BLASTX nr result

ID: Cephaelis21_contig00052812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052812
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511425.1| Cyclic nucleotide-gated ion channel, putativ...    97   1e-18
ref|XP_004155077.1| PREDICTED: probable cyclic nucleotide-gated ...    97   2e-18
ref|XP_004138284.1| PREDICTED: probable cyclic nucleotide-gated ...    97   2e-18
ref|XP_002331696.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002280029.2| PREDICTED: putative cyclic nucleotide-gated ...    92   3e-17

>ref|XP_002511425.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223550540|gb|EEF52027.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 680

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 41/81 (50%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
 Frame = -2

Query: 241 WWQQILDPNGEFVNKWNQIFLATSLLALFIDPLFFFLPTLPNN-CMKIGVNLALTLMSVR 65
           WW QILDP  +FVNKWN IFL T ++ALF+DPL+F+LP +  + CM I + L + +   R
Sbjct: 27  WWNQILDPGSDFVNKWNHIFLVTCMIALFLDPLYFYLPIIGGDACMDIDITLGIWVTFAR 86

Query: 64  TIVDLFSVLQIAMKFRTSYVA 2
           T+ DLF  + + +KFRT++VA
Sbjct: 87  TVTDLFFFMHVVIKFRTAFVA 107


>ref|XP_004155077.1| PREDICTED: probable cyclic nucleotide-gated ion channel 16-like
           [Cucumis sativus]
          Length = 679

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 SLLYDRQKPWWQQILDPNGEFVNKWNQIFLATSLLALFIDPLFFFLPTLPN-NCMKIGVN 92
           SL   R+ PWW +IL+P+ EFV +WN IFL T L ALFIDPL+F+L  +    CM+    
Sbjct: 15  SLTLYRKVPWWDKILEPDSEFVVRWNLIFLVTCLFALFIDPLYFYLIIIGGPGCMRFNTR 74

Query: 91  LALTLMSVRTIVDLFSVLQIAMKFRTSYVA 2
           L + +   RTIVD FS+  I+MKFRT++VA
Sbjct: 75  LGIVITFFRTIVDFFSLFHISMKFRTAFVA 104


>ref|XP_004138284.1| PREDICTED: probable cyclic nucleotide-gated ion channel 16-like
           [Cucumis sativus]
          Length = 702

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 SLLYDRQKPWWQQILDPNGEFVNKWNQIFLATSLLALFIDPLFFFLPTLPN-NCMKIGVN 92
           SL   R+ PWW +IL+P+ EFV +WN IFL T L ALFIDPL+F+L  +    CM+    
Sbjct: 15  SLTLYRKVPWWDKILEPDSEFVVRWNLIFLVTCLFALFIDPLYFYLIIIGGPGCMRFNTR 74

Query: 91  LALTLMSVRTIVDLFSVLQIAMKFRTSYVA 2
           L + +   RTIVD FS+  I+MKFRT++VA
Sbjct: 75  LGIVITFFRTIVDFFSLFHISMKFRTAFVA 104


>ref|XP_002331696.1| predicted protein [Populus trichocarpa] gi|222874174|gb|EEF11305.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/111 (45%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
 Frame = -2

Query: 328 MNSFYVHLESNKLLHHLTIPSLLYDRQK-PWWQQILDPNGEFVNKWNQIFLATSLLALFI 152
           MN+F  +  S    H   +P  L  R+K PWW QI DP  E V+KWN IFL   ++A+F+
Sbjct: 1   MNNFRSYTSS----HFRRLPKSLSIRRKVPWWDQIHDPGSEIVSKWNHIFLVACMIAMFL 56

Query: 151 DPLFFFLPTLPNN-CMKIGVNLALTLMSVRTIVDLFSVLQIAMKFRTSYVA 2
           DPL+ +LP +  + CMKI + L + +   RT  DLF  L I MKFRT++VA
Sbjct: 57  DPLYLYLPIIGGDACMKIDIALGVWVTFARTFTDLFFFLHIFMKFRTAFVA 107


>ref|XP_002280029.2| PREDICTED: putative cyclic nucleotide-gated ion channel 18, partial
           [Vitis vinifera]
          Length = 385

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
 Frame = -2

Query: 253 RQKPWWQQILDPNGEFVNKWNQIFLATSLLALFIDPLFFFLPTLPN-NCMKIGVNLALTL 77
           RQK WW QILDP G  V +WN IFL + LLALF+DPL+F+LP +    C +I + L + +
Sbjct: 11  RQKSWWTQILDPGGRLVTQWNHIFLISCLLALFLDPLYFYLPVIDGPACFRIDLGLGIVV 70

Query: 76  MSVRTIVDLFSVLQIAMKFRTSYVA 2
              RT+ D+F +  + MKFR ++VA
Sbjct: 71  TFFRTVADMFYLTHMIMKFRMAFVA 95


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