BLASTX nr result

ID: Cephaelis21_contig00052557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052557
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB73912.1| polyprotein [Citrus sinensis]                          158   5e-37
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              154   6e-36
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  154   7e-36
gb|AFB73911.1| polyprotein [Citrus sinensis]                          154   1e-35
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              153   2e-35

>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/95 (81%), Positives = 84/95 (88%)
 Frame = -3

Query: 286  YML*PKGFEEKGKDNLVYRLNKSLYRLKQAPRC*YKRFDAFIMSLGYNRLYTDHCAYYKR 107
            YML P+GF E GK+NLV RLNKSLY LKQAPRC YKRFD+FIMSLGYNRL +DHCAYYKR
Sbjct: 918  YMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCAYYKR 977

Query: 106  IKGDDFVILLLYVDDMLVIGPNKDPIQELKAQLAR 2
             + +DF+ILLLYVDDMLV GPNKD IQELKAQLAR
Sbjct: 978  FEDNDFIILLLYVDDMLVAGPNKDRIQELKAQLAR 1012


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  154 bits (390), Expect = 6e-36
 Identities = 73/95 (76%), Positives = 84/95 (88%)
 Frame = -3

Query: 286  YML*PKGFEEKGKDNLVYRLNKSLYRLKQAPRC*YKRFDAFIMSLGYNRLYTDHCAYYKR 107
            YML P+GF+E+GK+NLV RL KSLY LKQAPRC YKRFD+FI+SL YNRL +DHC YYKR
Sbjct: 914  YMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKR 973

Query: 106  IKGDDFVILLLYVDDMLVIGPNKDPIQELKAQLAR 2
              G+DF+ILLLYVDDMLV+GPNKD +QELKAQLAR
Sbjct: 974  FDGNDFIILLLYVDDMLVVGPNKDRVQELKAQLAR 1008


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  154 bits (389), Expect = 7e-36
 Identities = 74/95 (77%), Positives = 82/95 (86%)
 Frame = -3

Query: 286  YML*PKGFEEKGKDNLVYRLNKSLYRLKQAPRC*YKRFDAFIMSLGYNRLYTDHCAYYKR 107
            YML P+GFEEK ++NLV RL KSLY LKQAPRC YKRFD+FIMSLGYNRL +DHC YYKR
Sbjct: 914  YMLQPEGFEEKERENLVCRLTKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCTYYKR 973

Query: 106  IKGDDFVILLLYVDDMLVIGPNKDPIQELKAQLAR 2
                DF+ILLLYVDDMLV+GPNKD +QELKAQLAR
Sbjct: 974  FDDGDFIILLLYVDDMLVVGPNKDRVQELKAQLAR 1008


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  154 bits (388), Expect = 1e-35
 Identities = 76/95 (80%), Positives = 83/95 (87%)
 Frame = -3

Query: 286  YML*PKGFEEKGKDNLVYRLNKSLYRLKQAPRC*YKRFDAFIMSLGYNRLYTDHCAYYKR 107
            YML P+GF E GK+NLV RLNKSLY LKQAPR  YKRFD+FIMSLGYNRL +DHCAYYKR
Sbjct: 918  YMLQPEGFAETGKENLVCRLNKSLYGLKQAPRYWYKRFDSFIMSLGYNRLSSDHCAYYKR 977

Query: 106  IKGDDFVILLLYVDDMLVIGPNKDPIQELKAQLAR 2
             + +DF+ILLLYVDDMLV GPNKD IQELKAQLAR
Sbjct: 978  FEDNDFIILLLYVDDMLVAGPNKDRIQELKAQLAR 1012


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  153 bits (386), Expect = 2e-35
 Identities = 72/95 (75%), Positives = 84/95 (88%)
 Frame = -3

Query: 286  YML*PKGFEEKGKDNLVYRLNKSLYRLKQAPRC*YKRFDAFIMSLGYNRLYTDHCAYYKR 107
            YML P+GF+E+GK+NLV RL KSLY LKQAPRC YKRFD+FI+SL YNRL +DHC YYKR
Sbjct: 914  YMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKR 973

Query: 106  IKGDDFVILLLYVDDMLVIGPNKDPIQELKAQLAR 2
              G+DF+ILLLYVDD+LV+GPNKD +QELKAQLAR
Sbjct: 974  FDGNDFIILLLYVDDILVVGPNKDRVQELKAQLAR 1008


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