BLASTX nr result

ID: Cephaelis21_contig00052741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052741
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containi...   105   3e-21
emb|CBI16904.3| unnamed protein product [Vitis vinifera]              105   3e-21
emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]   104   9e-21
ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containi...    95   5e-18
ref|XP_002331286.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17

>ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = -2

Query: 238 LPIRAFSN-APSPNHRKTFSHIFQECASQRALDPGKQAHARMVITGFKPTIFVSNCLIHL 62
           LPI  FS+   +P  +KTFSHIFQEC+ ++AL PGKQAHARM++T FKPT+FV+NCLI +
Sbjct: 27  LPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQM 86

Query: 61  CVRCSDLQYANKVFDMMYER 2
            ++CSDL++A KVFD M +R
Sbjct: 87  YIKCSDLEFAFKVFDGMPQR 106


>emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = -2

Query: 238 LPIRAFSN-APSPNHRKTFSHIFQECASQRALDPGKQAHARMVITGFKPTIFVSNCLIHL 62
           LPI  FS+   +P  +KTFSHIFQEC+ ++AL PGKQAHARM++T FKPT+FV+NCLI +
Sbjct: 27  LPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQM 86

Query: 61  CVRCSDLQYANKVFDMMYER 2
            ++CSDL++A KVFD M +R
Sbjct: 87  YIKCSDLEFAFKVFDGMPQR 106


>emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
 Frame = -2

Query: 238 LPIRAFSN-APSPNHRKTFSHIFQECASQRALDPGKQAHARMVITGFKPTIFVSNCLIHL 62
           LPI  FS+   +P  +KTFSHIFQEC+ ++AL PGKQAHARM++T FKPT+FV+NCLI +
Sbjct: 27  LPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQM 86

Query: 61  CVRCSDLQYANKVFDMMYER 2
            ++CSDL +A KVFD M +R
Sbjct: 87  YIKCSDLGFAFKVFDGMPQR 106


>ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
           gi|449528041|ref|XP_004171015.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 41/65 (63%), Positives = 55/65 (84%)
 Frame = -2

Query: 196 RKTFSHIFQECASQRALDPGKQAHARMVITGFKPTIFVSNCLIHLCVRCSDLQYANKVFD 17
           RKTFSHIFQEC+++RAL PGK+AHA M+++GF PT+FV+NCLI + V+C  L+YA KVF+
Sbjct: 24  RKTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFE 83

Query: 16  MMYER 2
            M +R
Sbjct: 84  EMPQR 88


>ref|XP_002331286.1| predicted protein [Populus trichocarpa] gi|222873711|gb|EEF10842.1|
           predicted protein [Populus trichocarpa]
          Length = 897

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/68 (60%), Positives = 52/68 (76%)
 Frame = -2

Query: 205 PNHRKTFSHIFQECASQRALDPGKQAHARMVITGFKPTIFVSNCLIHLCVRCSDLQYANK 26
           P   +TFSHI+QEC+ Q +L+PGKQAHARM+  GF+PT FVSNCL+ + ++C  L YA K
Sbjct: 46  PAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACK 105

Query: 25  VFDMMYER 2
           VFD MY R
Sbjct: 106 VFDKMYLR 113


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