BLASTX nr result

ID: Cephaelis21_contig00052858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052858
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609218.1| Pentatricopeptide repeat-containing protein ...   200   9e-50
emb|CBI28441.3| unnamed protein product [Vitis vinifera]              192   2e-47
emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]   192   2e-47
ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat...   191   7e-47
ref|XP_002333576.1| predicted protein [Populus trichocarpa] gi|2...   190   1e-46

>ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355510273|gb|AES91415.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  200 bits (509), Expect = 9e-50
 Identities = 91/115 (79%), Positives = 104/115 (90%)
 Frame = +2

Query: 2    KSHPDKDAIYAKHKELHLKLKDAGYVPELKYSMFDLEQENKEELLSYHSERLAVAFVLNR 181
            ++HP+K+ IY K KEL  K++DAGYVPE KY+++DLE ENKEELLSYHSE+LA+AFVL R
Sbjct: 1020 QTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTR 1079

Query: 182  KSELPIRIMKNLRICGDCHTAFKYISEIVGRQIILRDSNRFHHFSGGKCSCNDYW 346
            KSELPIRIMKNLR+CGDCHTAFKYIS+IVGRQIILRDSNRFHHF GG CSC DYW
Sbjct: 1080 KSELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134


>emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  192 bits (489), Expect = 2e-47
 Identities = 86/115 (74%), Positives = 102/115 (88%)
 Frame = +2

Query: 2    KSHPDKDAIYAKHKELHLKLKDAGYVPELKYSMFDLEQENKEELLSYHSERLAVAFVLNR 181
            K HP+KD IY K +EL+ K++DAGY+P+ KY++FDLE ENKEELLSYHSE++AVAFVL R
Sbjct: 799  KLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTR 858

Query: 182  KSELPIRIMKNLRICGDCHTAFKYISEIVGRQIILRDSNRFHHFSGGKCSCNDYW 346
            +S LPIRIMKNLR+CGDCH+AF YIS+IVGRQI+LRDSNRFHHF  GKCSC DYW
Sbjct: 859  QSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913


>emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  192 bits (489), Expect = 2e-47
 Identities = 86/115 (74%), Positives = 102/115 (88%)
 Frame = +2

Query: 2    KSHPDKDAIYAKHKELHLKLKDAGYVPELKYSMFDLEQENKEELLSYHSERLAVAFVLNR 181
            K HP+KD IY K +EL+ K++DAGY+P+ KY++FDLE ENKEELLSYHSE++AVAFVL R
Sbjct: 1425 KLHPEKDXIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTR 1484

Query: 182  KSELPIRIMKNLRICGDCHTAFKYISEIVGRQIILRDSNRFHHFSGGKCSCNDYW 346
            +S LPIRIMKNLR+CGDCH+AF YIS+IVGRQI+LRDSNRFHHF  GKCSC DYW
Sbjct: 1485 QSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539


>ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  191 bits (484), Expect = 7e-47
 Identities = 86/115 (74%), Positives = 101/115 (87%)
 Frame = +2

Query: 2    KSHPDKDAIYAKHKELHLKLKDAGYVPELKYSMFDLEQENKEELLSYHSERLAVAFVLNR 181
            ++HP+K+ IY K KE+  K++D GYVPE KY+++DLE ENKEELLSYHSE+LA+AFVL R
Sbjct: 919  QTHPEKEKIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTR 978

Query: 182  KSELPIRIMKNLRICGDCHTAFKYISEIVGRQIILRDSNRFHHFSGGKCSCNDYW 346
            +SELPIRI+KNLR+CGDCHTAFKYIS IV RQIILRDSNRFHHF GG CSC DYW
Sbjct: 979  QSELPIRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033


>ref|XP_002333576.1| predicted protein [Populus trichocarpa] gi|222837227|gb|EEE75606.1|
            predicted protein [Populus trichocarpa]
          Length = 781

 Score =  190 bits (482), Expect = 1e-46
 Identities = 85/114 (74%), Positives = 100/114 (87%)
 Frame = +2

Query: 5    SHPDKDAIYAKHKELHLKLKDAGYVPELKYSMFDLEQENKEELLSYHSERLAVAFVLNRK 184
            SHP+K  IYAK KEL  K++DAGYVP++K++++DLE ENKEELLSYHSE+LAVAFVL R 
Sbjct: 668  SHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAFVLTRN 727

Query: 185  SELPIRIMKNLRICGDCHTAFKYISEIVGRQIILRDSNRFHHFSGGKCSCNDYW 346
            S LPIRIMKNLR+CGDCH+AFKYIS++V R I+LRDSNRFHHF  GKCSC DYW
Sbjct: 728  SGLPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781


Top