BLASTX nr result

ID: Cephaelis21_contig00052655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052655
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    78   7e-13
ref|NP_063981.1| orf129a gene product (mitochondrion) [Beta vulg...    75   6e-12
ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulg...    75   6e-12
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...    74   9e-12
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    74   2e-11

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/77 (46%), Positives = 50/77 (64%)
 Frame = +1

Query: 1   RMAKVLQHIIHEAQSVFVEGRSMVENIHIAQELIAKYARKRISPRYLIKVDIRKEYDFVS 180
           RM  ++  +++EAQS F+ GR + +NI +A ELI  Y RK +SPR ++KVDIRK YD V 
Sbjct: 534 RMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVE 593

Query: 181 WIFLRSTMLRLSFPQLF 231
           W FL + +    FP  F
Sbjct: 594 WSFLETLLYEFGFPSRF 610


>ref|NP_063981.1| orf129a gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|9049283|dbj|BAA99293.1| orf129a [Beta
           vulgaris subsp. vulgaris]
          Length = 129

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/76 (46%), Positives = 52/76 (68%)
 Frame = +1

Query: 4   MAKVLQHIIHEAQSVFVEGRSMVENIHIAQELIAKYARKRISPRYLIKVDIRKEYDFVSW 183
           MA V+  +I+EAQ+ F+ G+ + +NI +A ELI  Y++K +SPR +IKVD+RK YD + W
Sbjct: 1   MAVVIGEVINEAQAGFIPGKHIGDNILLATELIKGYSQKAVSPRCMIKVDLRKAYDSIEW 60

Query: 184 IFLRSTMLRLSFPQLF 231
            FL+  +  L FP  F
Sbjct: 61  SFLQCMLSELGFPSQF 76


>ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulgaris subsp. maritima]
           gi|346683183|ref|YP_004842114.1| hypothetical protein
           BemaM_p069 [Beta macrocarpa]
           gi|319439824|emb|CBX33299.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500101|emb|CBX24919.1|
           hypothetical protein [Beta macrocarpa]
          Length = 238

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/76 (46%), Positives = 52/76 (68%)
 Frame = +1

Query: 4   MAKVLQHIIHEAQSVFVEGRSMVENIHIAQELIAKYARKRISPRYLIKVDIRKEYDFVSW 183
           MA V+  +I+EAQ+ F+ G+ + +NI +A ELI  Y++K +SPR +IKVD+RK YD + W
Sbjct: 1   MAVVIGEVINEAQAGFIPGKHIGDNILLATELIKGYSQKAVSPRCMIKVDLRKAYDSIEW 60

Query: 184 IFLRSTMLRLSFPQLF 231
            FL+  +  L FP  F
Sbjct: 61  SFLQCMLSELGFPSQF 76


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/77 (44%), Positives = 51/77 (66%)
 Frame = +1

Query: 1   RMAKVLQHIIHEAQSVFVEGRSMVENIHIAQELIAKYARKRISPRYLIKVDIRKEYDFVS 180
           RM  VL  ++ E QS FV+GR + +NI ++ EL+  Y+RK ISPR ++K+D++K Y+ V 
Sbjct: 217 RMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQKAYNSVE 276

Query: 181 WIFLRSTMLRLSFPQLF 231
           W F++  ML L F   F
Sbjct: 277 WPFIKHLMLELGFSYKF 293


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/77 (45%), Positives = 50/77 (64%)
 Frame = +1

Query: 1   RMAKVLQHIIHEAQSVFVEGRSMVENIHIAQELIAKYARKRISPRYLIKVDIRKEYDFVS 180
           R+  V+  ++  AQ+ F+  R + +NI +A ELI  Y R+ +SPR +IKVDIRK YD V 
Sbjct: 537 RLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVE 596

Query: 181 WIFLRSTMLRLSFPQLF 231
           W+FL S +  L FP +F
Sbjct: 597 WVFLESMLKELGFPSMF 613


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