BLASTX nr result

ID: Cephaelis21_contig00052678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052678
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...   104   7e-21
gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo...   103   1e-20
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             102   3e-20
emb|CAB75484.1| putative protein [Arabidopsis thaliana]               102   3e-20
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...   102   4e-20

>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/119 (45%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
 Frame = +1

Query: 4   SKREVFSYSTQSVNKRMANWKNKFLNQAGKEVLIKSVIGVLPVYTMSCLKHPGVICKEIE 183
           SKR V  +  + V  R+  WK KFL+ AG+EVLIKSV   +P Y MSC + P  +C EIE
Sbjct: 9   SKRAVLGFVKERVWTRLNGWKEKFLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCHEIE 68

Query: 184 RHIARFW*GSGQEQECKIYWQSWKNFSRAKNEGG-----LHDFNTALMAKQLWRQVSYP 345
             +  FW    +E+  KI+W SWK   ++K +GG     L  FN+AL+AKQ WR V  P
Sbjct: 69  SMVCNFW-WXQKEETRKIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCWRLVQRP 126


>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
          Length = 615

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/120 (42%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
 Frame = +1

Query: 1   RSKREVFSYSTQSVNKRMANWKNKFLNQAGKEVLIKSVIGVLPVYTMSCLKHPGVICKEI 180
           RS+ + FSY    V KR+  WK + L++AGKE+LIKSV+  +P Y MSC      +C E+
Sbjct: 215 RSRSQTFSYLKDRVWKRLQGWKERLLSKAGKEILIKSVVQSIPTYAMSCFDLTKTLCNEL 274

Query: 181 ERHIARFW*GSGQEQECKIYWQSWKNFSRAKNEGG-----LHDFNTALMAKQLWRQVSYP 345
              + RFW  + QE E K++W SW+   R K +GG     LH FN A++A+Q WR +  P
Sbjct: 275 GSLVCRFW-WAQQENENKVHWVSWELLCRRKEQGGIGYRDLHLFNLAMLARQGWRLIMEP 333


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 5/119 (4%)
 Frame = +1

Query: 4   SKREVFSYSTQSVNKRMANWKNKFLNQAGKEVLIKSVIGVLPVYTMSCLKHPGVICKEIE 183
           SK  +FS+    +  R+  W  KFL++ GKEV+IKSV+ VLP Y MSC + P  I  ++ 
Sbjct: 610 SKTRIFSFVRDRLQTRINGWSAKFLSKGGKEVMIKSVVAVLPTYVMSCFRLPKTITSKLT 669

Query: 184 RHIARFW*GSGQEQECKIYWQSWKNFSRAKNEGGL-----HDFNTALMAKQLWRQVSYP 345
             +A+FW  S  E    ++W +W     +K +GGL     +DFN+AL+AKQLWR ++ P
Sbjct: 670 SAVAKFWWSSDGESR-GMHWMAWNKLCSSKADGGLGFRSVNDFNSALLAKQLWRLITVP 727


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score =  102 bits (254), Expect = 3e-20
 Identities = 54/120 (45%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
 Frame = +1

Query: 1   RSKREVFSYSTQSVNKRMANWKNKFLNQAGKEVLIKSVIGVLPVYTMSCLKHPGVICKEI 180
           R K+E+F+Y    V +R A+W  KFL+ AGKE+L+KSV   +PVY MSC K P  I  EI
Sbjct: 380 RKKKEMFNYIIDRVKERTASWSAKFLSPAGKEILLKSVALAMPVYAMSCFKLPQGIVSEI 439

Query: 181 ERHIARFW*GSGQEQECKIYWQSWKNFSRAKNEGG-----LHDFNTALMAKQLWRQVSYP 345
           E  +  FW      +   I W +WK    +K EGG     L  FN AL+AKQ WR + YP
Sbjct: 440 ESLLMNFWWEKASNKR-GIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAWRIIQYP 498


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/119 (44%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
 Frame = +1

Query: 4   SKREVFSYSTQSVNKRMANWKNKFLNQAGKEVLIKSVIGVLPVYTMSCLKHPGVICKEIE 183
           SKR V  +  + V  R+  WK K L+ AG+EVLIKSV   +P Y MSC + P  +C EIE
Sbjct: 9   SKRAVLGFVKERVWSRLNGWKEKSLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCXEIE 68

Query: 184 RHIARFW*GSGQEQECKIYWQSWKNFSRAKNEGG-----LHDFNTALMAKQLWRQVSYP 345
             +  FW G  +E+  KI+W SWK   ++K  GG     L  FN+AL+AKQ WR    P
Sbjct: 69  SMVCNFWWGQ-KEETRKIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQRP 126


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