDINVGERVAQKMFTLNPKPASTCVLMSNIYAALGKWGEKIKARKLLIELEAKK 157
           N+ W W D+ VGER A+K+F+L+P P    V++SN+YA LG+WG+K K RK L  LE +K
Sbjct: 614 NASWFWKDMEVGERAAEKLFSLDPNPIFAFVVLSNMYAILGRWGQKTKLRKRLQSLELRK 673

Query: 156 NPGCSWIDLNNRVHAFYVDDRTHPCCNMIYATLRHLTASIES 31
           +PGCSWI+LNN++H F V+D+TH   ++IYAT+ H+TA+I S
Sbjct: 674 DPGCSWIELNNKIHLFSVEDKTHLYSDVIYATVEHITATINS 715


>ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cucumis sativus]
          Length = 710

 Score =  125 bits (314), Expect = 4e-27
 Identities = 54/100 (54%), Positives = 73/100 (73%)
 Frame = -3

Query: 336 NSCWSWMDINVGERVAQKMFTLNPKPASTCVLMSNIYAALGKWGEKIKARKLLIELEAKK 157
           N+CW WMD+ +GE VA+K+ +L+PK  S  +++SNIYA LGKW EKI  R+ L+ L+ KK
Sbjct: 609 NACWFWMDLELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRKLMSLKVKK 668

Query: 156 NPGCSWIDLNNRVHAFYVDDRTHPCCNMIYATLRHLTASI 37
             GCSWID+NN+   F   DR+HP CN IY+TL HL A++
Sbjct: 669 IRGCSWIDVNNKTCVFSAGDRSHPNCNAIYSTLEHLLANV 708


>ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cucumis sativus]
          Length = 710

 Score =  125 bits (314), Expect = 4e-27
 Identities = 54/100 (54%), Positives = 73/100 (73%)
 Frame = -3

Query: 336 NSCWSWMDINVGERVAQKMFTLNPKPASTCVLMSNIYAALGKWGEKIKARKLLIELEAKK 157
           N+CW WMD+ +GE VA+K+ +L+PK  S  +++SNIYA LGKW EKI  R+ L+ L+ KK
Sbjct: 609 NACWFWMDLELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRQLMSLKVKK 668

Query: 156 NPGCSWIDLNNRVHAFYVDDRTHPCCNMIYATLRHLTASI 37
             GCSWID+NN+   F   DR+HP CN IY+TL HL A++
Sbjct: 669 IRGCSWIDVNNKTCVFSAGDRSHPNCNAIYSTLEHLLANV 708


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