BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052868
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   105   4e-21
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...    99   4e-19
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    99   5e-19
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    99   7e-19
emb|CAB75484.1| putative protein [Arabidopsis thaliana]                95   7e-18

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  105 bits (263), Expect = 4e-21
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 2/185 (1%)
 Frame = -3

Query: 579  DAAAILQTPISQCGNKDKLVWHHAQNGRYTIDSGYMWQAAQRPQQLPDPEDSXXXXXEHK 400
            ++ AI + P++     D+ +W  ++NG++T+ S Y  +  +  +  P    S       K
Sbjct: 994  ESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHELLEDRKTGP----STSRGPNLK 1049

Query: 399  MWKRLWGLKIKGKVKHFLWRAYHRILPTSSQLKHKGILVDGICKRCGENEETLKHLLFHC 220
            +W+++W  KI  KVK F W+A H  L   + ++ +G+ +DG C RCGE EET +HL++ C
Sbjct: 1050 LWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGC 1109

Query: 219  PYAQRVWKLAPVKWEGRAFPSDSFQHWWRTLCGIGNKDIHCDR--LELTAYILHTIWKAR 46
              + R W ++P++       + SF+ W  +L      D H D     L   I   IW  R
Sbjct: 1110 DESSRAWYISPLRIHTGNIEAGSFRIWVESLL-----DTHKDTEWWALFWMICWNIWLGR 1164

Query: 45   NEWYF 31
            N+W F
Sbjct: 1165 NKWVF 1169


>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 773

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
 Frame = -3

Query: 540 GNKDKLVWHHAQNGRYTIDSGYMWQAAQRPQQ---LPDPEDSXXXXXEHKMWKRLWGLKI 370
           G  D + W +  +G Y++ SGY        QQ   LP P +         +WK+      
Sbjct: 451 GANDAITWIYTHDGNYSVKSGYHLLRKLSQQQHASLPSPNEVSAQTVFTNIWKQ----NA 506

Query: 369 KGKVKHFLWRAYHRILPTSSQLKHKGILVDGICKRCGENEETLKHLLFHCPYAQRVWKLA 190
             K+KHF WR+ H  LPT+  LK + ++ D  C+RCGE  E + HLLF C  ++ +W+ A
Sbjct: 507 PPKIKHFWWRSAHNALPTAGNLKRRRLITDDTCQRCGEASEDVNHLLFQCRVSKEIWEQA 566

Query: 189 PVK-WEGRAFPSDSFQHWWRTLCGIGNKDIHCDRLELTAYILHTIWKARNEWYFND 25
            +K   G +  S+SF     ++  + N+    D + L  +I   IWK RN+  FN+
Sbjct: 567 HIKLCPGDSLMSNSFNQNLESIQKL-NQSARKD-VSLFPFIGWRIWKMRNDLIFNN 620


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 99.0 bits (245), Expect = 5e-19
 Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 1/186 (0%)
 Frame = -3

Query: 579  DAAAILQTPISQCGNKDKLVWHHAQNGRYTIDSGYMWQAAQRPQQLPDPEDSXXXXXEHK 400
            D   IL    S+    D   W   ++G YT+ SGY W A  R    P  +          
Sbjct: 865  DIPLILGIRPSRTYKSDDFSWSFTKSGNYTVKSGY-WAA--RDLSRPTCDLPFQGPSVSA 921

Query: 399  MWKRLWGLKIKGKVKHFLWRAYHRILPTSSQLKHKGILVDGICKRCGENEETLKHLLFHC 220
            +  ++W +K   K KHF W+     L T+ +L  + I  + +C RCG  EE++ HLLF C
Sbjct: 922  LQAQVWKIKTTRKFKHFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLC 981

Query: 219  PYAQRVWKLAPVKWEGRAFPSDSFQHWWRTLCGIGNK-DIHCDRLELTAYILHTIWKARN 43
            P ++++W L+P+      FP +S  + +  L   G + DI  D +E+  +IL  IWK+RN
Sbjct: 982  PPSRQIWALSPIPSSEYIFPRNSLFYNFDFLLSRGKEFDIAEDIMEIFPWILWYIWKSRN 1041

Query: 42   EWYFND 25
             + F +
Sbjct: 1042 RFIFEN 1047


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 1/175 (0%)
 Frame = -3

Query: 552  ISQCGNKDKLVWHHAQNGRYTIDSGYMWQAAQRPQQLPDPEDSXXXXXEHKMWKRLWGLK 373
            +S    +D   W + +N +YT+ SGY W A      L + E       +  + + +W LK
Sbjct: 1336 LSNYAARDSYKWAYTRNTQYTVRSGY-WVATH--VNLTEEEIINPLEGDVPLKQEIWRLK 1392

Query: 372  IKGKVKHFLWRAYHRILPTSSQLKHKGILVDGICKRCGENEETLKHLLFHCPYAQRVWKL 193
            I  K+KHF+WR     L T++QL+++ I  D  C+RC   +ET+ H++F C YAQ VW+ 
Sbjct: 1393 ITPKIKHFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVVWRS 1452

Query: 192  APVKWEGRAFPSDSFQHWWR-TLCGIGNKDIHCDRLELTAYILHTIWKARNEWYF 31
            A      R   +D+ +   R  L G  N+++      +  +I+  +WK+RNE+ F
Sbjct: 1453 ANFSGSNRLCFTDNLEENIRLILQGKKNQNLPILNGLMPFWIMWRLWKSRNEYLF 1507


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score = 95.1 bits (235), Expect = 7e-18
 Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 5/181 (2%)
 Frame = -3

Query: 552  ISQCGNKDKLVWHHAQNGRYTIDSGYMWQAAQRPQQ----LPDPEDSXXXXXEHKMWKRL 385
            +S     D+L+W +   G YT+ SGY W +   P      +  P  S        +  ++
Sbjct: 615  LSTRSKTDRLIWSYNSTGDYTVRSGY-WLSTHDPSNTIPTMAKPHGSVD------LKTKI 667

Query: 384  WGLKIKGKVKHFLWRAYHRILPTSSQLKHKGILVDGICKRCGENEETLKHLLFHCPYAQR 205
            W L I  K+KHFLWR   + LPT+ +L  +G+ +D  C RC    E++ H LF CP+A  
Sbjct: 668  WNLPIMPKLKHFLWRILSKALPTTDRLTTRGMRIDPGCPRCRRENESINHALFTCPFATM 727

Query: 204  VWKLAPVKWEGRAFPSDSFQ-HWWRTLCGIGNKDIHCDRLELTAYILHTIWKARNEWYFN 28
             W+L+       +  S++ + +    L  + N  I   +  +  ++L  IWKARN   FN
Sbjct: 728  AWRLSDTPLYRSSILSNNIEDNISNILLLLQNTTITDSQKLIPFWLLWRIWKARNNVVFN 787

Query: 27   D 25
            +
Sbjct: 788  N 788